data_6T42 # _model_server_result.job_id 8AGJIjwRDCEIQxK2AlYldg _model_server_result.datetime_utc '2025-01-11 04:57:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6t42 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6T42 # _exptl.entry_id 6T42 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 158.281 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DECAN-1-OL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6T42 _cell.length_a 53.145 _cell.length_b 53.145 _cell.length_c 111.41 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6T42 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 AAA CYS 66 1_555 A SG CYS 160 AAA CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 106 AAA CYS 106 1_555 A SG CYS 119 AAA CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? # _chem_comp.formula 'C10 H22 O' _chem_comp.formula_weight 158.281 _chem_comp.id DE1 _chem_comp.mon_nstd_flag . _chem_comp.name DECAN-1-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CAC DE1 sing 83 n n CAA HAA1 DE1 sing 84 n n CAA HAA2 DE1 sing 85 n n CAA HAA3 DE1 sing 86 n n CAC CAE DE1 sing 87 n n CAC HAC1 DE1 sing 88 n n CAC HAC2 DE1 sing 89 n n CAE CAG DE1 sing 90 n n CAE HAE1 DE1 sing 91 n n CAE HAE2 DE1 sing 92 n n CAG CAI DE1 sing 93 n n CAG HAG1 DE1 sing 94 n n CAG HAG2 DE1 sing 95 n n CAI CAK DE1 sing 96 n n CAI HAI1 DE1 sing 97 n n CAI HAI2 DE1 sing 98 n n CAK CAJ DE1 sing 99 n n CAK HAK1 DE1 sing 100 n n CAK HAK2 DE1 sing 101 n n CAJ CAH DE1 sing 102 n n CAJ HAJ1 DE1 sing 103 n n CAJ HAJ2 DE1 sing 104 n n CAH CAF DE1 sing 105 n n CAH HAH1 DE1 sing 106 n n CAH HAH2 DE1 sing 107 n n CAF CAD DE1 sing 108 n n CAF HAF1 DE1 sing 109 n n CAF HAF2 DE1 sing 110 n n CAD OAB DE1 sing 111 n n CAD HAD1 DE1 sing 112 n n CAD HAD2 DE1 sing 113 n n OAB HAB DE1 sing 114 n n # _atom_sites.entry_id 6T42 _atom_sites.fract_transf_matrix[1][1] 0.018816 _atom_sites.fract_transf_matrix[1][2] 0.010864 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021727 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008976 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DE1 AAA 1 201 201 DE1 DE1 . C 3 HOH AAA 1 301 301 HOH HOH . C 3 HOH AAA 2 302 1 HOH HOH . C 3 HOH AAA 3 303 309 HOH HOH . C 3 HOH AAA 4 304 315 HOH HOH . C 3 HOH AAA 5 305 308 HOH HOH . C 3 HOH AAA 6 306 11 HOH HOH . C 3 HOH AAA 7 307 326 HOH HOH . C 3 HOH AAA 8 308 305 HOH HOH . C 3 HOH AAA 9 309 304 HOH HOH . C 3 HOH AAA 10 310 312 HOH HOH . C 3 HOH AAA 11 311 351 HOH HOH . C 3 HOH AAA 12 312 3 HOH HOH . C 3 HOH AAA 13 313 314 HOH HOH . C 3 HOH AAA 14 314 9 HOH HOH . C 3 HOH AAA 15 315 4 HOH HOH . C 3 HOH AAA 16 316 318 HOH HOH . C 3 HOH AAA 17 317 339 HOH HOH . C 3 HOH AAA 18 318 346 HOH HOH . C 3 HOH AAA 19 319 349 HOH HOH . C 3 HOH AAA 20 320 330 HOH HOH . C 3 HOH AAA 21 321 329 HOH HOH . C 3 HOH AAA 22 322 311 HOH HOH . C 3 HOH AAA 23 323 333 HOH HOH . C 3 HOH AAA 24 324 334 HOH HOH . C 3 HOH AAA 25 325 359 HOH HOH . C 3 HOH AAA 26 326 371 HOH HOH . C 3 HOH AAA 27 327 319 HOH HOH . C 3 HOH AAA 28 328 345 HOH HOH . C 3 HOH AAA 29 329 341 HOH HOH . C 3 HOH AAA 30 330 353 HOH HOH . C 3 HOH AAA 31 331 310 HOH HOH . C 3 HOH AAA 32 332 323 HOH HOH . C 3 HOH AAA 33 333 324 HOH HOH . C 3 HOH AAA 34 334 302 HOH HOH . C 3 HOH AAA 35 335 2 HOH HOH . C 3 HOH AAA 36 336 331 HOH HOH . C 3 HOH AAA 37 337 332 HOH HOH . C 3 HOH AAA 38 338 340 HOH HOH . C 3 HOH AAA 39 339 325 HOH HOH . C 3 HOH AAA 40 340 322 HOH HOH . C 3 HOH AAA 41 341 358 HOH HOH . C 3 HOH AAA 42 342 352 HOH HOH . C 3 HOH AAA 43 343 313 HOH HOH . C 3 HOH AAA 44 344 307 HOH HOH . C 3 HOH AAA 45 345 335 HOH HOH . C 3 HOH AAA 46 346 321 HOH HOH . C 3 HOH AAA 47 347 355 HOH HOH . C 3 HOH AAA 48 348 362 HOH HOH . C 3 HOH AAA 49 349 373 HOH HOH . C 3 HOH AAA 50 350 337 HOH HOH . C 3 HOH AAA 51 351 338 HOH HOH . C 3 HOH AAA 52 352 343 HOH HOH . C 3 HOH AAA 53 353 365 HOH HOH . C 3 HOH AAA 54 354 342 HOH HOH . C 3 HOH AAA 55 355 327 HOH HOH . C 3 HOH AAA 56 356 6 HOH HOH . C 3 HOH AAA 57 357 350 HOH HOH . C 3 HOH AAA 58 358 360 HOH HOH . C 3 HOH AAA 59 359 368 HOH HOH . C 3 HOH AAA 60 360 347 HOH HOH . C 3 HOH AAA 61 361 357 HOH HOH . C 3 HOH AAA 62 362 361 HOH HOH . C 3 HOH AAA 63 363 372 HOH HOH . C 3 HOH AAA 64 364 366 HOH HOH . C 3 HOH AAA 65 365 375 HOH HOH . C 3 HOH AAA 66 366 367 HOH HOH . C 3 HOH AAA 67 367 356 HOH HOH . C 3 HOH AAA 68 368 370 HOH HOH . C 3 HOH AAA 69 369 364 HOH HOH . C 3 HOH AAA 70 370 379 HOH HOH . C 3 HOH AAA 71 371 380 HOH HOH . C 3 HOH AAA 72 372 383 HOH HOH . C 3 HOH AAA 73 373 374 HOH HOH . C 3 HOH AAA 74 374 381 HOH HOH . C 3 HOH AAA 75 375 306 HOH HOH . C 3 HOH AAA 76 376 387 HOH HOH . C 3 HOH AAA 77 377 400 HOH HOH . C 3 HOH AAA 78 378 388 HOH HOH . C 3 HOH AAA 79 379 392 HOH HOH . C 3 HOH AAA 80 380 12 HOH HOH . C 3 HOH AAA 81 381 13 HOH HOH . C 3 HOH AAA 82 382 397 HOH HOH . C 3 HOH AAA 83 383 344 HOH HOH . C 3 HOH AAA 84 384 10 HOH HOH . C 3 HOH AAA 85 385 354 HOH HOH . C 3 HOH AAA 86 386 405 HOH HOH . C 3 HOH AAA 87 387 15 HOH HOH . C 3 HOH AAA 88 388 14 HOH HOH . C 3 HOH AAA 89 389 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA DE1 . . . B 2 -17.111 5.122 -0.842 1 44.87 ? CAA DE1 201 AAA 1 HETATM 2 C CAC DE1 . . . B 2 -15.729 5.037 -1.429 1 52.98 ? CAC DE1 201 AAA 1 HETATM 3 C CAE DE1 . . . B 2 -14.606 5.028 -0.416 1 33.29 ? CAE DE1 201 AAA 1 HETATM 4 C CAG DE1 . . . B 2 -13.692 3.847 -0.606 1 34.25 ? CAG DE1 201 AAA 1 HETATM 5 C CAI DE1 . . . B 2 -12.39 3.897 0.141 1 27.97 ? CAI DE1 201 AAA 1 HETATM 6 C CAK DE1 . . . B 2 -11.556 2.666 -0.074 1 40.91 ? CAK DE1 201 AAA 1 HETATM 7 C CAJ DE1 . . . B 2 -10.21 2.692 0.595 1 48.24 ? CAJ DE1 201 AAA 1 HETATM 8 C CAH DE1 . . . B 2 -9.264 1.65 0.058 1 58.08 ? CAH DE1 201 AAA 1 HETATM 9 C CAF DE1 . . . B 2 -8.481 0.927 1.113 1 69.26 ? CAF DE1 201 AAA 1 HETATM 10 C CAD DE1 . . . B 2 -7.005 0.912 0.841 1 77.98 ? CAD DE1 201 AAA 1 HETATM 11 O OAB DE1 . . . B 2 -6.34 0.047 1.735 1 67.22 ? OAB DE1 201 AAA 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 11 #