data_6T50 # _model_server_result.job_id 1Fw-q-jVlZGVeEmpsCvs3g _model_server_result.datetime_utc '2024-11-17 23:39:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6t50 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 6T50 # _exptl.entry_id 6T50 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 402.653 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 25-HYDROXYCHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6T50 _cell.length_a 108.325 _cell.length_b 108.325 _cell.length_c 108.509 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6T50 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H46 O2' _chem_comp.formula_weight 402.653 _chem_comp.id HC3 _chem_comp.mon_nstd_flag . _chem_comp.name 25-HYDROXYCHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (3BETA)-CHOLEST-5-ENE-3,25-DIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C13 HC3 sing 142 n n C18 H181 HC3 sing 143 n n C18 H182 HC3 sing 144 n n C18 H183 HC3 sing 145 n n C13 C12 HC3 sing 146 n n C13 C14 HC3 sing 147 n n C13 C17 HC3 sing 148 n n C12 C11 HC3 sing 149 n n C12 H121 HC3 sing 150 n n C12 H122 HC3 sing 151 n n C11 C9 HC3 sing 152 n n C11 H111 HC3 sing 153 n n C11 H112 HC3 sing 154 n n C9 C10 HC3 sing 155 n n C9 C8 HC3 sing 156 n n C9 H9 HC3 sing 157 n n C10 C19 HC3 sing 158 n n C10 C1 HC3 sing 159 n n C10 C5 HC3 sing 160 n n C19 H191 HC3 sing 161 n n C19 H192 HC3 sing 162 n n C19 H193 HC3 sing 163 n n C1 C2 HC3 sing 164 n n C1 H11 HC3 sing 165 n n C1 H12 HC3 sing 166 n n C2 C3 HC3 sing 167 n n C2 H21 HC3 sing 168 n n C2 H22 HC3 sing 169 n n C3 O1 HC3 sing 170 n n C3 C4 HC3 sing 171 n n C3 H3 HC3 sing 172 n n O1 HO1 HC3 sing 173 n n C4 C5 HC3 sing 174 n n C4 H41 HC3 sing 175 n n C4 H42 HC3 sing 176 n n C5 C6 HC3 doub 177 n n C6 C7 HC3 sing 178 n n C6 H6 HC3 sing 179 n n C7 C8 HC3 sing 180 n n C7 H71 HC3 sing 181 n n C7 H72 HC3 sing 182 n n C8 C14 HC3 sing 183 n n C8 H8 HC3 sing 184 n n C14 C15 HC3 sing 185 n n C14 H14 HC3 sing 186 n n C15 C16 HC3 sing 187 n n C15 H151 HC3 sing 188 n n C15 H152 HC3 sing 189 n n C16 C17 HC3 sing 190 n n C16 H161 HC3 sing 191 n n C16 H162 HC3 sing 192 n n C17 C20 HC3 sing 193 n n C17 H17 HC3 sing 194 n n C20 C21 HC3 sing 195 n n C20 C22 HC3 sing 196 n n C20 H20 HC3 sing 197 n n C21 H211 HC3 sing 198 n n C21 H212 HC3 sing 199 n n C21 H213 HC3 sing 200 n n C22 C23 HC3 sing 201 n n C22 H221 HC3 sing 202 n n C22 H222 HC3 sing 203 n n C23 C24 HC3 sing 204 n n C23 H231 HC3 sing 205 n n C23 H232 HC3 sing 206 n n C24 C25 HC3 sing 207 n n C24 H241 HC3 sing 208 n n C24 H242 HC3 sing 209 n n C25 C26 HC3 sing 210 n n C25 C27 HC3 sing 211 n n C25 O2 HC3 sing 212 n n C26 H261 HC3 sing 213 n n C26 H262 HC3 sing 214 n n C26 H263 HC3 sing 215 n n C27 H271 HC3 sing 216 n n C27 H272 HC3 sing 217 n n C27 H273 HC3 sing 218 n n O2 HO2 HC3 sing 219 n n # _atom_sites.entry_id 6T50 _atom_sites.fract_transf_matrix[1][1] 0.009231 _atom_sites.fract_transf_matrix[1][2] 0.00533 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01066 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009216 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HC3 A 1 601 601 HC3 25H . C 3 MJE A 1 602 701 MJE GLK . D 4 GOL A 1 603 801 GOL GOL . E 5 HOH A 1 701 59 HOH HOH . E 5 HOH A 2 702 58 HOH HOH . E 5 HOH A 3 703 69 HOH HOH . E 5 HOH A 4 704 51 HOH HOH . E 5 HOH A 5 705 80 HOH HOH . E 5 HOH A 6 706 66 HOH HOH . E 5 HOH A 7 707 22 HOH HOH . E 5 HOH A 8 708 49 HOH HOH . E 5 HOH A 9 709 32 HOH HOH . E 5 HOH A 10 710 39 HOH HOH . E 5 HOH A 11 711 54 HOH HOH . E 5 HOH A 12 712 12 HOH HOH . E 5 HOH A 13 713 57 HOH HOH . E 5 HOH A 14 714 6 HOH HOH . E 5 HOH A 15 715 41 HOH HOH . E 5 HOH A 16 716 38 HOH HOH . E 5 HOH A 17 717 7 HOH HOH . E 5 HOH A 18 718 4 HOH HOH . E 5 HOH A 19 719 27 HOH HOH . E 5 HOH A 20 720 21 HOH HOH . E 5 HOH A 21 721 43 HOH HOH . E 5 HOH A 22 722 3 HOH HOH . E 5 HOH A 23 723 2 HOH HOH . E 5 HOH A 24 724 8 HOH HOH . E 5 HOH A 25 725 36 HOH HOH . E 5 HOH A 26 726 63 HOH HOH . E 5 HOH A 27 727 47 HOH HOH . E 5 HOH A 28 728 5 HOH HOH . E 5 HOH A 29 729 9 HOH HOH . E 5 HOH A 30 730 23 HOH HOH . E 5 HOH A 31 731 35 HOH HOH . E 5 HOH A 32 732 16 HOH HOH . E 5 HOH A 33 733 84 HOH HOH . E 5 HOH A 34 734 31 HOH HOH . E 5 HOH A 35 735 72 HOH HOH . E 5 HOH A 36 736 78 HOH HOH . E 5 HOH A 37 737 28 HOH HOH . E 5 HOH A 38 738 90 HOH HOH . E 5 HOH A 39 739 1 HOH HOH . E 5 HOH A 40 740 81 HOH HOH . E 5 HOH A 41 741 17 HOH HOH . E 5 HOH A 42 742 13 HOH HOH . E 5 HOH A 43 743 26 HOH HOH . E 5 HOH A 44 744 60 HOH HOH . E 5 HOH A 45 745 24 HOH HOH . E 5 HOH A 46 746 40 HOH HOH . E 5 HOH A 47 747 62 HOH HOH . E 5 HOH A 48 748 37 HOH HOH . E 5 HOH A 49 749 64 HOH HOH . E 5 HOH A 50 750 76 HOH HOH . E 5 HOH A 51 751 79 HOH HOH . E 5 HOH A 52 752 19 HOH HOH . E 5 HOH A 53 753 68 HOH HOH . E 5 HOH A 54 754 11 HOH HOH . E 5 HOH A 55 755 18 HOH HOH . E 5 HOH A 56 756 34 HOH HOH . E 5 HOH A 57 757 15 HOH HOH . E 5 HOH A 58 758 29 HOH HOH . E 5 HOH A 59 759 20 HOH HOH . E 5 HOH A 60 760 86 HOH HOH . E 5 HOH A 61 761 92 HOH HOH . E 5 HOH A 62 762 10 HOH HOH . E 5 HOH A 63 763 14 HOH HOH . E 5 HOH A 64 764 61 HOH HOH . E 5 HOH A 65 765 42 HOH HOH . E 5 HOH A 66 766 33 HOH HOH . E 5 HOH A 67 767 56 HOH HOH . E 5 HOH A 68 768 82 HOH HOH . E 5 HOH A 69 769 25 HOH HOH . E 5 HOH A 70 770 73 HOH HOH . E 5 HOH A 71 771 85 HOH HOH . E 5 HOH A 72 772 50 HOH HOH . E 5 HOH A 73 773 45 HOH HOH . E 5 HOH A 74 774 48 HOH HOH . E 5 HOH A 75 775 71 HOH HOH . E 5 HOH A 76 776 70 HOH HOH . E 5 HOH A 77 777 83 HOH HOH . E 5 HOH A 78 778 67 HOH HOH . E 5 HOH A 79 779 65 HOH HOH . E 5 HOH A 80 780 30 HOH HOH . E 5 HOH A 81 781 44 HOH HOH . E 5 HOH A 82 782 75 HOH HOH . E 5 HOH A 83 783 74 HOH HOH . E 5 HOH A 84 784 91 HOH HOH . E 5 HOH A 85 785 88 HOH HOH . E 5 HOH A 86 786 55 HOH HOH . E 5 HOH A 87 787 77 HOH HOH . E 5 HOH A 88 788 52 HOH HOH . E 5 HOH A 89 789 87 HOH HOH . E 5 HOH A 90 790 53 HOH HOH . E 5 HOH A 91 791 46 HOH HOH . E 5 HOH A 92 792 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 HC3 . . . B 2 -3.309 -33.485 -5.935 1 33.31 ? C18 HC3 601 A 1 HETATM 2 C C13 HC3 . . . B 2 -2.915 -34.822 -6.579 1 34.01 ? C13 HC3 601 A 1 HETATM 3 C C12 HC3 . . . B 2 -2.079 -35.659 -5.603 1 33.95 ? C12 HC3 601 A 1 HETATM 4 C C11 HC3 . . . B 2 -0.712 -35.012 -5.319 1 34.27 ? C11 HC3 601 A 1 HETATM 5 C C9 HC3 . . . B 2 0.109 -34.713 -6.586 1 33.08 ? C9 HC3 601 A 1 HETATM 6 C C10 HC3 . . . B 2 1.461 -33.989 -6.282 1 30.8 ? C10 HC3 601 A 1 HETATM 7 C C19 HC3 . . . B 2 1.255 -32.743 -5.409 1 32.05 ? C19 HC3 601 A 1 HETATM 8 C C1 HC3 . . . B 2 2.422 -34.979 -5.573 1 34.9 ? C1 HC3 601 A 1 HETATM 9 C C2 HC3 . . . B 2 3.858 -34.473 -5.408 1 39.52 ? C2 HC3 601 A 1 HETATM 10 C C3 HC3 . . . B 2 4.456 -34.097 -6.743 1 38.12 ? C3 HC3 601 A 1 HETATM 11 O O1 HC3 . . . B 2 5.753 -33.509 -6.553 1 38.05 ? O1 HC3 601 A 1 HETATM 12 C C4 HC3 . . . B 2 3.565 -33.092 -7.454 1 32.28 ? C4 HC3 601 A 1 HETATM 13 C C5 HC3 . . . B 2 2.122 -33.551 -7.577 1 33.67 ? C5 HC3 601 A 1 HETATM 14 C C6 HC3 . . . B 2 1.512 -33.59 -8.752 1 39.2 ? C6 HC3 601 A 1 HETATM 15 C C7 HC3 . . . B 2 0.059 -33.907 -8.958 1 35.81 ? C7 HC3 601 A 1 HETATM 16 C C8 HC3 . . . B 2 -0.721 -33.962 -7.648 1 35.59 ? C8 HC3 601 A 1 HETATM 17 C C14 HC3 . . . B 2 -2.056 -34.668 -7.848 1 33.94 ? C14 HC3 601 A 1 HETATM 18 C C15 HC3 . . . B 2 -3.024 -34.136 -8.901 1 35.62 ? C15 HC3 601 A 1 HETATM 19 C C16 HC3 . . . B 2 -4.366 -34.816 -8.551 1 38.07 ? C16 HC3 601 A 1 HETATM 20 C C17 HC3 . . . B 2 -4.182 -35.514 -7.174 1 38.93 ? C17 HC3 601 A 1 HETATM 21 C C20 HC3 . . . B 2 -5.48 -35.539 -6.348 1 40.94 ? C20 HC3 601 A 1 HETATM 22 C C21 HC3 . . . B 2 -5.321 -36.263 -5.013 1 37.01 ? C21 HC3 601 A 1 HETATM 23 C C22 HC3 . . . B 2 -6.638 -36.156 -7.157 1 37.82 ? C22 HC3 601 A 1 HETATM 24 C C23 HC3 . . . B 2 -6.447 -37.572 -7.601 1 37.92 ? C23 HC3 601 A 1 HETATM 25 C C24 HC3 . . . B 2 -7.572 -38.023 -8.528 1 40.46 ? C24 HC3 601 A 1 HETATM 26 C C25 HC3 . . . B 2 -7.56 -39.474 -8.984 1 42.16 ? C25 HC3 601 A 1 HETATM 27 C C26 HC3 . . . B 2 -8.483 -39.66 -10.179 1 49.29 ? C26 HC3 601 A 1 HETATM 28 C C27 HC3 . . . B 2 -7.929 -40.421 -7.854 1 39.25 ? C27 HC3 601 A 1 HETATM 29 O O2 HC3 . . . B 2 -6.244 -39.843 -9.433 1 42.96 ? O2 HC3 601 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 29 #