data_6T8R # _model_server_result.job_id tKpewOplLcxmUecmw44nuw _model_server_result.datetime_utc '2024-11-22 00:46:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6t8r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":205}' # _entry.id 6T8R # _exptl.entry_id 6T8R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.49 _cell.angle_gamma 90 _cell.entry_id 6T8R _cell.length_a 62.953 _cell.length_b 89.825 _cell.length_c 60.878 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6T8R _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 J N N ? 5 K N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 6T8R _atom_sites.fract_transf_matrix[1][1] 0.015885 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001807 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011133 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016532 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GVY A 1 201 2 GVY LIG . D 4 PO4 A 1 202 4 PO4 PO4 . E 4 PO4 A 1 203 5 PO4 PO4 . F 5 DMS A 1 204 6 DMS DMS . G 5 DMS A 1 205 8 DMS DMS . H 3 GVY B 1 201 1 GVY LIG . I 4 PO4 B 1 202 3 PO4 PO4 . J 5 DMS B 1 203 7 DMS DMS . K 5 DMS B 1 204 9 DMS DMS . L 6 HOH A 1 301 8 HOH HOH . L 6 HOH A 2 302 104 HOH HOH . L 6 HOH A 3 303 166 HOH HOH . L 6 HOH A 4 304 204 HOH HOH . L 6 HOH A 5 305 188 HOH HOH . L 6 HOH A 6 306 216 HOH HOH . L 6 HOH A 7 307 79 HOH HOH . L 6 HOH A 8 308 44 HOH HOH . L 6 HOH A 9 309 112 HOH HOH . L 6 HOH A 10 310 71 HOH HOH . L 6 HOH A 11 311 22 HOH HOH . L 6 HOH A 12 312 24 HOH HOH . L 6 HOH A 13 313 88 HOH HOH . L 6 HOH A 14 314 108 HOH HOH . L 6 HOH A 15 315 206 HOH HOH . L 6 HOH A 16 316 90 HOH HOH . L 6 HOH A 17 317 115 HOH HOH . L 6 HOH A 18 318 74 HOH HOH . L 6 HOH A 19 319 49 HOH HOH . L 6 HOH A 20 320 10 HOH HOH . L 6 HOH A 21 321 213 HOH HOH . L 6 HOH A 22 322 149 HOH HOH . L 6 HOH A 23 323 175 HOH HOH . L 6 HOH A 24 324 17 HOH HOH . L 6 HOH A 25 325 98 HOH HOH . L 6 HOH A 26 326 62 HOH HOH . L 6 HOH A 27 327 54 HOH HOH . L 6 HOH A 28 328 37 HOH HOH . L 6 HOH A 29 329 35 HOH HOH . L 6 HOH A 30 330 16 HOH HOH . L 6 HOH A 31 331 13 HOH HOH . L 6 HOH A 32 332 57 HOH HOH . L 6 HOH A 33 333 20 HOH HOH . L 6 HOH A 34 334 53 HOH HOH . L 6 HOH A 35 335 148 HOH HOH . L 6 HOH A 36 336 217 HOH HOH . L 6 HOH A 37 337 113 HOH HOH . L 6 HOH A 38 338 65 HOH HOH . L 6 HOH A 39 339 203 HOH HOH . L 6 HOH A 40 340 39 HOH HOH . L 6 HOH A 41 341 184 HOH HOH . L 6 HOH A 42 342 47 HOH HOH . L 6 HOH A 43 343 63 HOH HOH . L 6 HOH A 44 344 106 HOH HOH . L 6 HOH A 45 345 193 HOH HOH . L 6 HOH A 46 346 85 HOH HOH . L 6 HOH A 47 347 134 HOH HOH . L 6 HOH A 48 348 190 HOH HOH . L 6 HOH A 49 349 207 HOH HOH . L 6 HOH A 50 350 28 HOH HOH . L 6 HOH A 51 351 120 HOH HOH . L 6 HOH A 52 352 210 HOH HOH . L 6 HOH A 53 353 185 HOH HOH . L 6 HOH A 54 354 38 HOH HOH . L 6 HOH A 55 355 6 HOH HOH . L 6 HOH A 56 356 239 HOH HOH . L 6 HOH A 57 357 50 HOH HOH . L 6 HOH A 58 358 69 HOH HOH . L 6 HOH A 59 359 30 HOH HOH . L 6 HOH A 60 360 215 HOH HOH . L 6 HOH A 61 361 208 HOH HOH . L 6 HOH A 62 362 58 HOH HOH . L 6 HOH A 63 363 183 HOH HOH . L 6 HOH A 64 364 146 HOH HOH . L 6 HOH A 65 365 93 HOH HOH . L 6 HOH A 66 366 202 HOH HOH . L 6 HOH A 67 367 72 HOH HOH . L 6 HOH A 68 368 33 HOH HOH . L 6 HOH A 69 369 194 HOH HOH . L 6 HOH A 70 370 46 HOH HOH . L 6 HOH A 71 371 52 HOH HOH . L 6 HOH A 72 372 83 HOH HOH . L 6 HOH A 73 373 75 HOH HOH . L 6 HOH A 74 374 209 HOH HOH . L 6 HOH A 75 375 2 HOH HOH . L 6 HOH A 76 376 197 HOH HOH . L 6 HOH A 77 377 171 HOH HOH . L 6 HOH A 78 378 141 HOH HOH . L 6 HOH A 79 379 56 HOH HOH . L 6 HOH A 80 380 109 HOH HOH . L 6 HOH A 81 381 117 HOH HOH . L 6 HOH A 82 382 231 HOH HOH . L 6 HOH A 83 383 169 HOH HOH . L 6 HOH A 84 384 211 HOH HOH . L 6 HOH A 85 385 198 HOH HOH . L 6 HOH A 86 386 168 HOH HOH . L 6 HOH A 87 387 127 HOH HOH . L 6 HOH A 88 388 205 HOH HOH . L 6 HOH A 89 389 199 HOH HOH . L 6 HOH A 90 390 126 HOH HOH . L 6 HOH A 91 391 236 HOH HOH . L 6 HOH A 92 392 70 HOH HOH . L 6 HOH A 93 393 99 HOH HOH . L 6 HOH A 94 394 232 HOH HOH . L 6 HOH A 95 395 200 HOH HOH . L 6 HOH A 96 396 118 HOH HOH . L 6 HOH A 97 397 124 HOH HOH . L 6 HOH A 98 398 196 HOH HOH . L 6 HOH A 99 399 237 HOH HOH . L 6 HOH A 100 400 43 HOH HOH . L 6 HOH A 101 401 139 HOH HOH . L 6 HOH A 102 402 201 HOH HOH . L 6 HOH A 103 403 156 HOH HOH . L 6 HOH A 104 404 133 HOH HOH . L 6 HOH A 105 405 130 HOH HOH . L 6 HOH A 106 406 230 HOH HOH . L 6 HOH A 107 407 147 HOH HOH . L 6 HOH A 108 408 103 HOH HOH . L 6 HOH A 109 409 123 HOH HOH . L 6 HOH A 110 410 152 HOH HOH . L 6 HOH A 111 411 151 HOH HOH . L 6 HOH A 112 412 92 HOH HOH . L 6 HOH A 113 413 94 HOH HOH . L 6 HOH A 114 414 157 HOH HOH . L 6 HOH A 115 415 95 HOH HOH . L 6 HOH A 116 416 212 HOH HOH . L 6 HOH A 117 417 153 HOH HOH . L 6 HOH A 118 418 132 HOH HOH . M 6 HOH B 1 301 40 HOH HOH . M 6 HOH B 2 302 181 HOH HOH . M 6 HOH B 3 303 167 HOH HOH . M 6 HOH B 4 304 192 HOH HOH . M 6 HOH B 5 305 80 HOH HOH . M 6 HOH B 6 306 7 HOH HOH . M 6 HOH B 7 307 77 HOH HOH . M 6 HOH B 8 308 121 HOH HOH . M 6 HOH B 9 309 122 HOH HOH . M 6 HOH B 10 310 218 HOH HOH . M 6 HOH B 11 311 144 HOH HOH . M 6 HOH B 12 312 111 HOH HOH . M 6 HOH B 13 313 178 HOH HOH . M 6 HOH B 14 314 138 HOH HOH . M 6 HOH B 15 315 76 HOH HOH . M 6 HOH B 16 316 1 HOH HOH . M 6 HOH B 17 317 23 HOH HOH . M 6 HOH B 18 318 91 HOH HOH . M 6 HOH B 19 319 18 HOH HOH . M 6 HOH B 20 320 11 HOH HOH . M 6 HOH B 21 321 4 HOH HOH . M 6 HOH B 22 322 19 HOH HOH . M 6 HOH B 23 323 25 HOH HOH . M 6 HOH B 24 324 68 HOH HOH . M 6 HOH B 25 325 78 HOH HOH . M 6 HOH B 26 326 41 HOH HOH . M 6 HOH B 27 327 180 HOH HOH . M 6 HOH B 28 328 89 HOH HOH . M 6 HOH B 29 329 114 HOH HOH . M 6 HOH B 30 330 61 HOH HOH . M 6 HOH B 31 331 86 HOH HOH . M 6 HOH B 32 332 187 HOH HOH . M 6 HOH B 33 333 81 HOH HOH . M 6 HOH B 34 334 5 HOH HOH . M 6 HOH B 35 335 165 HOH HOH . M 6 HOH B 36 336 97 HOH HOH . M 6 HOH B 37 337 145 HOH HOH . M 6 HOH B 38 338 164 HOH HOH . M 6 HOH B 39 339 173 HOH HOH . M 6 HOH B 40 340 150 HOH HOH . M 6 HOH B 41 341 32 HOH HOH . M 6 HOH B 42 342 220 HOH HOH . M 6 HOH B 43 343 51 HOH HOH . M 6 HOH B 44 344 214 HOH HOH . M 6 HOH B 45 345 225 HOH HOH . M 6 HOH B 46 346 182 HOH HOH . M 6 HOH B 47 347 172 HOH HOH . M 6 HOH B 48 348 60 HOH HOH . M 6 HOH B 49 349 137 HOH HOH . M 6 HOH B 50 350 66 HOH HOH . M 6 HOH B 51 351 9 HOH HOH . M 6 HOH B 52 352 36 HOH HOH . M 6 HOH B 53 353 14 HOH HOH . M 6 HOH B 54 354 223 HOH HOH . M 6 HOH B 55 355 179 HOH HOH . M 6 HOH B 56 356 229 HOH HOH . M 6 HOH B 57 357 125 HOH HOH . M 6 HOH B 58 358 21 HOH HOH . M 6 HOH B 59 359 235 HOH HOH . M 6 HOH B 60 360 15 HOH HOH . M 6 HOH B 61 361 186 HOH HOH . M 6 HOH B 62 362 170 HOH HOH . M 6 HOH B 63 363 3 HOH HOH . M 6 HOH B 64 364 55 HOH HOH . M 6 HOH B 65 365 42 HOH HOH . M 6 HOH B 66 366 221 HOH HOH . M 6 HOH B 67 367 176 HOH HOH . M 6 HOH B 68 368 226 HOH HOH . M 6 HOH B 69 369 29 HOH HOH . M 6 HOH B 70 370 174 HOH HOH . M 6 HOH B 71 371 73 HOH HOH . M 6 HOH B 72 372 31 HOH HOH . M 6 HOH B 73 373 45 HOH HOH . M 6 HOH B 74 374 64 HOH HOH . M 6 HOH B 75 375 224 HOH HOH . M 6 HOH B 76 376 59 HOH HOH . M 6 HOH B 77 377 34 HOH HOH . M 6 HOH B 78 378 128 HOH HOH . M 6 HOH B 79 379 101 HOH HOH . M 6 HOH B 80 380 116 HOH HOH . M 6 HOH B 81 381 228 HOH HOH . M 6 HOH B 82 382 26 HOH HOH . M 6 HOH B 83 383 131 HOH HOH . M 6 HOH B 84 384 87 HOH HOH . M 6 HOH B 85 385 129 HOH HOH . M 6 HOH B 86 386 136 HOH HOH . M 6 HOH B 87 387 140 HOH HOH . M 6 HOH B 88 388 219 HOH HOH . M 6 HOH B 89 389 177 HOH HOH . M 6 HOH B 90 390 12 HOH HOH . M 6 HOH B 91 391 191 HOH HOH . M 6 HOH B 92 392 222 HOH HOH . M 6 HOH B 93 393 84 HOH HOH . M 6 HOH B 94 394 82 HOH HOH . M 6 HOH B 95 395 234 HOH HOH . M 6 HOH B 96 396 119 HOH HOH . M 6 HOH B 97 397 67 HOH HOH . M 6 HOH B 98 398 233 HOH HOH . M 6 HOH B 99 399 189 HOH HOH . M 6 HOH B 100 400 107 HOH HOH . M 6 HOH B 101 401 48 HOH HOH . M 6 HOH B 102 402 195 HOH HOH . M 6 HOH B 103 403 27 HOH HOH . M 6 HOH B 104 404 105 HOH HOH . M 6 HOH B 105 405 110 HOH HOH . M 6 HOH B 106 406 135 HOH HOH . M 6 HOH B 107 407 96 HOH HOH . M 6 HOH B 108 408 158 HOH HOH . M 6 HOH B 109 409 238 HOH HOH . M 6 HOH B 110 410 142 HOH HOH . M 6 HOH B 111 411 155 HOH HOH . M 6 HOH B 112 412 162 HOH HOH . M 6 HOH B 113 413 163 HOH HOH . M 6 HOH B 114 414 100 HOH HOH . M 6 HOH B 115 415 161 HOH HOH . M 6 HOH B 116 416 240 HOH HOH . M 6 HOH B 117 417 143 HOH HOH . M 6 HOH B 118 418 227 HOH HOH . M 6 HOH B 119 419 160 HOH HOH . M 6 HOH B 120 420 159 HOH HOH . M 6 HOH B 121 421 154 HOH HOH . M 6 HOH B 122 422 102 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . G 5 -1.644 5.758 105.947 1 74.09 ? S DMS 205 A 1 HETATM 2 O O DMS . . . G 5 -2.796 6.493 105.344 1 72.25 ? O DMS 205 A 1 HETATM 3 C C1 DMS . . . G 5 -1.844 5.884 107.715 1 68.02 ? C1 DMS 205 A 1 HETATM 4 C C2 DMS . . . G 5 -0.242 6.843 105.788 1 65.79 ? C2 DMS 205 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 65 _model_server_stats.create_model_time_ms 39 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #