data_6T4Y # _model_server_result.job_id -ke-Z2hQ3xOpTsdNFa2j2g _model_server_result.datetime_utc '2024-11-15 02:56:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6t4y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 6T4Y # _exptl.entry_id 6T4Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 402.653 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 25-HYDROXYCHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6T4Y _cell.length_a 108.509 _cell.length_b 108.509 _cell.length_c 105.04 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6T4Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H46 O2' _chem_comp.formula_weight 402.653 _chem_comp.id HC3 _chem_comp.mon_nstd_flag . _chem_comp.name 25-HYDROXYCHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (3BETA)-CHOLEST-5-ENE-3,25-DIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C13 HC3 sing 188 n n C18 H181 HC3 sing 189 n n C18 H182 HC3 sing 190 n n C18 H183 HC3 sing 191 n n C13 C12 HC3 sing 192 n n C13 C14 HC3 sing 193 n n C13 C17 HC3 sing 194 n n C12 C11 HC3 sing 195 n n C12 H121 HC3 sing 196 n n C12 H122 HC3 sing 197 n n C11 C9 HC3 sing 198 n n C11 H111 HC3 sing 199 n n C11 H112 HC3 sing 200 n n C9 C10 HC3 sing 201 n n C9 C8 HC3 sing 202 n n C9 H9 HC3 sing 203 n n C10 C19 HC3 sing 204 n n C10 C1 HC3 sing 205 n n C10 C5 HC3 sing 206 n n C19 H191 HC3 sing 207 n n C19 H192 HC3 sing 208 n n C19 H193 HC3 sing 209 n n C1 C2 HC3 sing 210 n n C1 H11 HC3 sing 211 n n C1 H12 HC3 sing 212 n n C2 C3 HC3 sing 213 n n C2 H21 HC3 sing 214 n n C2 H22 HC3 sing 215 n n C3 O1 HC3 sing 216 n n C3 C4 HC3 sing 217 n n C3 H3 HC3 sing 218 n n O1 HO1 HC3 sing 219 n n C4 C5 HC3 sing 220 n n C4 H41 HC3 sing 221 n n C4 H42 HC3 sing 222 n n C5 C6 HC3 doub 223 n n C6 C7 HC3 sing 224 n n C6 H6 HC3 sing 225 n n C7 C8 HC3 sing 226 n n C7 H71 HC3 sing 227 n n C7 H72 HC3 sing 228 n n C8 C14 HC3 sing 229 n n C8 H8 HC3 sing 230 n n C14 C15 HC3 sing 231 n n C14 H14 HC3 sing 232 n n C15 C16 HC3 sing 233 n n C15 H151 HC3 sing 234 n n C15 H152 HC3 sing 235 n n C16 C17 HC3 sing 236 n n C16 H161 HC3 sing 237 n n C16 H162 HC3 sing 238 n n C17 C20 HC3 sing 239 n n C17 H17 HC3 sing 240 n n C20 C21 HC3 sing 241 n n C20 C22 HC3 sing 242 n n C20 H20 HC3 sing 243 n n C21 H211 HC3 sing 244 n n C21 H212 HC3 sing 245 n n C21 H213 HC3 sing 246 n n C22 C23 HC3 sing 247 n n C22 H221 HC3 sing 248 n n C22 H222 HC3 sing 249 n n C23 C24 HC3 sing 250 n n C23 H231 HC3 sing 251 n n C23 H232 HC3 sing 252 n n C24 C25 HC3 sing 253 n n C24 H241 HC3 sing 254 n n C24 H242 HC3 sing 255 n n C25 C26 HC3 sing 256 n n C25 C27 HC3 sing 257 n n C25 O2 HC3 sing 258 n n C26 H261 HC3 sing 259 n n C26 H262 HC3 sing 260 n n C26 H263 HC3 sing 261 n n C27 H271 HC3 sing 262 n n C27 H272 HC3 sing 263 n n C27 H273 HC3 sing 264 n n O2 HO2 HC3 sing 265 n n # _atom_sites.entry_id 6T4Y _atom_sites.fract_transf_matrix[1][1] 0.009216 _atom_sites.fract_transf_matrix[1][2] 0.005321 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010642 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00952 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HC3 A 1 601 601 HC3 25H . C 3 4F1 A 1 602 701 4F1 MRL . D 4 GOL A 1 603 801 GOL GOL . E 5 HOH A 1 701 38 HOH HOH . E 5 HOH A 2 702 40 HOH HOH . E 5 HOH A 3 703 12 HOH HOH . E 5 HOH A 4 704 15 HOH HOH . E 5 HOH A 5 705 8 HOH HOH . E 5 HOH A 6 706 30 HOH HOH . E 5 HOH A 7 707 6 HOH HOH . E 5 HOH A 8 708 44 HOH HOH . E 5 HOH A 9 709 22 HOH HOH . E 5 HOH A 10 710 24 HOH HOH . E 5 HOH A 11 711 28 HOH HOH . E 5 HOH A 12 712 37 HOH HOH . E 5 HOH A 13 713 11 HOH HOH . E 5 HOH A 14 714 4 HOH HOH . E 5 HOH A 15 715 25 HOH HOH . E 5 HOH A 16 716 27 HOH HOH . E 5 HOH A 17 717 2 HOH HOH . E 5 HOH A 18 718 5 HOH HOH . E 5 HOH A 19 719 21 HOH HOH . E 5 HOH A 20 720 36 HOH HOH . E 5 HOH A 21 721 17 HOH HOH . E 5 HOH A 22 722 14 HOH HOH . E 5 HOH A 23 723 23 HOH HOH . E 5 HOH A 24 724 18 HOH HOH . E 5 HOH A 25 725 29 HOH HOH . E 5 HOH A 26 726 7 HOH HOH . E 5 HOH A 27 727 34 HOH HOH . E 5 HOH A 28 728 13 HOH HOH . E 5 HOH A 29 729 20 HOH HOH . E 5 HOH A 30 730 9 HOH HOH . E 5 HOH A 31 731 3 HOH HOH . E 5 HOH A 32 732 45 HOH HOH . E 5 HOH A 33 733 35 HOH HOH . E 5 HOH A 34 734 43 HOH HOH . E 5 HOH A 35 735 10 HOH HOH . E 5 HOH A 36 736 19 HOH HOH . E 5 HOH A 37 737 16 HOH HOH . E 5 HOH A 38 738 26 HOH HOH . E 5 HOH A 39 739 39 HOH HOH . E 5 HOH A 40 740 32 HOH HOH . E 5 HOH A 41 741 46 HOH HOH . E 5 HOH A 42 742 1 HOH HOH . E 5 HOH A 43 743 47 HOH HOH . E 5 HOH A 44 744 31 HOH HOH . E 5 HOH A 45 745 33 HOH HOH . E 5 HOH A 46 746 42 HOH HOH . E 5 HOH A 47 747 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 HC3 . . . B 2 -2.958 -33.482 -5.16 1 42.89 ? C18 HC3 601 A 1 HETATM 2 C C13 HC3 . . . B 2 -2.611 -34.841 -5.775 1 42.35 ? C13 HC3 601 A 1 HETATM 3 C C12 HC3 . . . B 2 -1.738 -35.653 -4.82 1 44.13 ? C12 HC3 601 A 1 HETATM 4 C C11 HC3 . . . B 2 -0.395 -34.961 -4.576 1 40.92 ? C11 HC3 601 A 1 HETATM 5 C C9 HC3 . . . B 2 0.383 -34.668 -5.867 1 47.41 ? C9 HC3 601 A 1 HETATM 6 C C10 HC3 . . . B 2 1.723 -33.931 -5.606 1 39.75 ? C10 HC3 601 A 1 HETATM 7 C C19 HC3 . . . B 2 1.536 -32.683 -4.73 1 42.83 ? C19 HC3 601 A 1 HETATM 8 C C1 HC3 . . . B 2 2.692 -34.905 -4.905 1 43.67 ? C1 HC3 601 A 1 HETATM 9 C C2 HC3 . . . B 2 4.128 -34.399 -4.818 1 43.34 ? C2 HC3 601 A 1 HETATM 10 C C3 HC3 . . . B 2 4.674 -34.074 -6.18 1 48.77 ? C3 HC3 601 A 1 HETATM 11 O O1 HC3 . . . B 2 5.989 -33.537 -6.038 1 52.42 ? O1 HC3 601 A 1 HETATM 12 C C4 HC3 . . . B 2 3.786 -33.055 -6.866 1 44.05 ? C4 HC3 601 A 1 HETATM 13 C C5 HC3 . . . B 2 2.342 -33.49 -6.925 1 46.49 ? C5 HC3 601 A 1 HETATM 14 C C6 HC3 . . . B 2 1.687 -33.488 -8.069 1 47.19 ? C6 HC3 601 A 1 HETATM 15 C C7 HC3 . . . B 2 0.266 -33.904 -8.243 1 48.01 ? C7 HC3 601 A 1 HETATM 16 C C8 HC3 . . . B 2 -0.486 -33.961 -6.922 1 47.98 ? C8 HC3 601 A 1 HETATM 17 C C14 HC3 . . . B 2 -1.808 -34.695 -7.077 1 47.45 ? C14 HC3 601 A 1 HETATM 18 C C15 HC3 . . . B 2 -2.824 -34.185 -8.09 1 46.04 ? C15 HC3 601 A 1 HETATM 19 C C16 HC3 . . . B 2 -4.155 -34.812 -7.646 1 42.46 ? C16 HC3 601 A 1 HETATM 20 C C17 HC3 . . . B 2 -3.89 -35.544 -6.31 1 43.22 ? C17 HC3 601 A 1 HETATM 21 C C20 HC3 . . . B 2 -5.138 -35.622 -5.418 1 49.51 ? C20 HC3 601 A 1 HETATM 22 C C21 HC3 . . . B 2 -4.883 -36.31 -4.085 1 44.89 ? C21 HC3 601 A 1 HETATM 23 C C22 HC3 . . . B 2 -6.312 -36.276 -6.153 1 48.05 ? C22 HC3 601 A 1 HETATM 24 C C23 HC3 . . . B 2 -6.044 -37.593 -6.79 1 49.75 ? C23 HC3 601 A 1 HETATM 25 C C24 HC3 . . . B 2 -7.206 -38.034 -7.672 1 55.59 ? C24 HC3 601 A 1 HETATM 26 C C25 HC3 . . . B 2 -7.18 -39.462 -8.2 1 58.31 ? C25 HC3 601 A 1 HETATM 27 C C26 HC3 . . . B 2 -8.158 -39.672 -9.337 1 54.75 ? C26 HC3 601 A 1 HETATM 28 C C27 HC3 . . . B 2 -7.41 -40.48 -7.103 1 54.11 ? C27 HC3 601 A 1 HETATM 29 O O2 HC3 . . . B 2 -5.895 -39.695 -8.755 1 59.03 ? O2 HC3 601 A 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 1185 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 29 #