data_6T65 # _model_server_result.job_id peGCoKURW5lajr4OHIW0zg _model_server_result.datetime_utc '2024-11-27 07:58:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6t65 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 6T65 # _exptl.entry_id 6T65 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 417.296 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ethyl 6-bromanyl-2-[(dimethylamino)methyl]-5-oxidanyl-1-phenyl-indole-3-carboxylate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.06 _cell.angle_gamma 90 _cell.entry_id 6T65 _cell.length_a 60.065 _cell.length_b 128.738 _cell.length_c 65.747 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6T65 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H21 Br N2 O3' _chem_comp.formula_weight 417.296 _chem_comp.id MLH _chem_comp.mon_nstd_flag . _chem_comp.name 'ethyl 6-bromanyl-2-[(dimethylamino)methyl]-5-oxidanyl-1-phenyl-indole-3-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAJ CAB MLH sing 224 n n CAB CAA MLH doub 225 n y CAB CAC MLH sing 226 n y OAN CAL MLH doub 227 n n CAA CAF MLH sing 228 n y CAP CAO MLH sing 229 n n BR1 CAC MLH sing 230 n n CAC CAD MLH doub 231 n y CAL CAI MLH sing 232 n n CAL OAM MLH sing 233 n n CAF CAI MLH sing 234 n y CAF CAE MLH doub 235 n y CAO OAM MLH sing 236 n n CAI CAH MLH doub 237 n y CAD CAE MLH sing 238 n y CAE NAG MLH sing 239 n y CAH NAG MLH sing 240 n y CAH CAR MLH sing 241 n n NAG CAQ MLH sing 242 n n CAX CAQ MLH doub 243 n y CAX CAW MLH sing 244 n y CAR NAY MLH sing 245 n n CAQ CAT MLH sing 246 n y CBA NAY MLH sing 247 n n NAY CAZ MLH sing 248 n n CAW CAV MLH doub 249 n y CAT CAU MLH doub 250 n y CAV CAU MLH sing 251 n y CAP H1 MLH sing 252 n n CAP H2 MLH sing 253 n n CAP H3 MLH sing 254 n n CAO H4 MLH sing 255 n n CAO H5 MLH sing 256 n n CAR H6 MLH sing 257 n n CAR H7 MLH sing 258 n n CAZ H9 MLH sing 259 n n CAZ H10 MLH sing 260 n n CAZ H11 MLH sing 261 n n CBA H12 MLH sing 262 n n CBA H13 MLH sing 263 n n CBA H14 MLH sing 264 n n CAA H15 MLH sing 265 n n OAJ H16 MLH sing 266 n n CAD H17 MLH sing 267 n n CAT H18 MLH sing 268 n n CAU H19 MLH sing 269 n n CAV H20 MLH sing 270 n n CAW H21 MLH sing 271 n n CAX H22 MLH sing 272 n n # _atom_sites.entry_id 6T65 _atom_sites.fract_transf_matrix[1][1] 0.016649 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007086 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007768 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01653 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MLH C 1 301 1 MLH 9C1 . F 3 HOH A 1 301 95 HOH HOH . F 3 HOH A 2 302 8 HOH HOH . F 3 HOH A 3 303 79 HOH HOH . F 3 HOH A 4 304 44 HOH HOH . F 3 HOH A 5 305 123 HOH HOH . F 3 HOH A 6 306 74 HOH HOH . F 3 HOH A 7 307 72 HOH HOH . F 3 HOH A 8 308 19 HOH HOH . F 3 HOH A 9 309 61 HOH HOH . F 3 HOH A 10 310 69 HOH HOH . F 3 HOH A 11 311 162 HOH HOH . F 3 HOH A 12 312 2 HOH HOH . F 3 HOH A 13 313 132 HOH HOH . F 3 HOH A 14 314 159 HOH HOH . F 3 HOH A 15 315 76 HOH HOH . F 3 HOH A 16 316 161 HOH HOH . F 3 HOH A 17 317 11 HOH HOH . F 3 HOH A 18 318 65 HOH HOH . F 3 HOH A 19 319 6 HOH HOH . F 3 HOH A 20 320 13 HOH HOH . F 3 HOH A 21 321 22 HOH HOH . F 3 HOH A 22 322 35 HOH HOH . F 3 HOH A 23 323 21 HOH HOH . F 3 HOH A 24 324 27 HOH HOH . F 3 HOH A 25 325 129 HOH HOH . F 3 HOH A 26 326 64 HOH HOH . F 3 HOH A 27 327 47 HOH HOH . F 3 HOH A 28 328 70 HOH HOH . F 3 HOH A 29 329 12 HOH HOH . F 3 HOH A 30 330 56 HOH HOH . F 3 HOH A 31 331 98 HOH HOH . F 3 HOH A 32 332 138 HOH HOH . F 3 HOH A 33 333 43 HOH HOH . F 3 HOH A 34 334 142 HOH HOH . F 3 HOH A 35 335 36 HOH HOH . F 3 HOH A 36 336 160 HOH HOH . F 3 HOH A 37 337 92 HOH HOH . F 3 HOH A 38 338 71 HOH HOH . F 3 HOH A 39 339 91 HOH HOH . F 3 HOH A 40 340 32 HOH HOH . F 3 HOH A 41 341 163 HOH HOH . F 3 HOH A 42 342 93 HOH HOH . F 3 HOH A 43 343 97 HOH HOH . F 3 HOH A 44 344 81 HOH HOH . F 3 HOH A 45 345 125 HOH HOH . G 3 HOH B 1 301 100 HOH HOH . G 3 HOH B 2 302 85 HOH HOH . G 3 HOH B 3 303 73 HOH HOH . G 3 HOH B 4 304 145 HOH HOH . G 3 HOH B 5 305 90 HOH HOH . G 3 HOH B 6 306 66 HOH HOH . G 3 HOH B 7 307 10 HOH HOH . G 3 HOH B 8 308 45 HOH HOH . G 3 HOH B 9 309 139 HOH HOH . G 3 HOH B 10 310 105 HOH HOH . G 3 HOH B 11 311 16 HOH HOH . G 3 HOH B 12 312 103 HOH HOH . G 3 HOH B 13 313 158 HOH HOH . G 3 HOH B 14 314 146 HOH HOH . G 3 HOH B 15 315 41 HOH HOH . G 3 HOH B 16 316 62 HOH HOH . G 3 HOH B 17 317 17 HOH HOH . G 3 HOH B 18 318 3 HOH HOH . G 3 HOH B 19 319 96 HOH HOH . G 3 HOH B 20 320 108 HOH HOH . G 3 HOH B 21 321 102 HOH HOH . G 3 HOH B 22 322 40 HOH HOH . G 3 HOH B 23 323 1 HOH HOH . G 3 HOH B 24 324 25 HOH HOH . G 3 HOH B 25 325 14 HOH HOH . G 3 HOH B 26 326 143 HOH HOH . G 3 HOH B 27 327 33 HOH HOH . G 3 HOH B 28 328 31 HOH HOH . G 3 HOH B 29 329 126 HOH HOH . G 3 HOH B 30 330 110 HOH HOH . G 3 HOH B 31 331 89 HOH HOH . G 3 HOH B 32 332 87 HOH HOH . G 3 HOH B 33 333 38 HOH HOH . G 3 HOH B 34 334 157 HOH HOH . G 3 HOH B 35 335 137 HOH HOH . G 3 HOH B 36 336 26 HOH HOH . G 3 HOH B 37 337 58 HOH HOH . G 3 HOH B 38 338 39 HOH HOH . G 3 HOH B 39 339 52 HOH HOH . G 3 HOH B 40 340 101 HOH HOH . G 3 HOH B 41 341 140 HOH HOH . G 3 HOH B 42 342 83 HOH HOH . G 3 HOH B 43 343 141 HOH HOH . G 3 HOH B 44 344 109 HOH HOH . G 3 HOH B 45 345 144 HOH HOH . G 3 HOH B 46 346 104 HOH HOH . G 3 HOH B 47 347 84 HOH HOH . G 3 HOH B 48 348 156 HOH HOH . G 3 HOH B 49 349 82 HOH HOH . G 3 HOH B 50 350 28 HOH HOH . G 3 HOH B 51 351 154 HOH HOH . G 3 HOH B 52 352 155 HOH HOH . H 3 HOH C 1 401 151 HOH HOH . H 3 HOH C 2 402 53 HOH HOH . H 3 HOH C 3 403 60 HOH HOH . H 3 HOH C 4 404 48 HOH HOH . H 3 HOH C 5 405 57 HOH HOH . H 3 HOH C 6 406 42 HOH HOH . H 3 HOH C 7 407 152 HOH HOH . H 3 HOH C 8 408 115 HOH HOH . H 3 HOH C 9 409 29 HOH HOH . H 3 HOH C 10 410 111 HOH HOH . H 3 HOH C 11 411 116 HOH HOH . H 3 HOH C 12 412 78 HOH HOH . H 3 HOH C 13 413 164 HOH HOH . H 3 HOH C 14 414 7 HOH HOH . H 3 HOH C 15 415 148 HOH HOH . H 3 HOH C 16 416 23 HOH HOH . H 3 HOH C 17 417 55 HOH HOH . H 3 HOH C 18 418 150 HOH HOH . H 3 HOH C 19 419 86 HOH HOH . H 3 HOH C 20 420 5 HOH HOH . H 3 HOH C 21 421 37 HOH HOH . H 3 HOH C 22 422 149 HOH HOH . H 3 HOH C 23 423 80 HOH HOH . H 3 HOH C 24 424 51 HOH HOH . H 3 HOH C 25 425 24 HOH HOH . H 3 HOH C 26 426 117 HOH HOH . H 3 HOH C 27 427 113 HOH HOH . H 3 HOH C 28 428 153 HOH HOH . H 3 HOH C 29 429 77 HOH HOH . H 3 HOH C 30 430 127 HOH HOH . H 3 HOH C 31 431 128 HOH HOH . H 3 HOH C 32 432 112 HOH HOH . I 3 HOH D 1 301 133 HOH HOH . I 3 HOH D 2 302 34 HOH HOH . I 3 HOH D 3 303 118 HOH HOH . I 3 HOH D 4 304 18 HOH HOH . I 3 HOH D 5 305 59 HOH HOH . I 3 HOH D 6 306 46 HOH HOH . I 3 HOH D 7 307 99 HOH HOH . I 3 HOH D 8 308 165 HOH HOH . I 3 HOH D 9 309 63 HOH HOH . I 3 HOH D 10 310 67 HOH HOH . I 3 HOH D 11 311 49 HOH HOH . I 3 HOH D 12 312 134 HOH HOH . I 3 HOH D 13 313 54 HOH HOH . I 3 HOH D 14 314 9 HOH HOH . I 3 HOH D 15 315 15 HOH HOH . I 3 HOH D 16 316 50 HOH HOH . I 3 HOH D 17 317 88 HOH HOH . I 3 HOH D 18 318 131 HOH HOH . I 3 HOH D 19 319 4 HOH HOH . I 3 HOH D 20 320 20 HOH HOH . I 3 HOH D 21 321 30 HOH HOH . I 3 HOH D 22 322 119 HOH HOH . I 3 HOH D 23 323 75 HOH HOH . I 3 HOH D 24 324 147 HOH HOH . I 3 HOH D 25 325 130 HOH HOH . I 3 HOH D 26 326 135 HOH HOH . I 3 HOH D 27 327 121 HOH HOH . I 3 HOH D 28 328 124 HOH HOH . I 3 HOH D 29 329 107 HOH HOH . I 3 HOH D 30 330 94 HOH HOH . I 3 HOH D 31 331 68 HOH HOH . I 3 HOH D 32 332 120 HOH HOH . I 3 HOH D 33 333 136 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAP MLH . . . E 2 11.869 -1.02 -21.244 1 71.93 ? CAP MLH 301 C 1 HETATM 2 C CAO MLH . . . E 2 11.956 0.076 -20.158 1 73.24 ? CAO MLH 301 C 1 HETATM 3 O OAM MLH . . . E 2 13.245 0.112 -19.5 1 69.69 ? OAM MLH 301 C 1 HETATM 4 C CAL MLH . . . E 2 14.237 0.651 -20.25 1 68.67 ? CAL MLH 301 C 1 HETATM 5 O OAN MLH . . . E 2 14.114 0.874 -21.452 1 69.61 ? OAN MLH 301 C 1 HETATM 6 C CAI MLH . . . E 2 15.416 0.835 -19.642 1 66.55 ? CAI MLH 301 C 1 HETATM 7 C CAH MLH . . . E 2 15.7 0.727 -18.334 1 59.45 ? CAH MLH 301 C 1 HETATM 8 C CAR MLH . . . E 2 14.83 0.149 -17.218 1 58.05 ? CAR MLH 301 C 1 HETATM 9 N NAY MLH . . . E 2 14.45 1.276 -16.336 1 55.9 ? NAY MLH 301 C 1 HETATM 10 C CAZ MLH . . . E 2 13.813 0.879 -15.059 1 51.79 ? CAZ MLH 301 C 1 HETATM 11 C CBA MLH . . . E 2 13.612 2.229 -17.078 1 55.11 ? CBA MLH 301 C 1 HETATM 12 C CAF MLH . . . E 2 16.468 1.455 -20.221 1 67.33 ? CAF MLH 301 C 1 HETATM 13 C CAA MLH . . . E 2 16.676 2.025 -21.415 1 68 ? CAA MLH 301 C 1 HETATM 14 C CAB MLH . . . E 2 17.888 2.658 -21.655 1 71.01 ? CAB MLH 301 C 1 HETATM 15 O OAJ MLH . . . E 2 18.205 3.251 -22.835 1 69.61 ? OAJ MLH 301 C 1 HETATM 16 C CAC MLH . . . E 2 18.849 2.722 -20.659 1 76.31 ? CAC MLH 301 C 1 HETATM 17 BR BR1 MLH . . . E 2 20.514 3.575 -20.916 1 97.28 ? BR1 MLH 301 C 1 HETATM 18 C CAD MLH . . . E 2 18.571 2.149 -19.439 1 69.91 ? CAD MLH 301 C 1 HETATM 19 C CAE MLH . . . E 2 17.389 1.577 -19.25 1 67.64 ? CAE MLH 301 C 1 HETATM 20 N NAG MLH . . . E 2 16.967 0.958 -18.192 1 61.52 ? NAG MLH 301 C 1 HETATM 21 C CAQ MLH . . . E 2 17.707 0.759 -17.127 1 56.05 ? CAQ MLH 301 C 1 HETATM 22 C CAT MLH . . . E 2 17.615 1.504 -15.971 1 55.74 ? CAT MLH 301 C 1 HETATM 23 C CAU MLH . . . E 2 18.438 1.18 -14.895 1 54.36 ? CAU MLH 301 C 1 HETATM 24 C CAV MLH . . . E 2 19.35 0.136 -14.984 1 55.58 ? CAV MLH 301 C 1 HETATM 25 C CAW MLH . . . E 2 19.429 -0.609 -16.162 1 58.04 ? CAW MLH 301 C 1 HETATM 26 C CAX MLH . . . E 2 18.603 -0.297 -17.227 1 54.74 ? CAX MLH 301 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #