data_6T5R # _model_server_result.job_id uPBfm2s_ihU3wGxczWUNiA _model_server_result.datetime_utc '2024-11-08 09:11:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6t5r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":202}' # _entry.id 6T5R # _exptl.entry_id 6T5R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.8 _cell.angle_gamma 90 _cell.entry_id 6T5R _cell.length_a 62.74 _cell.length_b 89.32 _cell.length_c 61.38 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6T5R _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 6T5R _atom_sites.fract_transf_matrix[1][1] 0.015939 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001901 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011196 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016407 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 A 1 301 301 PO4 PO4 . D 4 MKN B 1 201 201 MKN LIG . E 5 DMS B 1 202 301 DMS DMS . F 6 HOH A 1 401 544 HOH HOH . F 6 HOH A 2 402 463 HOH HOH . F 6 HOH A 3 403 486 HOH HOH . F 6 HOH A 4 404 446 HOH HOH . F 6 HOH A 5 405 476 HOH HOH . F 6 HOH A 6 406 426 HOH HOH . F 6 HOH A 7 407 459 HOH HOH . F 6 HOH A 8 408 525 HOH HOH . F 6 HOH A 9 409 409 HOH HOH . F 6 HOH A 10 410 431 HOH HOH . F 6 HOH A 11 411 415 HOH HOH . F 6 HOH A 12 412 414 HOH HOH . F 6 HOH A 13 413 404 HOH HOH . F 6 HOH A 14 414 429 HOH HOH . F 6 HOH A 15 415 513 HOH HOH . F 6 HOH A 16 416 427 HOH HOH . F 6 HOH A 17 417 526 HOH HOH . F 6 HOH A 18 418 454 HOH HOH . F 6 HOH A 19 419 416 HOH HOH . F 6 HOH A 20 420 442 HOH HOH . F 6 HOH A 21 421 529 HOH HOH . F 6 HOH A 22 422 524 HOH HOH . F 6 HOH A 23 423 530 HOH HOH . F 6 HOH A 24 424 461 HOH HOH . F 6 HOH A 25 425 417 HOH HOH . F 6 HOH A 26 426 405 HOH HOH . F 6 HOH A 27 427 435 HOH HOH . F 6 HOH A 28 428 407 HOH HOH . F 6 HOH A 29 429 451 HOH HOH . F 6 HOH A 30 430 410 HOH HOH . F 6 HOH A 31 431 527 HOH HOH . F 6 HOH A 32 432 458 HOH HOH . F 6 HOH A 33 433 406 HOH HOH . F 6 HOH A 34 434 482 HOH HOH . F 6 HOH A 35 435 490 HOH HOH . F 6 HOH A 36 436 462 HOH HOH . F 6 HOH A 37 437 436 HOH HOH . F 6 HOH A 38 438 440 HOH HOH . F 6 HOH A 39 439 543 HOH HOH . F 6 HOH A 40 440 408 HOH HOH . F 6 HOH A 41 441 481 HOH HOH . F 6 HOH A 42 442 480 HOH HOH . F 6 HOH A 43 443 412 HOH HOH . F 6 HOH A 44 444 510 HOH HOH . F 6 HOH A 45 445 489 HOH HOH . F 6 HOH A 46 446 550 HOH HOH . F 6 HOH A 47 447 443 HOH HOH . F 6 HOH A 48 448 531 HOH HOH . F 6 HOH A 49 449 474 HOH HOH . F 6 HOH A 50 450 464 HOH HOH . F 6 HOH A 51 451 495 HOH HOH . F 6 HOH A 52 452 424 HOH HOH . F 6 HOH A 53 453 541 HOH HOH . F 6 HOH A 54 454 473 HOH HOH . F 6 HOH A 55 455 522 HOH HOH . F 6 HOH A 56 456 401 HOH HOH . F 6 HOH A 57 457 418 HOH HOH . F 6 HOH A 58 458 455 HOH HOH . F 6 HOH A 59 459 445 HOH HOH . F 6 HOH A 60 460 505 HOH HOH . F 6 HOH A 61 461 523 HOH HOH . F 6 HOH A 62 462 514 HOH HOH . F 6 HOH A 63 463 411 HOH HOH . F 6 HOH A 64 464 428 HOH HOH . F 6 HOH A 65 465 545 HOH HOH . F 6 HOH A 66 466 532 HOH HOH . F 6 HOH A 67 467 425 HOH HOH . F 6 HOH A 68 468 403 HOH HOH . F 6 HOH A 69 469 402 HOH HOH . F 6 HOH A 70 470 452 HOH HOH . F 6 HOH A 71 471 534 HOH HOH . F 6 HOH A 72 472 433 HOH HOH . F 6 HOH A 73 473 508 HOH HOH . F 6 HOH A 74 474 498 HOH HOH . F 6 HOH A 75 475 549 HOH HOH . F 6 HOH A 76 476 485 HOH HOH . F 6 HOH A 77 477 444 HOH HOH . F 6 HOH A 78 478 477 HOH HOH . F 6 HOH A 79 479 511 HOH HOH . F 6 HOH A 80 480 502 HOH HOH . F 6 HOH A 81 481 423 HOH HOH . F 6 HOH A 82 482 413 HOH HOH . F 6 HOH A 83 483 467 HOH HOH . F 6 HOH A 84 484 493 HOH HOH . F 6 HOH A 85 485 448 HOH HOH . F 6 HOH A 86 486 533 HOH HOH . F 6 HOH A 87 487 492 HOH HOH . F 6 HOH A 88 488 496 HOH HOH . F 6 HOH A 89 489 506 HOH HOH . F 6 HOH A 90 490 450 HOH HOH . F 6 HOH A 91 491 537 HOH HOH . F 6 HOH A 92 492 500 HOH HOH . F 6 HOH A 93 493 466 HOH HOH . F 6 HOH A 94 494 453 HOH HOH . F 6 HOH A 95 495 504 HOH HOH . F 6 HOH A 96 496 438 HOH HOH . F 6 HOH A 97 497 447 HOH HOH . F 6 HOH A 98 498 528 HOH HOH . F 6 HOH A 99 499 437 HOH HOH . F 6 HOH A 100 500 542 HOH HOH . F 6 HOH A 101 501 456 HOH HOH . F 6 HOH A 102 502 472 HOH HOH . F 6 HOH A 103 503 457 HOH HOH . F 6 HOH A 104 504 420 HOH HOH . F 6 HOH A 105 505 540 HOH HOH . F 6 HOH A 106 506 487 HOH HOH . F 6 HOH A 107 507 439 HOH HOH . F 6 HOH A 108 508 546 HOH HOH . F 6 HOH A 109 509 484 HOH HOH . F 6 HOH A 110 510 478 HOH HOH . F 6 HOH A 111 511 503 HOH HOH . F 6 HOH A 112 512 471 HOH HOH . F 6 HOH A 113 513 501 HOH HOH . F 6 HOH A 114 514 497 HOH HOH . F 6 HOH A 115 515 551 HOH HOH . F 6 HOH A 116 516 547 HOH HOH . F 6 HOH A 117 517 548 HOH HOH . F 6 HOH A 118 518 488 HOH HOH . F 6 HOH A 119 519 441 HOH HOH . F 6 HOH A 120 520 460 HOH HOH . F 6 HOH A 121 521 419 HOH HOH . F 6 HOH A 122 522 422 HOH HOH . F 6 HOH A 123 523 494 HOH HOH . F 6 HOH A 124 524 538 HOH HOH . F 6 HOH A 125 525 483 HOH HOH . F 6 HOH A 126 526 479 HOH HOH . F 6 HOH A 127 527 449 HOH HOH . F 6 HOH A 128 528 434 HOH HOH . F 6 HOH A 129 529 421 HOH HOH . F 6 HOH A 130 530 539 HOH HOH . F 6 HOH A 131 531 509 HOH HOH . F 6 HOH A 132 532 432 HOH HOH . F 6 HOH A 133 533 468 HOH HOH . F 6 HOH A 134 534 475 HOH HOH . F 6 HOH A 135 535 430 HOH HOH . F 6 HOH A 136 536 521 HOH HOH . F 6 HOH A 137 537 491 HOH HOH . F 6 HOH A 138 538 536 HOH HOH . F 6 HOH A 139 539 520 HOH HOH . F 6 HOH A 140 540 518 HOH HOH . F 6 HOH A 141 541 517 HOH HOH . F 6 HOH A 142 542 515 HOH HOH . F 6 HOH A 143 543 516 HOH HOH . F 6 HOH A 144 544 469 HOH HOH . F 6 HOH A 145 545 507 HOH HOH . F 6 HOH A 146 546 465 HOH HOH . F 6 HOH A 147 547 512 HOH HOH . F 6 HOH A 148 548 519 HOH HOH . F 6 HOH A 149 549 552 HOH HOH . F 6 HOH A 150 550 535 HOH HOH . G 6 HOH B 1 301 476 HOH HOH . G 6 HOH B 2 302 545 HOH HOH . G 6 HOH B 3 303 501 HOH HOH . G 6 HOH B 4 304 419 HOH HOH . G 6 HOH B 5 305 490 HOH HOH . G 6 HOH B 6 306 563 HOH HOH . G 6 HOH B 7 307 567 HOH HOH . G 6 HOH B 8 308 550 HOH HOH . G 6 HOH B 9 309 447 HOH HOH . G 6 HOH B 10 310 411 HOH HOH . G 6 HOH B 11 311 538 HOH HOH . G 6 HOH B 12 312 504 HOH HOH . G 6 HOH B 13 313 440 HOH HOH . G 6 HOH B 14 314 428 HOH HOH . G 6 HOH B 15 315 455 HOH HOH . G 6 HOH B 16 316 460 HOH HOH . G 6 HOH B 17 317 407 HOH HOH . G 6 HOH B 18 318 429 HOH HOH . G 6 HOH B 19 319 449 HOH HOH . G 6 HOH B 20 320 410 HOH HOH . G 6 HOH B 21 321 539 HOH HOH . G 6 HOH B 22 322 416 HOH HOH . G 6 HOH B 23 323 546 HOH HOH . G 6 HOH B 24 324 553 HOH HOH . G 6 HOH B 25 325 448 HOH HOH . G 6 HOH B 26 326 426 HOH HOH . G 6 HOH B 27 327 406 HOH HOH . G 6 HOH B 28 328 454 HOH HOH . G 6 HOH B 29 329 427 HOH HOH . G 6 HOH B 30 330 412 HOH HOH . G 6 HOH B 31 331 463 HOH HOH . G 6 HOH B 32 332 517 HOH HOH . G 6 HOH B 33 333 443 HOH HOH . G 6 HOH B 34 334 408 HOH HOH . G 6 HOH B 35 335 475 HOH HOH . G 6 HOH B 36 336 488 HOH HOH . G 6 HOH B 37 337 489 HOH HOH . G 6 HOH B 38 338 485 HOH HOH . G 6 HOH B 39 339 531 HOH HOH . G 6 HOH B 40 340 457 HOH HOH . G 6 HOH B 41 341 469 HOH HOH . G 6 HOH B 42 342 511 HOH HOH . G 6 HOH B 43 343 451 HOH HOH . G 6 HOH B 44 344 435 HOH HOH . G 6 HOH B 45 345 522 HOH HOH . G 6 HOH B 46 346 540 HOH HOH . G 6 HOH B 47 347 444 HOH HOH . G 6 HOH B 48 348 417 HOH HOH . G 6 HOH B 49 349 436 HOH HOH . G 6 HOH B 50 350 425 HOH HOH . G 6 HOH B 51 351 470 HOH HOH . G 6 HOH B 52 352 403 HOH HOH . G 6 HOH B 53 353 516 HOH HOH . G 6 HOH B 54 354 482 HOH HOH . G 6 HOH B 55 355 433 HOH HOH . G 6 HOH B 56 356 509 HOH HOH . G 6 HOH B 57 357 409 HOH HOH . G 6 HOH B 58 358 472 HOH HOH . G 6 HOH B 59 359 543 HOH HOH . G 6 HOH B 60 360 459 HOH HOH . G 6 HOH B 61 361 430 HOH HOH . G 6 HOH B 62 362 418 HOH HOH . G 6 HOH B 63 363 561 HOH HOH . G 6 HOH B 64 364 414 HOH HOH . G 6 HOH B 65 365 466 HOH HOH . G 6 HOH B 66 366 493 HOH HOH . G 6 HOH B 67 367 461 HOH HOH . G 6 HOH B 68 368 405 HOH HOH . G 6 HOH B 69 369 464 HOH HOH . G 6 HOH B 70 370 413 HOH HOH . G 6 HOH B 71 371 515 HOH HOH . G 6 HOH B 72 372 434 HOH HOH . G 6 HOH B 73 373 481 HOH HOH . G 6 HOH B 74 374 500 HOH HOH . G 6 HOH B 75 375 420 HOH HOH . G 6 HOH B 76 376 424 HOH HOH . G 6 HOH B 77 377 568 HOH HOH . G 6 HOH B 78 378 431 HOH HOH . G 6 HOH B 79 379 450 HOH HOH . G 6 HOH B 80 380 492 HOH HOH . G 6 HOH B 81 381 479 HOH HOH . G 6 HOH B 82 382 423 HOH HOH . G 6 HOH B 83 383 560 HOH HOH . G 6 HOH B 84 384 544 HOH HOH . G 6 HOH B 85 385 487 HOH HOH . G 6 HOH B 86 386 458 HOH HOH . G 6 HOH B 87 387 462 HOH HOH . G 6 HOH B 88 388 432 HOH HOH . G 6 HOH B 89 389 564 HOH HOH . G 6 HOH B 90 390 507 HOH HOH . G 6 HOH B 91 391 415 HOH HOH . G 6 HOH B 92 392 552 HOH HOH . G 6 HOH B 93 393 524 HOH HOH . G 6 HOH B 94 394 510 HOH HOH . G 6 HOH B 95 395 542 HOH HOH . G 6 HOH B 96 396 526 HOH HOH . G 6 HOH B 97 397 484 HOH HOH . G 6 HOH B 98 398 558 HOH HOH . G 6 HOH B 99 399 401 HOH HOH . G 6 HOH B 100 400 402 HOH HOH . G 6 HOH B 101 401 477 HOH HOH . G 6 HOH B 102 402 438 HOH HOH . G 6 HOH B 103 403 474 HOH HOH . G 6 HOH B 104 404 471 HOH HOH . G 6 HOH B 105 405 541 HOH HOH . G 6 HOH B 106 406 508 HOH HOH . G 6 HOH B 107 407 437 HOH HOH . G 6 HOH B 108 408 537 HOH HOH . G 6 HOH B 109 409 421 HOH HOH . G 6 HOH B 110 410 439 HOH HOH . G 6 HOH B 111 411 494 HOH HOH . G 6 HOH B 112 412 441 HOH HOH . G 6 HOH B 113 413 422 HOH HOH . G 6 HOH B 114 414 562 HOH HOH . G 6 HOH B 115 415 498 HOH HOH . G 6 HOH B 116 416 551 HOH HOH . G 6 HOH B 117 417 565 HOH HOH . G 6 HOH B 118 418 557 HOH HOH . G 6 HOH B 119 419 491 HOH HOH . G 6 HOH B 120 420 514 HOH HOH . G 6 HOH B 121 421 470 HOH HOH . G 6 HOH B 122 422 496 HOH HOH . G 6 HOH B 123 423 554 HOH HOH . G 6 HOH B 124 424 445 HOH HOH . G 6 HOH B 125 425 556 HOH HOH . G 6 HOH B 126 426 520 HOH HOH . G 6 HOH B 127 427 404 HOH HOH . G 6 HOH B 128 428 521 HOH HOH . G 6 HOH B 129 429 549 HOH HOH . G 6 HOH B 130 430 499 HOH HOH . G 6 HOH B 131 431 453 HOH HOH . G 6 HOH B 132 432 502 HOH HOH . G 6 HOH B 133 433 547 HOH HOH . G 6 HOH B 134 434 513 HOH HOH . G 6 HOH B 135 435 555 HOH HOH . G 6 HOH B 136 436 559 HOH HOH . G 6 HOH B 137 437 468 HOH HOH . G 6 HOH B 138 438 503 HOH HOH . G 6 HOH B 139 439 478 HOH HOH . G 6 HOH B 140 440 566 HOH HOH . G 6 HOH B 141 441 442 HOH HOH . G 6 HOH B 142 442 480 HOH HOH . G 6 HOH B 143 443 506 HOH HOH . G 6 HOH B 144 444 519 HOH HOH . G 6 HOH B 145 445 465 HOH HOH . G 6 HOH B 146 446 446 HOH HOH . G 6 HOH B 147 447 529 HOH HOH . G 6 HOH B 148 448 456 HOH HOH . G 6 HOH B 149 449 527 HOH HOH . G 6 HOH B 150 450 495 HOH HOH . G 6 HOH B 151 451 512 HOH HOH . G 6 HOH B 152 452 452 HOH HOH . G 6 HOH B 153 453 518 HOH HOH . G 6 HOH B 154 454 548 HOH HOH . G 6 HOH B 155 455 486 HOH HOH . G 6 HOH B 156 456 483 HOH HOH . G 6 HOH B 157 457 467 HOH HOH . G 6 HOH B 158 458 528 HOH HOH . G 6 HOH B 159 459 523 HOH HOH . G 6 HOH B 160 460 530 HOH HOH . G 6 HOH B 161 461 535 HOH HOH . G 6 HOH B 162 462 525 HOH HOH . G 6 HOH B 163 463 473 HOH HOH . G 6 HOH B 164 464 497 HOH HOH . G 6 HOH B 165 465 532 HOH HOH . G 6 HOH B 166 466 505 HOH HOH . G 6 HOH B 167 467 533 HOH HOH . G 6 HOH B 168 468 536 HOH HOH . G 6 HOH B 169 469 499 HOH HOH . G 6 HOH B 170 470 534 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . E 5 3.327 -15.763 59.669 1 66.78 ? S DMS 202 B 1 HETATM 2 O O DMS . . . E 5 2.955 -15.847 61.134 1 43.21 ? O DMS 202 B 1 HETATM 3 C C1 DMS . . . E 5 5.106 -15.906 59.623 1 57.18 ? C1 DMS 202 B 1 HETATM 4 C C2 DMS . . . E 5 2.907 -17.344 58.963 1 58.41 ? C2 DMS 202 B 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #