data_6T2T # _model_server_result.job_id t2Irz3NqRlIPVptW0BTVUQ _model_server_result.datetime_utc '2025-01-10 08:46:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6t2t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6T2T # _exptl.entry_id 6T2T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-2-METHYL-2,4-PENTANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6T2T _cell.length_a 76.201 _cell.length_b 76.201 _cell.length_c 100.65 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6T2T _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id MPD _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-2-METHYL-2,4-PENTANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MPD sing 273 n n C1 H11 MPD sing 274 n n C1 H12 MPD sing 275 n n C1 H13 MPD sing 276 n n C2 O2 MPD sing 277 n n C2 CM MPD sing 278 n n C2 C3 MPD sing 279 n n O2 HO2 MPD sing 280 n n CM HM1 MPD sing 281 n n CM HM2 MPD sing 282 n n CM HM3 MPD sing 283 n n C3 C4 MPD sing 284 n n C3 H31 MPD sing 285 n n C3 H32 MPD sing 286 n n C4 O4 MPD sing 287 n n C4 C5 MPD sing 288 n n C4 H4 MPD sing 289 n n O4 HO4 MPD sing 290 n n C5 H51 MPD sing 291 n n C5 H52 MPD sing 292 n n C5 H53 MPD sing 293 n n # _atom_sites.entry_id 6T2T _atom_sites.fract_transf_matrix[1][1] 0.013123 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013123 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009935 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GSH A 1 301 301 GSH GSH . C 3 MPD A 1 302 401 MPD MPD . D 4 HOH A 1 401 234 HOH HOH . D 4 HOH A 2 402 276 HOH HOH . D 4 HOH A 3 403 159 HOH HOH . D 4 HOH A 4 404 260 HOH HOH . D 4 HOH A 5 405 199 HOH HOH . D 4 HOH A 6 406 249 HOH HOH . D 4 HOH A 7 407 174 HOH HOH . D 4 HOH A 8 408 200 HOH HOH . D 4 HOH A 9 409 265 HOH HOH . D 4 HOH A 10 410 164 HOH HOH . D 4 HOH A 11 411 76 HOH HOH . D 4 HOH A 12 412 88 HOH HOH . D 4 HOH A 13 413 198 HOH HOH . D 4 HOH A 14 414 135 HOH HOH . D 4 HOH A 15 415 20 HOH HOH . D 4 HOH A 16 416 77 HOH HOH . D 4 HOH A 17 417 100 HOH HOH . D 4 HOH A 18 418 157 HOH HOH . D 4 HOH A 19 419 90 HOH HOH . D 4 HOH A 20 420 202 HOH HOH . D 4 HOH A 21 421 63 HOH HOH . D 4 HOH A 22 422 146 HOH HOH . D 4 HOH A 23 423 49 HOH HOH . D 4 HOH A 24 424 185 HOH HOH . D 4 HOH A 25 425 74 HOH HOH . D 4 HOH A 26 426 79 HOH HOH . D 4 HOH A 27 427 113 HOH HOH . D 4 HOH A 28 428 181 HOH HOH . D 4 HOH A 29 429 226 HOH HOH . D 4 HOH A 30 430 215 HOH HOH . D 4 HOH A 31 431 55 HOH HOH . D 4 HOH A 32 432 112 HOH HOH . D 4 HOH A 33 433 166 HOH HOH . D 4 HOH A 34 434 217 HOH HOH . D 4 HOH A 35 435 270 HOH HOH . D 4 HOH A 36 436 145 HOH HOH . D 4 HOH A 37 437 91 HOH HOH . D 4 HOH A 38 438 69 HOH HOH . D 4 HOH A 39 439 105 HOH HOH . D 4 HOH A 40 440 41 HOH HOH . D 4 HOH A 41 441 153 HOH HOH . D 4 HOH A 42 442 70 HOH HOH . D 4 HOH A 43 443 118 HOH HOH . D 4 HOH A 44 444 86 HOH HOH . D 4 HOH A 45 445 163 HOH HOH . D 4 HOH A 46 446 25 HOH HOH . D 4 HOH A 47 447 103 HOH HOH . D 4 HOH A 48 448 165 HOH HOH . D 4 HOH A 49 449 155 HOH HOH . D 4 HOH A 50 450 241 HOH HOH . D 4 HOH A 51 451 179 HOH HOH . D 4 HOH A 52 452 42 HOH HOH . D 4 HOH A 53 453 117 HOH HOH . D 4 HOH A 54 454 180 HOH HOH . D 4 HOH A 55 455 230 HOH HOH . D 4 HOH A 56 456 229 HOH HOH . D 4 HOH A 57 457 206 HOH HOH . D 4 HOH A 58 458 2 HOH HOH . D 4 HOH A 59 459 97 HOH HOH . D 4 HOH A 60 460 178 HOH HOH . D 4 HOH A 61 461 158 HOH HOH . D 4 HOH A 62 462 15 HOH HOH . D 4 HOH A 63 463 13 HOH HOH . D 4 HOH A 64 464 44 HOH HOH . D 4 HOH A 65 465 5 HOH HOH . D 4 HOH A 66 466 21 HOH HOH . D 4 HOH A 67 467 268 HOH HOH . D 4 HOH A 68 468 48 HOH HOH . D 4 HOH A 69 469 7 HOH HOH . D 4 HOH A 70 470 28 HOH HOH . D 4 HOH A 71 471 24 HOH HOH . D 4 HOH A 72 472 1 HOH HOH . D 4 HOH A 73 473 8 HOH HOH . D 4 HOH A 74 474 254 HOH HOH . D 4 HOH A 75 475 14 HOH HOH . D 4 HOH A 76 476 52 HOH HOH . D 4 HOH A 77 477 38 HOH HOH . D 4 HOH A 78 478 221 HOH HOH . D 4 HOH A 79 479 45 HOH HOH . D 4 HOH A 80 480 66 HOH HOH . D 4 HOH A 81 481 34 HOH HOH . D 4 HOH A 82 482 208 HOH HOH . D 4 HOH A 83 483 144 HOH HOH . D 4 HOH A 84 484 36 HOH HOH . D 4 HOH A 85 485 197 HOH HOH . D 4 HOH A 86 486 87 HOH HOH . D 4 HOH A 87 487 11 HOH HOH . D 4 HOH A 88 488 138 HOH HOH . D 4 HOH A 89 489 6 HOH HOH . D 4 HOH A 90 490 71 HOH HOH . D 4 HOH A 91 491 209 HOH HOH . D 4 HOH A 92 492 168 HOH HOH . D 4 HOH A 93 493 220 HOH HOH . D 4 HOH A 94 494 75 HOH HOH . D 4 HOH A 95 495 192 HOH HOH . D 4 HOH A 96 496 30 HOH HOH . D 4 HOH A 97 497 46 HOH HOH . D 4 HOH A 98 498 167 HOH HOH . D 4 HOH A 99 499 267 HOH HOH . D 4 HOH A 100 500 136 HOH HOH . D 4 HOH A 101 501 148 HOH HOH . D 4 HOH A 102 502 149 HOH HOH . D 4 HOH A 103 503 152 HOH HOH . D 4 HOH A 104 504 205 HOH HOH . D 4 HOH A 105 505 127 HOH HOH . D 4 HOH A 106 506 210 HOH HOH . D 4 HOH A 107 507 259 HOH HOH . D 4 HOH A 108 508 141 HOH HOH . D 4 HOH A 109 509 224 HOH HOH . D 4 HOH A 110 510 22 HOH HOH . D 4 HOH A 111 511 219 HOH HOH . D 4 HOH A 112 512 187 HOH HOH . D 4 HOH A 113 513 62 HOH HOH . D 4 HOH A 114 514 27 HOH HOH . D 4 HOH A 115 515 3 HOH HOH . D 4 HOH A 116 516 111 HOH HOH . D 4 HOH A 117 517 9 HOH HOH . D 4 HOH A 118 518 19 HOH HOH . D 4 HOH A 119 519 56 HOH HOH . D 4 HOH A 120 520 147 HOH HOH . D 4 HOH A 121 521 82 HOH HOH . D 4 HOH A 122 522 119 HOH HOH . D 4 HOH A 123 523 255 HOH HOH . D 4 HOH A 124 524 80 HOH HOH . D 4 HOH A 125 525 213 HOH HOH . D 4 HOH A 126 526 64 HOH HOH . D 4 HOH A 127 527 204 HOH HOH . D 4 HOH A 128 528 223 HOH HOH . D 4 HOH A 129 529 184 HOH HOH . D 4 HOH A 130 530 54 HOH HOH . D 4 HOH A 131 531 17 HOH HOH . D 4 HOH A 132 532 104 HOH HOH . D 4 HOH A 133 533 18 HOH HOH . D 4 HOH A 134 534 227 HOH HOH . D 4 HOH A 135 535 140 HOH HOH . D 4 HOH A 136 536 212 HOH HOH . D 4 HOH A 137 537 214 HOH HOH . D 4 HOH A 138 538 189 HOH HOH . D 4 HOH A 139 539 31 HOH HOH . D 4 HOH A 140 540 272 HOH HOH . D 4 HOH A 141 541 169 HOH HOH . D 4 HOH A 142 542 195 HOH HOH . D 4 HOH A 143 543 107 HOH HOH . D 4 HOH A 144 544 84 HOH HOH . D 4 HOH A 145 545 194 HOH HOH . D 4 HOH A 146 546 16 HOH HOH . D 4 HOH A 147 547 151 HOH HOH . D 4 HOH A 148 548 126 HOH HOH . D 4 HOH A 149 549 252 HOH HOH . D 4 HOH A 150 550 33 HOH HOH . D 4 HOH A 151 551 40 HOH HOH . D 4 HOH A 152 552 68 HOH HOH . D 4 HOH A 153 553 109 HOH HOH . D 4 HOH A 154 554 12 HOH HOH . D 4 HOH A 155 555 73 HOH HOH . D 4 HOH A 156 556 161 HOH HOH . D 4 HOH A 157 557 201 HOH HOH . D 4 HOH A 158 558 207 HOH HOH . D 4 HOH A 159 559 51 HOH HOH . D 4 HOH A 160 560 89 HOH HOH . D 4 HOH A 161 561 78 HOH HOH . D 4 HOH A 162 562 35 HOH HOH . D 4 HOH A 163 563 143 HOH HOH . D 4 HOH A 164 564 39 HOH HOH . D 4 HOH A 165 565 186 HOH HOH . D 4 HOH A 166 566 95 HOH HOH . D 4 HOH A 167 567 251 HOH HOH . D 4 HOH A 168 568 115 HOH HOH . D 4 HOH A 169 569 85 HOH HOH . D 4 HOH A 170 570 81 HOH HOH . D 4 HOH A 171 571 53 HOH HOH . D 4 HOH A 172 572 60 HOH HOH . D 4 HOH A 173 573 94 HOH HOH . D 4 HOH A 174 574 57 HOH HOH . D 4 HOH A 175 575 228 HOH HOH . D 4 HOH A 176 576 37 HOH HOH . D 4 HOH A 177 577 43 HOH HOH . D 4 HOH A 178 578 191 HOH HOH . D 4 HOH A 179 579 4 HOH HOH . D 4 HOH A 180 580 150 HOH HOH . D 4 HOH A 181 581 203 HOH HOH . D 4 HOH A 182 582 218 HOH HOH . D 4 HOH A 183 583 271 HOH HOH . D 4 HOH A 184 584 108 HOH HOH . D 4 HOH A 185 585 29 HOH HOH . D 4 HOH A 186 586 162 HOH HOH . D 4 HOH A 187 587 258 HOH HOH . D 4 HOH A 188 588 32 HOH HOH . D 4 HOH A 189 589 124 HOH HOH . D 4 HOH A 190 590 235 HOH HOH . D 4 HOH A 191 591 196 HOH HOH . D 4 HOH A 192 592 278 HOH HOH . D 4 HOH A 193 593 47 HOH HOH . D 4 HOH A 194 594 23 HOH HOH . D 4 HOH A 195 595 173 HOH HOH . D 4 HOH A 196 596 248 HOH HOH . D 4 HOH A 197 597 242 HOH HOH . D 4 HOH A 198 598 256 HOH HOH . D 4 HOH A 199 599 160 HOH HOH . D 4 HOH A 200 600 99 HOH HOH . D 4 HOH A 201 601 245 HOH HOH . D 4 HOH A 202 602 236 HOH HOH . D 4 HOH A 203 603 130 HOH HOH . D 4 HOH A 204 604 172 HOH HOH . D 4 HOH A 205 605 188 HOH HOH . D 4 HOH A 206 606 232 HOH HOH . D 4 HOH A 207 607 238 HOH HOH . D 4 HOH A 208 608 125 HOH HOH . D 4 HOH A 209 609 176 HOH HOH . D 4 HOH A 210 610 59 HOH HOH . D 4 HOH A 211 611 233 HOH HOH . D 4 HOH A 212 612 123 HOH HOH . D 4 HOH A 213 613 102 HOH HOH . D 4 HOH A 214 614 50 HOH HOH . D 4 HOH A 215 615 225 HOH HOH . D 4 HOH A 216 616 253 HOH HOH . D 4 HOH A 217 617 83 HOH HOH . D 4 HOH A 218 618 128 HOH HOH . D 4 HOH A 219 619 156 HOH HOH . D 4 HOH A 220 620 190 HOH HOH . D 4 HOH A 221 621 133 HOH HOH . D 4 HOH A 222 622 131 HOH HOH . D 4 HOH A 223 623 101 HOH HOH . D 4 HOH A 224 624 121 HOH HOH . D 4 HOH A 225 625 92 HOH HOH . D 4 HOH A 226 626 243 HOH HOH . D 4 HOH A 227 627 98 HOH HOH . D 4 HOH A 228 628 257 HOH HOH . D 4 HOH A 229 629 120 HOH HOH . D 4 HOH A 230 630 240 HOH HOH . D 4 HOH A 231 631 61 HOH HOH . D 4 HOH A 232 632 237 HOH HOH . D 4 HOH A 233 633 26 HOH HOH . D 4 HOH A 234 634 72 HOH HOH . D 4 HOH A 235 635 244 HOH HOH . D 4 HOH A 236 636 247 HOH HOH . D 4 HOH A 237 637 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MPD . . . C 3 -7.264 10.659 36.273 0.7 19.89 ? C1 MPD 302 A 1 HETATM 2 C C2 MPD . . . C 3 -7.304 9.595 35.182 0.7 18.24 ? C2 MPD 302 A 1 HETATM 3 O O2 MPD . . . C 3 -5.949 9.435 34.691 0.7 21.79 ? O2 MPD 302 A 1 HETATM 4 C CM MPD . . . C 3 -7.832 8.282 35.729 0.7 19.16 ? CM MPD 302 A 1 HETATM 5 C C3 MPD . . . C 3 -8.178 10 33.991 0.7 17.31 ? C3 MPD 302 A 1 HETATM 6 C C4 MPD . . . C 3 -7.818 11.282 33.302 0.7 15.51 ? C4 MPD 302 A 1 HETATM 7 O O4 MPD . . . C 3 -6.585 11.154 32.554 0.7 16.55 ? O4 MPD 302 A 1 HETATM 8 C C5 MPD . . . C 3 -8.896 11.751 32.398 0.7 15.67 ? C5 MPD 302 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #