data_6T73
#
_model_server_result.job_id            2PFx9Q2l9sm_pK8EkvwicQ 
_model_server_result.datetime_utc      '2024-11-28 16:57:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6t73 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":500}' 
#
_entry.id    6T73 
#
_exptl.entry_id    6T73 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6T73 
_cell.length_a            168.374 
_cell.length_b            168.374 
_cell.length_c            95.711 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6T73 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,D,E,F,G,H 1 1 
C,I 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 11_555 -x+y,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 47.8555 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 I N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 83 n n 
N1 C10 FMN doub 84 n n 
C2 O2 FMN doub 85 n n 
C2 N3 FMN sing 86 n n 
N3 C4 FMN sing 87 n n 
N3 HN3 FMN sing 88 n n 
C4 O4 FMN doub 89 n n 
C4 C4A FMN sing 90 n n 
C4A N5 FMN doub 91 n n 
C4A C10 FMN sing 92 n n 
N5 C5A FMN sing 93 n n 
C5A C6 FMN doub 94 n y 
C5A C9A FMN sing 95 n y 
C6 C7 FMN sing 96 n y 
C6 H6 FMN sing 97 n n 
C7 C7M FMN sing 98 n n 
C7 C8 FMN doub 99 n y 
C7M HM71 FMN sing 100 n n 
C7M HM72 FMN sing 101 n n 
C7M HM73 FMN sing 102 n n 
C8 C8M FMN sing 103 n n 
C8 C9 FMN sing 104 n y 
C8M HM81 FMN sing 105 n n 
C8M HM82 FMN sing 106 n n 
C8M HM83 FMN sing 107 n n 
C9 C9A FMN doub 108 n y 
C9 H9 FMN sing 109 n n 
C9A N10 FMN sing 110 n n 
N10 C10 FMN sing 111 n n 
N10 C1' FMN sing 112 n n 
C1' C2' FMN sing 113 n n 
C1' "H1'1" FMN sing 114 n n 
C1' "H1'2" FMN sing 115 n n 
C2' O2' FMN sing 116 n n 
C2' C3' FMN sing 117 n n 
C2' H2' FMN sing 118 n n 
O2' HO2' FMN sing 119 n n 
C3' O3' FMN sing 120 n n 
C3' C4' FMN sing 121 n n 
C3' H3' FMN sing 122 n n 
O3' HO3' FMN sing 123 n n 
C4' O4' FMN sing 124 n n 
C4' C5' FMN sing 125 n n 
C4' H4' FMN sing 126 n n 
O4' HO4' FMN sing 127 n n 
C5' O5' FMN sing 128 n n 
C5' "H5'1" FMN sing 129 n n 
C5' "H5'2" FMN sing 130 n n 
O5' P FMN sing 131 n n 
P O1P FMN doub 132 n n 
P O2P FMN sing 133 n n 
P O3P FMN sing 134 n n 
O2P HOP2 FMN sing 135 n n 
O3P HOP3 FMN sing 136 n n 
#
_atom_sites.entry_id                     6T73 
_atom_sites.fract_transf_matrix[1][1]    0.005939 
_atom_sites.fract_transf_matrix[1][2]    0.003429 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006858 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010448 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 FMN A 1 500 500 FMN FMN . 
E 2 FMN B 1 401 500 FMN FMN . 
F 3 CL B 1 402 1 CL CL . 
G 3 CL B 1 403 2 CL CL . 
H 3 CL B 1 404 3 CL CL . 
I 2 FMN C 1 500 500 FMN FMN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . D 2 10.433 67.782 -9.626 1 112.59 ? N1 FMN 500 A 1 
HETATM 2 C C2 FMN . . . D 2 10.849 69.088 -9.784 1 112.59 ? C2 FMN 500 A 1 
HETATM 3 O O2 FMN . . . D 2 10.38 69.777 -10.688 1 112.59 ? O2 FMN 500 A 1 
HETATM 4 N N3 FMN . . . D 2 11.792 69.626 -8.931 1 112.59 ? N3 FMN 500 A 1 
HETATM 5 C C4 FMN . . . D 2 12.322 68.858 -7.916 1 112.59 ? C4 FMN 500 A 1 
HETATM 6 O O4 FMN . . . D 2 13.162 69.336 -7.155 1 112.59 ? O4 FMN 500 A 1 
HETATM 7 C C4A FMN . . . D 2 11.907 67.543 -7.752 1 112.59 ? C4A FMN 500 A 1 
HETATM 8 N N5 FMN . . . D 2 12.435 66.772 -6.737 1 112.59 ? N5 FMN 500 A 1 
HETATM 9 C C5A FMN . . . D 2 12.022 65.466 -6.577 1 112.59 ? C5A FMN 500 A 1 
HETATM 10 C C6 FMN . . . D 2 12.554 64.689 -5.555 1 112.59 ? C6 FMN 500 A 1 
HETATM 11 C C7 FMN . . . D 2 12.138 63.373 -5.392 1 112.59 ? C7 FMN 500 A 1 
HETATM 12 C C7M FMN . . . D 2 12.716 62.538 -4.287 1 112.59 ? C7M FMN 500 A 1 
HETATM 13 C C8 FMN . . . D 2 11.189 62.833 -6.253 1 112.59 ? C8 FMN 500 A 1 
HETATM 14 C C8M FMN . . . D 2 10.736 61.413 -6.082 1 112.59 ? C8M FMN 500 A 1 
HETATM 15 C C9 FMN . . . D 2 10.658 63.61 -7.274 1 112.59 ? C9 FMN 500 A 1 
HETATM 16 C C9A FMN . . . D 2 11.073 64.927 -7.438 1 112.59 ? C9A FMN 500 A 1 
HETATM 17 N N10 FMN . . . D 2 10.541 65.702 -8.449 1 112.59 ? N10 FMN 500 A 1 
HETATM 18 C C10 FMN . . . D 2 10.959 67.006 -8.613 1 112.59 ? C10 FMN 500 A 1 
HETATM 19 C C1' FMN . . . D 2 9.525 65.118 -9.385 1 112.59 ? C1' FMN 500 A 1 
HETATM 20 C C2' FMN . . . D 2 8.101 65.4 -8.927 1 112.59 ? C2' FMN 500 A 1 
HETATM 21 O O2' FMN . . . D 2 7.981 65.176 -7.541 1 112.59 ? O2' FMN 500 A 1 
HETATM 22 C C3' FMN . . . D 2 7.149 64.481 -9.68 1 112.59 ? C3' FMN 500 A 1 
HETATM 23 O O3' FMN . . . D 2 7.467 63.138 -9.395 1 112.59 ? O3' FMN 500 A 1 
HETATM 24 C C4' FMN . . . D 2 7.259 64.725 -11.18 1 112.59 ? C4' FMN 500 A 1 
HETATM 25 O O4' FMN . . . D 2 6.538 65.889 -11.519 1 112.59 ? O4' FMN 500 A 1 
HETATM 26 C C5' FMN . . . D 2 6.707 63.552 -11.977 1 112.59 ? C5' FMN 500 A 1 
HETATM 27 O O5' FMN . . . D 2 5.465 63.175 -11.43 1 112.59 ? O5' FMN 500 A 1 
HETATM 28 P P FMN . . . D 2 4.109 63.501 -12.229 1 112.59 ? P FMN 500 A 1 
HETATM 29 O O1P FMN . . . D 2 4.231 62.969 -13.637 1 112.59 ? O1P FMN 500 A 1 
HETATM 30 O O2P FMN . . . D 2 3.898 64.996 -12.262 1 112.59 ? O2P FMN 500 A 1 
HETATM 31 O O3P FMN . . . D 2 2.944 62.836 -11.536 1 112.59 ? O3P FMN 500 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           248 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           31 
#