data_6T5I
#
_model_server_result.job_id            jUYu_bCfM8BVk8vR-ad8yA 
_model_server_result.datetime_utc      '2025-01-07 19:36:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6t5i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    6T5I 
#
_exptl.entry_id    6T5I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              466.599 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ~{N}-(6-methyl-1,3-benzothiazol-2-yl)-2-[(4-oxidanylidene-3-phenyl-6,7-dihydrothieno[3,2-d]pyrimidin-2-yl)sulfanyl]ethanamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6T5I 
_cell.length_a            47.951 
_cell.length_b            92.667 
_cell.length_c            101.447 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6T5I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ASN 32 A ASN 30 1_555 J NA NA . A NA 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
metalc ? metalc2 J NA NA . A NA 308 1_555 Q O HOH . A HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? 
metalc ? metalc3 J NA NA . A NA 308 1_555 Q O HOH . A HOH 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc4 B O ASN 32 B ASN 30 1_555 P NA NA . B NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? 
metalc ? metalc5 B OE1 GLU 38 B GLU 36 1_555 P NA NA . B NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3 ? 
metalc ? metalc6 P NA NA . B NA 406 1_555 R O HOH . B HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? 
metalc ? metalc7 P NA NA . B NA 406 1_555 R O HOH . B HOH 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.621 ? 
#
_chem_comp.formula           'C22 H18 N4 O2 S3' 
_chem_comp.formula_weight    466.599 
_chem_comp.id                9XK 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ~{N}-(6-methyl-1,3-benzothiazol-2-yl)-2-[(4-oxidanylidene-3-phenyl-6,7-dihydrothieno[3,2-d]pyrimidin-2-yl)sulfanyl]ethanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C01 C02 9XK sing 1 n n 
C02 C03 9XK doub 2 n y 
C02 C07 9XK sing 3 n y 
C03 C04 9XK sing 4 n y 
C04 C05 9XK doub 5 n y 
C04 S31 9XK sing 6 n y 
C05 C06 9XK sing 7 n y 
C05 N08 9XK sing 8 n y 
C06 C07 9XK doub 9 n y 
N08 C09 9XK doub 10 n y 
C09 N10 9XK sing 11 n n 
C09 S31 9XK sing 12 n y 
N10 C11 9XK sing 13 n n 
C11 O12 9XK doub 14 n n 
C11 C13 9XK sing 15 n n 
C13 S14 9XK sing 16 n n 
S14 C15 9XK sing 17 n n 
C15 N16 9XK doub 18 n n 
C15 N24 9XK sing 19 n n 
N16 C17 9XK sing 20 n n 
C17 C18 9XK doub 21 n n 
C17 C21 9XK sing 22 n n 
C18 S19 9XK sing 23 n n 
C18 C22 9XK sing 24 n n 
S19 C20 9XK sing 25 n n 
C20 C21 9XK sing 26 n n 
C22 O23 9XK doub 27 n n 
C22 N24 9XK sing 28 n n 
N24 C25 9XK sing 29 n n 
C25 C26 9XK doub 30 n y 
C25 C30 9XK sing 31 n y 
C26 C27 9XK sing 32 n y 
C27 C28 9XK doub 33 n y 
C28 C29 9XK sing 34 n y 
C29 C30 9XK doub 35 n y 
C01 H013 9XK sing 36 n n 
C01 H011 9XK sing 37 n n 
C01 H012 9XK sing 38 n n 
C03 H031 9XK sing 39 n n 
C06 H061 9XK sing 40 n n 
C07 H071 9XK sing 41 n n 
N10 H101 9XK sing 42 n n 
C13 H131 9XK sing 43 n n 
C13 H132 9XK sing 44 n n 
C20 H201 9XK sing 45 n n 
C20 H202 9XK sing 46 n n 
C21 H211 9XK sing 47 n n 
C21 H212 9XK sing 48 n n 
C26 H261 9XK sing 49 n n 
C27 H271 9XK sing 50 n n 
C28 H281 9XK sing 51 n n 
C29 H291 9XK sing 52 n n 
C30 H301 9XK sing 53 n n 
#
_atom_sites.entry_id                     6T5I 
_atom_sites.fract_transf_matrix[1][1]    0.020855 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010791 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009857 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 9XK A 1 301 301 9XK 9XK . 
D 3 DMS A 1 302 401 DMS DMS . 
E 3 DMS A 1 303 501 DMS DMS . 
F 3 DMS A 1 304 601 DMS DMS . 
G 3 DMS A 1 305 701 DMS DMS . 
H 3 DMS A 1 306 801 DMS DMS . 
I 3 DMS A 1 307 901 DMS DMS . 
J 4 NA A 1 308 1 NA NA . 
K 3 DMS B 1 401 401 DMS DMS . 
L 3 DMS B 1 402 501 DMS DMS . 
M 3 DMS B 1 403 601 DMS DMS . 
N 3 DMS B 1 404 701 DMS DMS . 
O 3 DMS B 1 405 801 DMS DMS . 
P 4 NA B 1 406 2 NA NA . 
Q 5 HOH A 1 401 27 HOH HOH . 
Q 5 HOH A 2 402 81 HOH HOH . 
Q 5 HOH A 3 403 101 HOH HOH . 
Q 5 HOH A 4 404 58 HOH HOH . 
Q 5 HOH A 5 405 76 HOH HOH . 
Q 5 HOH A 6 406 64 HOH HOH . 
Q 5 HOH A 7 407 97 HOH HOH . 
Q 5 HOH A 8 408 75 HOH HOH . 
Q 5 HOH A 9 409 33 HOH HOH . 
Q 5 HOH A 10 410 19 HOH HOH . 
Q 5 HOH A 11 411 100 HOH HOH . 
Q 5 HOH A 12 412 83 HOH HOH . 
Q 5 HOH A 13 413 45 HOH HOH . 
Q 5 HOH A 14 414 4 HOH HOH . 
Q 5 HOH A 15 415 20 HOH HOH . 
Q 5 HOH A 16 416 80 HOH HOH . 
Q 5 HOH A 17 417 56 HOH HOH . 
Q 5 HOH A 18 418 16 HOH HOH . 
Q 5 HOH A 19 419 3 HOH HOH . 
Q 5 HOH A 20 420 87 HOH HOH . 
Q 5 HOH A 21 421 70 HOH HOH . 
Q 5 HOH A 22 422 69 HOH HOH . 
Q 5 HOH A 23 423 21 HOH HOH . 
Q 5 HOH A 24 424 90 HOH HOH . 
Q 5 HOH A 25 425 14 HOH HOH . 
Q 5 HOH A 26 426 12 HOH HOH . 
Q 5 HOH A 27 427 98 HOH HOH . 
Q 5 HOH A 28 428 2 HOH HOH . 
Q 5 HOH A 29 429 48 HOH HOH . 
Q 5 HOH A 30 430 17 HOH HOH . 
Q 5 HOH A 31 431 65 HOH HOH . 
Q 5 HOH A 32 432 46 HOH HOH . 
Q 5 HOH A 33 433 96 HOH HOH . 
Q 5 HOH A 34 434 57 HOH HOH . 
Q 5 HOH A 35 435 63 HOH HOH . 
Q 5 HOH A 36 436 85 HOH HOH . 
Q 5 HOH A 37 437 40 HOH HOH . 
Q 5 HOH A 38 438 84 HOH HOH . 
Q 5 HOH A 39 439 72 HOH HOH . 
Q 5 HOH A 40 440 36 HOH HOH . 
Q 5 HOH A 41 441 38 HOH HOH . 
Q 5 HOH A 42 442 35 HOH HOH . 
Q 5 HOH A 43 443 89 HOH HOH . 
Q 5 HOH A 44 444 55 HOH HOH . 
Q 5 HOH A 45 445 78 HOH HOH . 
Q 5 HOH A 46 446 59 HOH HOH . 
Q 5 HOH A 47 447 88 HOH HOH . 
Q 5 HOH A 48 448 68 HOH HOH . 
Q 5 HOH A 49 449 50 HOH HOH . 
Q 5 HOH A 50 450 24 HOH HOH . 
Q 5 HOH A 51 451 99 HOH HOH . 
Q 5 HOH A 52 452 77 HOH HOH . 
Q 5 HOH A 53 453 95 HOH HOH . 
Q 5 HOH A 54 454 54 HOH HOH . 
Q 5 HOH A 55 455 62 HOH HOH . 
Q 5 HOH A 56 456 28 HOH HOH . 
Q 5 HOH A 57 457 74 HOH HOH . 
Q 5 HOH A 58 458 49 HOH HOH . 
R 5 HOH B 1 501 37 HOH HOH . 
R 5 HOH B 2 502 32 HOH HOH . 
R 5 HOH B 3 503 52 HOH HOH . 
R 5 HOH B 4 504 47 HOH HOH . 
R 5 HOH B 5 505 39 HOH HOH . 
R 5 HOH B 6 506 92 HOH HOH . 
R 5 HOH B 7 507 82 HOH HOH . 
R 5 HOH B 8 508 7 HOH HOH . 
R 5 HOH B 9 509 23 HOH HOH . 
R 5 HOH B 10 510 94 HOH HOH . 
R 5 HOH B 11 511 1 HOH HOH . 
R 5 HOH B 12 512 73 HOH HOH . 
R 5 HOH B 13 513 8 HOH HOH . 
R 5 HOH B 14 514 43 HOH HOH . 
R 5 HOH B 15 515 61 HOH HOH . 
R 5 HOH B 16 516 26 HOH HOH . 
R 5 HOH B 17 517 91 HOH HOH . 
R 5 HOH B 18 518 53 HOH HOH . 
R 5 HOH B 19 519 41 HOH HOH . 
R 5 HOH B 20 520 66 HOH HOH . 
R 5 HOH B 21 521 30 HOH HOH . 
R 5 HOH B 22 522 9 HOH HOH . 
R 5 HOH B 23 523 51 HOH HOH . 
R 5 HOH B 24 524 6 HOH HOH . 
R 5 HOH B 25 525 11 HOH HOH . 
R 5 HOH B 26 526 34 HOH HOH . 
R 5 HOH B 27 527 15 HOH HOH . 
R 5 HOH B 28 528 42 HOH HOH . 
R 5 HOH B 29 529 79 HOH HOH . 
R 5 HOH B 30 530 10 HOH HOH . 
R 5 HOH B 31 531 5 HOH HOH . 
R 5 HOH B 32 532 71 HOH HOH . 
R 5 HOH B 33 533 22 HOH HOH . 
R 5 HOH B 34 534 31 HOH HOH . 
R 5 HOH B 35 535 60 HOH HOH . 
R 5 HOH B 36 536 86 HOH HOH . 
R 5 HOH B 37 537 93 HOH HOH . 
R 5 HOH B 38 538 67 HOH HOH . 
R 5 HOH B 39 539 18 HOH HOH . 
R 5 HOH B 40 540 25 HOH HOH . 
R 5 HOH B 41 541 13 HOH HOH . 
R 5 HOH B 42 542 29 HOH HOH . 
R 5 HOH B 43 543 44 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 9XK . . . C 2 27.71 -6.255 -12.747 1 74.2 ? C01 9XK 301 A 1 
HETATM 2 C C02 9XK . . . C 2 26.297 -6.792 -12.965 1 68.56 ? C02 9XK 301 A 1 
HETATM 3 C C03 9XK . . . C 2 25.747 -7.66 -12.015 1 62.55 ? C03 9XK 301 A 1 
HETATM 4 C C04 9XK . . . C 2 24.467 -8.16 -12.192 1 66.05 ? C04 9XK 301 A 1 
HETATM 5 C C05 9XK . . . C 2 23.685 -7.814 -13.322 1 64.05 ? C05 9XK 301 A 1 
HETATM 6 C C06 9XK . . . C 2 24.236 -6.941 -14.279 1 64.77 ? C06 9XK 301 A 1 
HETATM 7 C C07 9XK . . . C 2 25.529 -6.438 -14.097 1 63.46 ? C07 9XK 301 A 1 
HETATM 8 N N08 9XK . . . C 2 22.457 -8.456 -13.237 1 65.34 ? N08 9XK 301 A 1 
HETATM 9 C C09 9XK . . . C 2 22.367 -9.25 -12.058 1 67.55 ? C09 9XK 301 A 1 
HETATM 10 N N10 9XK . . . C 2 21.31 -10.009 -11.661 1 66.3 ? N10 9XK 301 A 1 
HETATM 11 C C11 9XK . . . C 2 20.396 -10.589 -12.467 1 75.79 ? C11 9XK 301 A 1 
HETATM 12 O O12 9XK . . . C 2 20.4 -10.502 -13.694 1 74.12 ? O12 9XK 301 A 1 
HETATM 13 C C13 9XK . . . C 2 19.314 -11.39 -11.748 1 71.32 ? C13 9XK 301 A 1 
HETATM 14 S S14 9XK . . . C 2 19.867 -13.067 -11.326 1 74.37 ? S14 9XK 301 A 1 
HETATM 15 C C15 9XK . . . C 2 18.914 -14.237 -12.212 1 79.06 ? C15 9XK 301 A 1 
HETATM 16 N N16 9XK . . . C 2 19.086 -14.323 -13.536 1 77.35 ? N16 9XK 301 A 1 
HETATM 17 C C17 9XK . . . C 2 18.348 -15.225 -14.196 1 60.79 ? C17 9XK 301 A 1 
HETATM 18 C C18 9XK . . . C 2 17.325 -16.158 -13.54 1 58.73 ? C18 9XK 301 A 1 
HETATM 19 S S19 9XK . . . C 2 16.554 -17.199 -14.723 1 57.34 ? S19 9XK 301 A 1 
HETATM 20 C C20 9XK . . . C 2 17.41 -16.667 -16.164 1 49.35 ? C20 9XK 301 A 1 
HETATM 21 C C21 9XK . . . C 2 18.449 -15.419 -15.688 1 57.91 ? C21 9XK 301 A 1 
HETATM 22 C C22 9XK . . . C 2 17.153 -16.041 -12.066 1 70.8 ? C22 9XK 301 A 1 
HETATM 23 O O23 9XK . . . C 2 16.351 -16.751 -11.441 1 64.86 ? O23 9XK 301 A 1 
HETATM 24 N N24 9XK . . . C 2 17.933 -15.103 -11.439 1 73.57 ? N24 9XK 301 A 1 
HETATM 25 C C25 9XK . . . C 2 17.817 -14.936 -10.001 1 70.12 ? C25 9XK 301 A 1 
HETATM 26 C C26 9XK . . . C 2 16.869 -14.072 -9.478 1 69.91 ? C26 9XK 301 A 1 
HETATM 27 C C27 9XK . . . C 2 16.773 -13.928 -8.103 1 71.93 ? C27 9XK 301 A 1 
HETATM 28 C C28 9XK . . . C 2 17.617 -14.639 -7.265 1 77.75 ? C28 9XK 301 A 1 
HETATM 29 C C29 9XK . . . C 2 18.562 -15.501 -7.796 1 69.39 ? C29 9XK 301 A 1 
HETATM 30 C C30 9XK . . . C 2 18.664 -15.651 -9.17 1 70.01 ? C30 9XK 301 A 1 
HETATM 31 S S31 9XK . . . C 2 23.689 -9.108 -11.289 1 71.07 ? S31 9XK 301 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           31 
#