data_6T99 # _model_server_result.job_id tehibviHNXg6N6IR6zR3yg _model_server_result.datetime_utc '2024-11-24 23:37:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6t99 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":103}' # _entry.id 6T99 # _exptl.entry_id 6T99 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 96.42 _cell.angle_beta 98.7 _cell.angle_gamma 103.36 _cell.entry_id 6T99 _cell.length_a 36.602 _cell.length_b 44.425 _cell.length_c 116.574 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6T99 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 ? trimeric 3 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,J,K,L,M,N,O,DA,EA,FA 1 1 D,E,F,P,Q,R,S,T,U,V,GA,HA,IA 2 1 G,H,I,W,X,Y,Z,AA,BA,CA,JA,KA,LA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 T N N ? 3 AA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 E OD1 ASN 47 E ASN 48 1_555 T NA NA . E NA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? metalc ? metalc2 E O TYR 64 E TYR 65 1_555 T NA NA . E NA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc3 E OG SER 66 E SER 67 1_555 T NA NA . E NA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc4 T NA NA . E NA 103 1_555 F OG1 THR 5 F THR 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc5 G O SER 52 G SER 53 1_555 AA NA NA . H NA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.721 ? metalc ? metalc6 H O SER 9 H SER 10 1_555 AA NA NA . H NA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.963 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6T99 _atom_sites.fract_transf_matrix[1][1] 0.027321 _atom_sites.fract_transf_matrix[1][2] 0.006486 _atom_sites.fract_transf_matrix[1][3] 0.005233 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023135 _atom_sites.fract_transf_matrix[2][3] 0.003574 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008781 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 2 MFU A 1 101 920 MFU MFU . K 2 MFU A 1 102 910 MFU MFU . L 2 MFU B 1 101 910 MFU MFU . M 2 MFU B 1 102 920 MFU MFU . N 2 MFU C 1 101 910 MFU MFU . O 2 MFU C 1 102 920 MFU MFU . P 2 MFU D 1 101 910 MFU MFU . Q 2 MFU D 1 102 920 MFU MFU . R 2 MFU E 1 101 920 MFU MFU . S 2 MFU E 1 102 910 MFU MFU . T 3 NA E 1 103 1 NA NA . U 2 MFU F 1 101 910 MFU MFU . V 2 MFU F 1 102 920 MFU MFU . W 2 MFU G 1 101 920 MFU MFU . X 2 MFU G 1 102 910 MFU MFU . Y 2 MFU H 1 101 910 MFU MFU . Z 2 MFU H 1 102 920 MFU MFU . AA 3 NA H 1 103 2 NA NA . BA 2 MFU I 1 101 910 MFU MFU . CA 2 MFU I 1 102 920 MFU MFU . DA 4 HOH A 1 201 36 HOH HOH . DA 4 HOH A 2 202 7 HOH HOH . DA 4 HOH A 3 203 10 HOH HOH . DA 4 HOH A 4 204 114 HOH HOH . DA 4 HOH A 5 205 43 HOH HOH . DA 4 HOH A 6 206 6 HOH HOH . DA 4 HOH A 7 207 98 HOH HOH . DA 4 HOH A 8 208 21 HOH HOH . DA 4 HOH A 9 209 66 HOH HOH . DA 4 HOH A 10 210 8 HOH HOH . DA 4 HOH A 11 211 102 HOH HOH . DA 4 HOH A 12 212 9 HOH HOH . DA 4 HOH A 13 213 95 HOH HOH . DA 4 HOH A 14 214 81 HOH HOH . DA 4 HOH A 15 215 101 HOH HOH . DA 4 HOH A 16 216 30 HOH HOH . DA 4 HOH A 17 217 19 HOH HOH . DA 4 HOH A 18 218 47 HOH HOH . DA 4 HOH A 19 219 57 HOH HOH . EA 4 HOH B 1 201 105 HOH HOH . EA 4 HOH B 2 202 56 HOH HOH . EA 4 HOH B 3 203 11 HOH HOH . EA 4 HOH B 4 204 12 HOH HOH . EA 4 HOH B 5 205 38 HOH HOH . EA 4 HOH B 6 206 48 HOH HOH . EA 4 HOH B 7 207 99 HOH HOH . EA 4 HOH B 8 208 27 HOH HOH . EA 4 HOH B 9 209 24 HOH HOH . EA 4 HOH B 10 210 37 HOH HOH . EA 4 HOH B 11 211 91 HOH HOH . FA 4 HOH C 1 201 70 HOH HOH . FA 4 HOH C 2 202 82 HOH HOH . FA 4 HOH C 3 203 88 HOH HOH . FA 4 HOH C 4 204 80 HOH HOH . FA 4 HOH C 5 205 40 HOH HOH . FA 4 HOH C 6 206 84 HOH HOH . FA 4 HOH C 7 207 52 HOH HOH . FA 4 HOH C 8 208 29 HOH HOH . GA 4 HOH D 1 201 13 HOH HOH . GA 4 HOH D 2 202 59 HOH HOH . GA 4 HOH D 3 203 107 HOH HOH . GA 4 HOH D 4 204 45 HOH HOH . GA 4 HOH D 5 205 89 HOH HOH . GA 4 HOH D 6 206 106 HOH HOH . GA 4 HOH D 7 207 93 HOH HOH . GA 4 HOH D 8 208 53 HOH HOH . GA 4 HOH D 9 209 68 HOH HOH . GA 4 HOH D 10 210 44 HOH HOH . GA 4 HOH D 11 211 20 HOH HOH . GA 4 HOH D 12 212 1 HOH HOH . GA 4 HOH D 13 213 87 HOH HOH . GA 4 HOH D 14 214 63 HOH HOH . GA 4 HOH D 15 215 49 HOH HOH . GA 4 HOH D 16 216 69 HOH HOH . GA 4 HOH D 17 217 62 HOH HOH . GA 4 HOH D 18 218 22 HOH HOH . GA 4 HOH D 19 219 110 HOH HOH . GA 4 HOH D 20 220 5 HOH HOH . GA 4 HOH D 21 221 31 HOH HOH . HA 4 HOH E 1 201 60 HOH HOH . HA 4 HOH E 2 202 50 HOH HOH . HA 4 HOH E 3 203 3 HOH HOH . HA 4 HOH E 4 204 94 HOH HOH . HA 4 HOH E 5 205 75 HOH HOH . HA 4 HOH E 6 206 41 HOH HOH . HA 4 HOH E 7 207 23 HOH HOH . HA 4 HOH E 8 208 73 HOH HOH . HA 4 HOH E 9 209 111 HOH HOH . HA 4 HOH E 10 210 113 HOH HOH . IA 4 HOH F 1 201 14 HOH HOH . IA 4 HOH F 2 202 54 HOH HOH . IA 4 HOH F 3 203 51 HOH HOH . IA 4 HOH F 4 204 55 HOH HOH . IA 4 HOH F 5 205 85 HOH HOH . IA 4 HOH F 6 206 34 HOH HOH . IA 4 HOH F 7 207 67 HOH HOH . IA 4 HOH F 8 208 58 HOH HOH . IA 4 HOH F 9 209 2 HOH HOH . IA 4 HOH F 10 210 83 HOH HOH . IA 4 HOH F 11 211 79 HOH HOH . IA 4 HOH F 12 212 32 HOH HOH . IA 4 HOH F 13 213 72 HOH HOH . IA 4 HOH F 14 214 104 HOH HOH . IA 4 HOH F 15 215 65 HOH HOH . JA 4 HOH G 1 201 64 HOH HOH . JA 4 HOH G 2 202 78 HOH HOH . JA 4 HOH G 3 203 39 HOH HOH . JA 4 HOH G 4 204 17 HOH HOH . JA 4 HOH G 5 205 33 HOH HOH . JA 4 HOH G 6 206 4 HOH HOH . JA 4 HOH G 7 207 16 HOH HOH . KA 4 HOH H 1 201 97 HOH HOH . KA 4 HOH H 2 202 96 HOH HOH . KA 4 HOH H 3 203 74 HOH HOH . KA 4 HOH H 4 204 28 HOH HOH . KA 4 HOH H 5 205 46 HOH HOH . KA 4 HOH H 6 206 103 HOH HOH . KA 4 HOH H 7 207 109 HOH HOH . KA 4 HOH H 8 208 25 HOH HOH . KA 4 HOH H 9 209 76 HOH HOH . KA 4 HOH H 10 210 92 HOH HOH . LA 4 HOH I 1 201 71 HOH HOH . LA 4 HOH I 2 202 77 HOH HOH . LA 4 HOH I 3 203 15 HOH HOH . LA 4 HOH I 4 204 90 HOH HOH . LA 4 HOH I 5 205 42 HOH HOH . LA 4 HOH I 6 206 100 HOH HOH . LA 4 HOH I 7 207 108 HOH HOH . LA 4 HOH I 8 208 61 HOH HOH . LA 4 HOH I 9 209 26 HOH HOH . LA 4 HOH I 10 210 86 HOH HOH . LA 4 HOH I 11 211 18 HOH HOH . LA 4 HOH I 12 212 35 HOH HOH . LA 4 HOH I 13 213 112 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id T _atom_site.label_entity_id 3 _atom_site.Cartn_x -10.592 _atom_site.Cartn_y 17.607 _atom_site.Cartn_z -54.586 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 43.48 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 103 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 350 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #