data_6T30 # _model_server_result.job_id c3olDWdDpCu7-Z6IGadPpA _model_server_result.datetime_utc '2024-11-17 09:48:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6t30 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":203}' # _entry.id 6T30 # _exptl.entry_id 6T30 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6T30 _cell.length_a 55.132 _cell.length_b 55.132 _cell.length_c 131.209 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6T30 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -43.736333 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 125 n n C1 C2 GOL sing 126 n n C1 H11 GOL sing 127 n n C1 H12 GOL sing 128 n n O1 HO1 GOL sing 129 n n C2 O2 GOL sing 130 n n C2 C3 GOL sing 131 n n C2 H2 GOL sing 132 n n O2 HO2 GOL sing 133 n n C3 O3 GOL sing 134 n n C3 H31 GOL sing 135 n n C3 H32 GOL sing 136 n n O3 HO3 GOL sing 137 n n # _atom_sites.entry_id 6T30 _atom_sites.fract_transf_matrix[1][1] 0.018138 _atom_sites.fract_transf_matrix[1][2] 0.010472 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020944 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007621 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HL9 B 1 201 201 HL9 HL9 . D 3 EDO B 1 202 301 EDO EDO . E 3 EDO B 1 203 201 EDO EDO . F 2 HL9 A 1 201 201 HL9 HL9 . G 3 EDO A 1 202 401 EDO EDO . H 4 GOL A 1 203 501 GOL GOL . I 5 HOH B 1 301 45 HOH HOH . I 5 HOH B 2 302 93 HOH HOH . I 5 HOH B 3 303 55 HOH HOH . I 5 HOH B 4 304 102 HOH HOH . I 5 HOH B 5 305 67 HOH HOH . I 5 HOH B 6 306 36 HOH HOH . I 5 HOH B 7 307 46 HOH HOH . I 5 HOH B 8 308 35 HOH HOH . I 5 HOH B 9 309 56 HOH HOH . I 5 HOH B 10 310 48 HOH HOH . I 5 HOH B 11 311 52 HOH HOH . I 5 HOH B 12 312 85 HOH HOH . I 5 HOH B 13 313 72 HOH HOH . I 5 HOH B 14 314 121 HOH HOH . I 5 HOH B 15 315 17 HOH HOH . I 5 HOH B 16 316 64 HOH HOH . I 5 HOH B 17 317 81 HOH HOH . I 5 HOH B 18 318 59 HOH HOH . I 5 HOH B 19 319 3 HOH HOH . I 5 HOH B 20 320 57 HOH HOH . I 5 HOH B 21 321 53 HOH HOH . I 5 HOH B 22 322 30 HOH HOH . I 5 HOH B 23 323 32 HOH HOH . I 5 HOH B 24 324 97 HOH HOH . I 5 HOH B 25 325 66 HOH HOH . I 5 HOH B 26 326 110 HOH HOH . I 5 HOH B 27 327 98 HOH HOH . I 5 HOH B 28 328 99 HOH HOH . I 5 HOH B 29 329 43 HOH HOH . I 5 HOH B 30 330 77 HOH HOH . I 5 HOH B 31 331 120 HOH HOH . I 5 HOH B 32 332 47 HOH HOH . I 5 HOH B 33 333 96 HOH HOH . I 5 HOH B 34 334 208 HOH HOH . I 5 HOH B 35 335 4 HOH HOH . I 5 HOH B 36 336 73 HOH HOH . I 5 HOH B 37 337 51 HOH HOH . I 5 HOH B 38 338 49 HOH HOH . I 5 HOH B 39 339 41 HOH HOH . I 5 HOH B 40 340 22 HOH HOH . I 5 HOH B 41 341 65 HOH HOH . I 5 HOH B 42 342 86 HOH HOH . I 5 HOH B 43 343 12 HOH HOH . I 5 HOH B 44 344 20 HOH HOH . I 5 HOH B 45 345 119 HOH HOH . I 5 HOH B 46 346 101 HOH HOH . I 5 HOH B 47 347 84 HOH HOH . I 5 HOH B 48 348 206 HOH HOH . I 5 HOH B 49 349 95 HOH HOH . I 5 HOH B 50 350 207 HOH HOH . I 5 HOH B 51 351 6 HOH HOH . I 5 HOH B 52 352 26 HOH HOH . I 5 HOH B 53 353 123 HOH HOH . I 5 HOH B 54 354 39 HOH HOH . I 5 HOH B 55 355 209 HOH HOH . I 5 HOH B 56 356 50 HOH HOH . I 5 HOH B 57 357 83 HOH HOH . I 5 HOH B 58 358 205 HOH HOH . J 5 HOH A 1 301 70 HOH HOH . J 5 HOH A 2 302 103 HOH HOH . J 5 HOH A 3 303 69 HOH HOH . J 5 HOH A 4 304 34 HOH HOH . J 5 HOH A 5 305 91 HOH HOH . J 5 HOH A 6 306 107 HOH HOH . J 5 HOH A 7 307 62 HOH HOH . J 5 HOH A 8 308 211 HOH HOH . J 5 HOH A 9 309 106 HOH HOH . J 5 HOH A 10 310 54 HOH HOH . J 5 HOH A 11 311 68 HOH HOH . J 5 HOH A 12 312 79 HOH HOH . J 5 HOH A 13 313 122 HOH HOH . J 5 HOH A 14 314 76 HOH HOH . J 5 HOH A 15 315 105 HOH HOH . J 5 HOH A 16 316 18 HOH HOH . J 5 HOH A 17 317 90 HOH HOH . J 5 HOH A 18 318 61 HOH HOH . J 5 HOH A 19 319 58 HOH HOH . J 5 HOH A 20 320 19 HOH HOH . J 5 HOH A 21 321 23 HOH HOH . J 5 HOH A 22 322 25 HOH HOH . J 5 HOH A 23 323 13 HOH HOH . J 5 HOH A 24 324 38 HOH HOH . J 5 HOH A 25 325 117 HOH HOH . J 5 HOH A 26 326 88 HOH HOH . J 5 HOH A 27 327 21 HOH HOH . J 5 HOH A 28 328 33 HOH HOH . J 5 HOH A 29 329 80 HOH HOH . J 5 HOH A 30 330 37 HOH HOH . J 5 HOH A 31 331 16 HOH HOH . J 5 HOH A 32 332 2 HOH HOH . J 5 HOH A 33 333 27 HOH HOH . J 5 HOH A 34 334 24 HOH HOH . J 5 HOH A 35 335 109 HOH HOH . J 5 HOH A 36 336 108 HOH HOH . J 5 HOH A 37 337 75 HOH HOH . J 5 HOH A 38 338 44 HOH HOH . J 5 HOH A 39 339 87 HOH HOH . J 5 HOH A 40 340 104 HOH HOH . J 5 HOH A 41 341 60 HOH HOH . J 5 HOH A 42 342 10 HOH HOH . J 5 HOH A 43 343 78 HOH HOH . J 5 HOH A 44 344 63 HOH HOH . J 5 HOH A 45 345 15 HOH HOH . J 5 HOH A 46 346 29 HOH HOH . J 5 HOH A 47 347 14 HOH HOH . J 5 HOH A 48 348 202 HOH HOH . J 5 HOH A 49 349 92 HOH HOH . J 5 HOH A 50 350 40 HOH HOH . J 5 HOH A 51 351 11 HOH HOH . J 5 HOH A 52 352 74 HOH HOH . J 5 HOH A 53 353 113 HOH HOH . J 5 HOH A 54 354 116 HOH HOH . J 5 HOH A 55 355 118 HOH HOH . J 5 HOH A 56 356 203 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 4 9.705 -8.058 -11.087 1 65.1 ? C1 GOL 203 A 1 HETATM 2 O O1 GOL . . . H 4 8.65 -8.891 -11.449 1 63.54 ? O1 GOL 203 A 1 HETATM 3 C C2 GOL . . . H 4 10.561 -7.86 -12.348 1 66.06 ? C2 GOL 203 A 1 HETATM 4 O O2 GOL . . . H 4 10.801 -9.105 -13.018 1 65.43 ? O2 GOL 203 A 1 HETATM 5 C C3 GOL . . . H 4 9.755 -6.803 -13.194 1 66.99 ? C3 GOL 203 A 1 HETATM 6 O O3 GOL . . . H 4 10.639 -5.726 -13.6 1 68.88 ? O3 GOL 203 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 6 #