data_6T2Y # _model_server_result.job_id ZwgmS7xawnmyiMUySAW-yw _model_server_result.datetime_utc '2024-11-29 03:37:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6t2y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6T2Y # _exptl.entry_id 6T2Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6T2Y _cell.length_a 57.515 _cell.length_b 84.449 _cell.length_c 98.665 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6T2Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 57.515 0 49.3325 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N ? 2 G N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 6T2Y _atom_sites.fract_transf_matrix[1][1] 0.017387 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011841 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010135 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 301 301 EDO EDO . D 3 HL9 A 1 302 401 HL9 HL9 . E 2 EDO A 1 303 501 EDO EDO . F 3 HL9 B 1 201 201 HL9 HL9 . G 2 EDO B 1 202 301 EDO EDO . H 4 HOH A 1 401 1 HOH HOH . H 4 HOH A 2 402 24 HOH HOH . H 4 HOH A 3 403 28 HOH HOH . H 4 HOH A 4 404 42 HOH HOH . H 4 HOH A 5 405 40 HOH HOH . H 4 HOH A 6 406 66 HOH HOH . H 4 HOH A 7 407 18 HOH HOH . H 4 HOH A 8 408 21 HOH HOH . H 4 HOH A 9 409 157 HOH HOH . H 4 HOH A 10 410 15 HOH HOH . H 4 HOH A 11 411 147 HOH HOH . H 4 HOH A 12 412 74 HOH HOH . H 4 HOH A 13 413 103 HOH HOH . H 4 HOH A 14 414 37 HOH HOH . H 4 HOH A 15 415 7 HOH HOH . H 4 HOH A 16 416 8 HOH HOH . H 4 HOH A 17 417 62 HOH HOH . H 4 HOH A 18 418 54 HOH HOH . H 4 HOH A 19 419 55 HOH HOH . H 4 HOH A 20 420 119 HOH HOH . H 4 HOH A 21 421 76 HOH HOH . H 4 HOH A 22 422 3 HOH HOH . H 4 HOH A 23 423 12 HOH HOH . H 4 HOH A 24 424 48 HOH HOH . H 4 HOH A 25 425 51 HOH HOH . H 4 HOH A 26 426 20 HOH HOH . H 4 HOH A 27 427 39 HOH HOH . H 4 HOH A 28 428 109 HOH HOH . H 4 HOH A 29 429 16 HOH HOH . H 4 HOH A 30 430 35 HOH HOH . H 4 HOH A 31 431 63 HOH HOH . H 4 HOH A 32 432 72 HOH HOH . H 4 HOH A 33 433 25 HOH HOH . H 4 HOH A 34 434 19 HOH HOH . H 4 HOH A 35 435 11 HOH HOH . H 4 HOH A 36 436 26 HOH HOH . H 4 HOH A 37 437 47 HOH HOH . H 4 HOH A 38 438 29 HOH HOH . H 4 HOH A 39 439 104 HOH HOH . H 4 HOH A 40 440 38 HOH HOH . H 4 HOH A 41 441 114 HOH HOH . H 4 HOH A 42 442 10 HOH HOH . H 4 HOH A 43 443 14 HOH HOH . H 4 HOH A 44 444 41 HOH HOH . H 4 HOH A 45 445 148 HOH HOH . H 4 HOH A 46 446 34 HOH HOH . H 4 HOH A 47 447 115 HOH HOH . H 4 HOH A 48 448 102 HOH HOH . H 4 HOH A 49 449 9 HOH HOH . H 4 HOH A 50 450 140 HOH HOH . H 4 HOH A 51 451 17 HOH HOH . H 4 HOH A 52 452 142 HOH HOH . H 4 HOH A 53 453 116 HOH HOH . H 4 HOH A 54 454 64 HOH HOH . H 4 HOH A 55 455 85 HOH HOH . H 4 HOH A 56 456 61 HOH HOH . H 4 HOH A 57 457 158 HOH HOH . H 4 HOH A 58 458 145 HOH HOH . H 4 HOH A 59 459 46 HOH HOH . H 4 HOH A 60 460 27 HOH HOH . H 4 HOH A 61 461 120 HOH HOH . H 4 HOH A 62 462 108 HOH HOH . H 4 HOH A 63 463 153 HOH HOH . H 4 HOH A 64 464 149 HOH HOH . H 4 HOH A 65 465 127 HOH HOH . H 4 HOH A 66 466 75 HOH HOH . H 4 HOH A 67 467 113 HOH HOH . H 4 HOH A 68 468 156 HOH HOH . H 4 HOH A 69 469 22 HOH HOH . H 4 HOH A 70 470 65 HOH HOH . H 4 HOH A 71 471 138 HOH HOH . H 4 HOH A 72 472 141 HOH HOH . H 4 HOH A 73 473 143 HOH HOH . H 4 HOH A 74 474 23 HOH HOH . H 4 HOH A 75 475 110 HOH HOH . H 4 HOH A 76 476 73 HOH HOH . H 4 HOH A 77 477 136 HOH HOH . H 4 HOH A 78 478 53 HOH HOH . I 4 HOH B 1 301 123 HOH HOH . I 4 HOH B 2 302 139 HOH HOH . I 4 HOH B 3 303 133 HOH HOH . I 4 HOH B 4 304 88 HOH HOH . I 4 HOH B 5 305 67 HOH HOH . I 4 HOH B 6 306 92 HOH HOH . I 4 HOH B 7 307 96 HOH HOH . I 4 HOH B 8 308 49 HOH HOH . I 4 HOH B 9 309 150 HOH HOH . I 4 HOH B 10 310 90 HOH HOH . I 4 HOH B 11 311 125 HOH HOH . I 4 HOH B 12 312 68 HOH HOH . I 4 HOH B 13 313 5 HOH HOH . I 4 HOH B 14 314 58 HOH HOH . I 4 HOH B 15 315 137 HOH HOH . I 4 HOH B 16 316 84 HOH HOH . I 4 HOH B 17 317 135 HOH HOH . I 4 HOH B 18 318 98 HOH HOH . I 4 HOH B 19 319 57 HOH HOH . I 4 HOH B 20 320 105 HOH HOH . I 4 HOH B 21 321 122 HOH HOH . I 4 HOH B 22 322 82 HOH HOH . I 4 HOH B 23 323 52 HOH HOH . I 4 HOH B 24 324 70 HOH HOH . I 4 HOH B 25 325 94 HOH HOH . I 4 HOH B 26 326 81 HOH HOH . I 4 HOH B 27 327 89 HOH HOH . I 4 HOH B 28 328 4 HOH HOH . I 4 HOH B 29 329 13 HOH HOH . I 4 HOH B 30 330 32 HOH HOH . I 4 HOH B 31 331 31 HOH HOH . I 4 HOH B 32 332 56 HOH HOH . I 4 HOH B 33 333 60 HOH HOH . I 4 HOH B 34 334 118 HOH HOH . I 4 HOH B 35 335 152 HOH HOH . I 4 HOH B 36 336 146 HOH HOH . I 4 HOH B 37 337 100 HOH HOH . I 4 HOH B 38 338 106 HOH HOH . I 4 HOH B 39 339 93 HOH HOH . I 4 HOH B 40 340 50 HOH HOH . I 4 HOH B 41 341 59 HOH HOH . I 4 HOH B 42 342 111 HOH HOH . I 4 HOH B 43 343 45 HOH HOH . I 4 HOH B 44 344 107 HOH HOH . I 4 HOH B 45 345 83 HOH HOH . I 4 HOH B 46 346 80 HOH HOH . I 4 HOH B 47 347 91 HOH HOH . I 4 HOH B 48 348 159 HOH HOH . I 4 HOH B 49 349 99 HOH HOH . I 4 HOH B 50 350 129 HOH HOH . I 4 HOH B 51 351 86 HOH HOH . I 4 HOH B 52 352 87 HOH HOH . I 4 HOH B 53 353 95 HOH HOH . I 4 HOH B 54 354 30 HOH HOH . I 4 HOH B 55 355 121 HOH HOH . I 4 HOH B 56 356 132 HOH HOH . I 4 HOH B 57 357 112 HOH HOH . I 4 HOH B 58 358 154 HOH HOH . I 4 HOH B 59 359 134 HOH HOH . I 4 HOH B 60 360 124 HOH HOH . I 4 HOH B 61 361 144 HOH HOH . I 4 HOH B 62 362 151 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . A . C 2 13.038 2.503 6.68 0.48 41.8 ? C1 EDO 301 A 1 HETATM 2 C C1 EDO . B . C 2 12.517 3.17 7.685 0.52 40.96 ? C1 EDO 301 A 1 HETATM 3 O O1 EDO . A . C 2 13.591 3.649 6.029 0.48 42.1 ? O1 EDO 301 A 1 HETATM 4 O O1 EDO . B . C 2 11.747 2.977 8.878 0.52 40.33 ? O1 EDO 301 A 1 HETATM 5 C C2 EDO . A . C 2 13.071 1.316 5.725 0.48 40.88 ? C2 EDO 301 A 1 HETATM 6 C C2 EDO . B . C 2 12.377 1.943 6.79 0.52 41.66 ? C2 EDO 301 A 1 HETATM 7 O O2 EDO . A . C 2 12.762 0.114 6.44 0.48 40.61 ? O2 EDO 301 A 1 HETATM 8 O O2 EDO . B . C 2 12.768 0.773 7.52 0.52 40.97 ? O2 EDO 301 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #