data_6T3E # _model_server_result.job_id siBedyXv8108a1YmZ7bE6Q _model_server_result.datetime_utc '2025-04-21 15:56:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6t3e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 6T3E # _exptl.entry_id 6T3E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 115.13 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PROLINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.906 _cell.angle_gamma 90 _cell.entry_id 6T3E _cell.length_a 82.688 _cell.length_b 51.509 _cell.length_c 92.29 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6T3E _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C5 H9 N O2' _chem_comp.formula_weight 115.13 _chem_comp.id PRO _chem_comp.mon_nstd_flag y _chem_comp.name PROLINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PRO sing 337 n n N CD PRO sing 338 n n N H PRO sing 339 n n CA C PRO sing 340 n n CA CB PRO sing 341 n n CA HA PRO sing 342 n n C O PRO doub 343 n n C OXT PRO sing 344 n n CB CG PRO sing 345 n n CB HB2 PRO sing 346 n n CB HB3 PRO sing 347 n n CG CD PRO sing 348 n n CG HG2 PRO sing 349 n n CG HG3 PRO sing 350 n n CD HD2 PRO sing 351 n n CD HD3 PRO sing 352 n n OXT HXT PRO sing 353 n n # _atom_sites.entry_id 6T3E _atom_sites.fract_transf_matrix[1][1] 0.012094 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005874 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019414 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012046 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PRO A 1 401 1 PRO PRO . D 3 NAI A 1 402 1 NAI NAI . E 2 PRO B 1 401 1 PRO PRO . F 3 NAI B 1 402 1 NAI NAI . G 4 HOH A 1 501 44 HOH HOH . G 4 HOH A 2 502 45 HOH HOH . G 4 HOH A 3 503 116 HOH HOH . G 4 HOH A 4 504 118 HOH HOH . G 4 HOH A 5 505 46 HOH HOH . G 4 HOH A 6 506 13 HOH HOH . G 4 HOH A 7 507 120 HOH HOH . G 4 HOH A 8 508 2 HOH HOH . G 4 HOH A 9 509 77 HOH HOH . H 4 HOH B 1 501 65 HOH HOH . H 4 HOH B 2 502 43 HOH HOH . H 4 HOH B 3 503 70 HOH HOH . H 4 HOH B 4 504 1 HOH HOH . H 4 HOH B 5 505 122 HOH HOH . H 4 HOH B 6 506 62 HOH HOH . H 4 HOH B 7 507 6 HOH HOH . H 4 HOH B 8 508 42 HOH HOH . H 4 HOH B 9 509 12 HOH HOH . H 4 HOH B 10 510 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PRO . . . E 2 28.738 -2.834 -14.295 1 45.38 ? N PRO 401 B 1 HETATM 2 C CA PRO . . . E 2 27.743 -3.868 -14.599 1 46.29 ? CA PRO 401 B 1 HETATM 3 C C PRO . . . E 2 26.305 -3.484 -14.264 1 50.98 ? C PRO 401 B 1 HETATM 4 O O PRO . . . E 2 25.946 -2.305 -14.128 1 51.27 ? O PRO 401 B 1 HETATM 5 C CB PRO . . . E 2 28.198 -5.037 -13.727 1 44.23 ? CB PRO 401 B 1 HETATM 6 C CG PRO . . . E 2 29.689 -4.901 -13.685 1 43.63 ? CG PRO 401 B 1 HETATM 7 C CD PRO . . . E 2 30.004 -3.419 -13.814 1 45.22 ? CD PRO 401 B 1 HETATM 8 O OXT PRO . . . E 2 25.457 -4.366 -14.118 1 53.03 ? OXT PRO 401 B 1 # _model_server_stats.io_time_ms 133 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 56 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #