data_6T9A
#
_model_server_result.job_id            k9Ark18QqjGEUp0HSmlO4A 
_model_server_result.datetime_utc      '2024-11-13 15:39:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6t9a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":103}' 
#
_entry.id    6T9A 
#
_exptl.entry_id    6T9A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         116.4 
_cell.angle_beta          94.54 
_cell.angle_gamma         115.49 
_cell.entry_id            6T9A 
_cell.length_a            40.262 
_cell.length_b            42.105 
_cell.length_c            44.02 
_cell.Z_PDB               3 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6T9A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 L N N 
? 4 O N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6T9A 
_atom_sites.fract_transf_matrix[1][1]    0.024837 
_atom_sites.fract_transf_matrix[1][2]    0.011842 
_atom_sites.fract_transf_matrix[1][3]    0.009774 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.026311 
_atom_sites.fract_transf_matrix[2][3]    0.016535 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026915 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 FUC A 1 101 910 FUC FUC . 
E 3 FUL A 1 102 911 FUL FUL . 
F 2 FUC A 1 103 920 FUC FUC . 
G 3 FUL A 1 104 921 FUL FUL . 
H 4 EDO A 1 105 990 EDO EDO . 
I 2 FUC B 1 101 910 FUC FUC . 
J 3 FUL B 1 102 911 FUL FUL . 
K 3 FUL B 1 103 920 FUL FUL . 
L 4 EDO B 1 104 990 EDO EDO . 
M 2 FUC C 1 101 910 FUC FUC . 
N 3 FUL C 1 102 911 FUL FUL . 
O 4 EDO C 1 103 990 EDO EDO . 
P 2 FUC C 1 104 920 FUC FUC . 
Q 3 FUL C 1 105 921 FUL FUL . 
R 5 HOH A 1 201 37 HOH HOH . 
R 5 HOH A 2 202 141 HOH HOH . 
R 5 HOH A 3 203 255 HOH HOH . 
R 5 HOH A 4 204 143 HOH HOH . 
R 5 HOH A 5 205 186 HOH HOH . 
R 5 HOH A 6 206 129 HOH HOH . 
R 5 HOH A 7 207 74 HOH HOH . 
R 5 HOH A 8 208 187 HOH HOH . 
R 5 HOH A 9 209 231 HOH HOH . 
R 5 HOH A 10 210 89 HOH HOH . 
R 5 HOH A 11 211 165 HOH HOH . 
R 5 HOH A 12 212 47 HOH HOH . 
R 5 HOH A 13 213 132 HOH HOH . 
R 5 HOH A 14 214 243 HOH HOH . 
R 5 HOH A 15 215 56 HOH HOH . 
R 5 HOH A 16 216 32 HOH HOH . 
R 5 HOH A 17 217 92 HOH HOH . 
R 5 HOH A 18 218 1 HOH HOH . 
R 5 HOH A 19 219 145 HOH HOH . 
R 5 HOH A 20 220 43 HOH HOH . 
R 5 HOH A 21 221 49 HOH HOH . 
R 5 HOH A 22 222 77 HOH HOH . 
R 5 HOH A 23 223 67 HOH HOH . 
R 5 HOH A 24 224 194 HOH HOH . 
R 5 HOH A 25 225 7 HOH HOH . 
R 5 HOH A 26 226 126 HOH HOH . 
R 5 HOH A 27 227 14 HOH HOH . 
R 5 HOH A 28 228 123 HOH HOH . 
R 5 HOH A 29 229 105 HOH HOH . 
R 5 HOH A 30 230 113 HOH HOH . 
R 5 HOH A 31 231 91 HOH HOH . 
R 5 HOH A 32 232 28 HOH HOH . 
R 5 HOH A 33 233 119 HOH HOH . 
R 5 HOH A 34 234 81 HOH HOH . 
R 5 HOH A 35 235 58 HOH HOH . 
R 5 HOH A 36 236 21 HOH HOH . 
R 5 HOH A 37 237 199 HOH HOH . 
R 5 HOH A 38 238 80 HOH HOH . 
R 5 HOH A 39 239 237 HOH HOH . 
R 5 HOH A 40 240 159 HOH HOH . 
R 5 HOH A 41 241 184 HOH HOH . 
R 5 HOH A 42 242 109 HOH HOH . 
R 5 HOH A 43 243 4 HOH HOH . 
R 5 HOH A 44 244 215 HOH HOH . 
R 5 HOH A 45 245 175 HOH HOH . 
R 5 HOH A 46 246 118 HOH HOH . 
R 5 HOH A 47 247 82 HOH HOH . 
R 5 HOH A 48 248 131 HOH HOH . 
R 5 HOH A 49 249 149 HOH HOH . 
R 5 HOH A 50 250 100 HOH HOH . 
R 5 HOH A 51 251 84 HOH HOH . 
R 5 HOH A 52 252 244 HOH HOH . 
R 5 HOH A 53 253 206 HOH HOH . 
R 5 HOH A 54 254 227 HOH HOH . 
R 5 HOH A 55 255 16 HOH HOH . 
R 5 HOH A 56 256 150 HOH HOH . 
R 5 HOH A 57 257 157 HOH HOH . 
R 5 HOH A 58 258 62 HOH HOH . 
R 5 HOH A 59 259 18 HOH HOH . 
R 5 HOH A 60 260 156 HOH HOH . 
R 5 HOH A 61 261 167 HOH HOH . 
R 5 HOH A 62 262 127 HOH HOH . 
R 5 HOH A 63 263 114 HOH HOH . 
R 5 HOH A 64 264 238 HOH HOH . 
R 5 HOH A 65 265 222 HOH HOH . 
R 5 HOH A 66 266 154 HOH HOH . 
R 5 HOH A 67 267 112 HOH HOH . 
R 5 HOH A 68 268 163 HOH HOH . 
R 5 HOH A 69 269 225 HOH HOH . 
R 5 HOH A 70 270 211 HOH HOH . 
R 5 HOH A 71 271 233 HOH HOH . 
R 5 HOH A 72 272 111 HOH HOH . 
R 5 HOH A 73 273 229 HOH HOH . 
R 5 HOH A 74 274 232 HOH HOH . 
R 5 HOH A 75 275 22 HOH HOH . 
R 5 HOH A 76 276 239 HOH HOH . 
R 5 HOH A 77 277 96 HOH HOH . 
R 5 HOH A 78 278 174 HOH HOH . 
R 5 HOH A 79 279 33 HOH HOH . 
R 5 HOH A 80 280 83 HOH HOH . 
R 5 HOH A 81 281 179 HOH HOH . 
R 5 HOH A 82 282 106 HOH HOH . 
R 5 HOH A 83 283 26 HOH HOH . 
R 5 HOH A 84 284 245 HOH HOH . 
R 5 HOH A 85 285 177 HOH HOH . 
R 5 HOH A 86 286 88 HOH HOH . 
S 5 HOH B 1 201 182 HOH HOH . 
S 5 HOH B 2 202 209 HOH HOH . 
S 5 HOH B 3 203 63 HOH HOH . 
S 5 HOH B 4 204 151 HOH HOH . 
S 5 HOH B 5 205 55 HOH HOH . 
S 5 HOH B 6 206 99 HOH HOH . 
S 5 HOH B 7 207 146 HOH HOH . 
S 5 HOH B 8 208 235 HOH HOH . 
S 5 HOH B 9 209 31 HOH HOH . 
S 5 HOH B 10 210 20 HOH HOH . 
S 5 HOH B 11 211 57 HOH HOH . 
S 5 HOH B 12 212 192 HOH HOH . 
S 5 HOH B 13 213 241 HOH HOH . 
S 5 HOH B 14 214 139 HOH HOH . 
S 5 HOH B 15 215 213 HOH HOH . 
S 5 HOH B 16 216 128 HOH HOH . 
S 5 HOH B 17 217 60 HOH HOH . 
S 5 HOH B 18 218 10 HOH HOH . 
S 5 HOH B 19 219 102 HOH HOH . 
S 5 HOH B 20 220 68 HOH HOH . 
S 5 HOH B 21 221 198 HOH HOH . 
S 5 HOH B 22 222 223 HOH HOH . 
S 5 HOH B 23 223 242 HOH HOH . 
S 5 HOH B 24 224 117 HOH HOH . 
S 5 HOH B 25 225 2 HOH HOH . 
S 5 HOH B 26 226 59 HOH HOH . 
S 5 HOH B 27 227 27 HOH HOH . 
S 5 HOH B 28 228 133 HOH HOH . 
S 5 HOH B 29 229 29 HOH HOH . 
S 5 HOH B 30 230 15 HOH HOH . 
S 5 HOH B 31 231 76 HOH HOH . 
S 5 HOH B 32 232 208 HOH HOH . 
S 5 HOH B 33 233 8 HOH HOH . 
S 5 HOH B 34 234 97 HOH HOH . 
S 5 HOH B 35 235 65 HOH HOH . 
S 5 HOH B 36 236 3 HOH HOH . 
S 5 HOH B 37 237 61 HOH HOH . 
S 5 HOH B 38 238 12 HOH HOH . 
S 5 HOH B 39 239 228 HOH HOH . 
S 5 HOH B 40 240 189 HOH HOH . 
S 5 HOH B 41 241 41 HOH HOH . 
S 5 HOH B 42 242 70 HOH HOH . 
S 5 HOH B 43 243 116 HOH HOH . 
S 5 HOH B 44 244 204 HOH HOH . 
S 5 HOH B 45 245 11 HOH HOH . 
S 5 HOH B 46 246 23 HOH HOH . 
S 5 HOH B 47 247 104 HOH HOH . 
S 5 HOH B 48 248 196 HOH HOH . 
S 5 HOH B 49 249 42 HOH HOH . 
S 5 HOH B 50 250 75 HOH HOH . 
S 5 HOH B 51 251 188 HOH HOH . 
S 5 HOH B 52 252 236 HOH HOH . 
S 5 HOH B 53 253 50 HOH HOH . 
S 5 HOH B 54 254 152 HOH HOH . 
S 5 HOH B 55 255 107 HOH HOH . 
S 5 HOH B 56 256 224 HOH HOH . 
S 5 HOH B 57 257 115 HOH HOH . 
S 5 HOH B 58 258 78 HOH HOH . 
S 5 HOH B 59 259 219 HOH HOH . 
S 5 HOH B 60 260 122 HOH HOH . 
S 5 HOH B 61 261 200 HOH HOH . 
S 5 HOH B 62 262 138 HOH HOH . 
S 5 HOH B 63 263 35 HOH HOH . 
S 5 HOH B 64 264 44 HOH HOH . 
S 5 HOH B 65 265 120 HOH HOH . 
S 5 HOH B 66 266 240 HOH HOH . 
S 5 HOH B 67 267 171 HOH HOH . 
S 5 HOH B 68 268 203 HOH HOH . 
S 5 HOH B 69 269 6 HOH HOH . 
S 5 HOH B 70 270 162 HOH HOH . 
S 5 HOH B 71 271 195 HOH HOH . 
S 5 HOH B 72 272 135 HOH HOH . 
S 5 HOH B 73 273 40 HOH HOH . 
S 5 HOH B 74 274 250 HOH HOH . 
S 5 HOH B 75 275 254 HOH HOH . 
S 5 HOH B 76 276 207 HOH HOH . 
S 5 HOH B 77 277 134 HOH HOH . 
S 5 HOH B 78 278 247 HOH HOH . 
S 5 HOH B 79 279 136 HOH HOH . 
S 5 HOH B 80 280 248 HOH HOH . 
S 5 HOH B 81 281 230 HOH HOH . 
S 5 HOH B 82 282 178 HOH HOH . 
S 5 HOH B 83 283 180 HOH HOH . 
S 5 HOH B 84 284 168 HOH HOH . 
S 5 HOH B 85 285 103 HOH HOH . 
S 5 HOH B 86 286 201 HOH HOH . 
S 5 HOH B 87 287 137 HOH HOH . 
S 5 HOH B 88 288 69 HOH HOH . 
T 5 HOH C 1 201 51 HOH HOH . 
T 5 HOH C 2 202 66 HOH HOH . 
T 5 HOH C 3 203 216 HOH HOH . 
T 5 HOH C 4 204 24 HOH HOH . 
T 5 HOH C 5 205 13 HOH HOH . 
T 5 HOH C 6 206 30 HOH HOH . 
T 5 HOH C 7 207 36 HOH HOH . 
T 5 HOH C 8 208 124 HOH HOH . 
T 5 HOH C 9 209 87 HOH HOH . 
T 5 HOH C 10 210 142 HOH HOH . 
T 5 HOH C 11 211 144 HOH HOH . 
T 5 HOH C 12 212 53 HOH HOH . 
T 5 HOH C 13 213 17 HOH HOH . 
T 5 HOH C 14 214 79 HOH HOH . 
T 5 HOH C 15 215 110 HOH HOH . 
T 5 HOH C 16 216 19 HOH HOH . 
T 5 HOH C 17 217 197 HOH HOH . 
T 5 HOH C 18 218 148 HOH HOH . 
T 5 HOH C 19 219 93 HOH HOH . 
T 5 HOH C 20 220 202 HOH HOH . 
T 5 HOH C 21 221 160 HOH HOH . 
T 5 HOH C 22 222 121 HOH HOH . 
T 5 HOH C 23 223 185 HOH HOH . 
T 5 HOH C 24 224 85 HOH HOH . 
T 5 HOH C 25 225 46 HOH HOH . 
T 5 HOH C 26 226 210 HOH HOH . 
T 5 HOH C 27 227 25 HOH HOH . 
T 5 HOH C 28 228 5 HOH HOH . 
T 5 HOH C 29 229 193 HOH HOH . 
T 5 HOH C 30 230 98 HOH HOH . 
T 5 HOH C 31 231 218 HOH HOH . 
T 5 HOH C 32 232 108 HOH HOH . 
T 5 HOH C 33 233 125 HOH HOH . 
T 5 HOH C 34 234 158 HOH HOH . 
T 5 HOH C 35 235 54 HOH HOH . 
T 5 HOH C 36 236 191 HOH HOH . 
T 5 HOH C 37 237 38 HOH HOH . 
T 5 HOH C 38 238 34 HOH HOH . 
T 5 HOH C 39 239 161 HOH HOH . 
T 5 HOH C 40 240 217 HOH HOH . 
T 5 HOH C 41 241 130 HOH HOH . 
T 5 HOH C 42 242 90 HOH HOH . 
T 5 HOH C 43 243 101 HOH HOH . 
T 5 HOH C 44 244 86 HOH HOH . 
T 5 HOH C 45 245 95 HOH HOH . 
T 5 HOH C 46 246 220 HOH HOH . 
T 5 HOH C 47 247 72 HOH HOH . 
T 5 HOH C 48 248 64 HOH HOH . 
T 5 HOH C 49 249 164 HOH HOH . 
T 5 HOH C 50 250 226 HOH HOH . 
T 5 HOH C 51 251 39 HOH HOH . 
T 5 HOH C 52 252 155 HOH HOH . 
T 5 HOH C 53 253 190 HOH HOH . 
T 5 HOH C 54 254 153 HOH HOH . 
T 5 HOH C 55 255 147 HOH HOH . 
T 5 HOH C 56 256 94 HOH HOH . 
T 5 HOH C 57 257 169 HOH HOH . 
T 5 HOH C 58 258 73 HOH HOH . 
T 5 HOH C 59 259 166 HOH HOH . 
T 5 HOH C 60 260 212 HOH HOH . 
T 5 HOH C 61 261 9 HOH HOH . 
T 5 HOH C 62 262 52 HOH HOH . 
T 5 HOH C 63 263 234 HOH HOH . 
T 5 HOH C 64 264 214 HOH HOH . 
T 5 HOH C 65 265 45 HOH HOH . 
T 5 HOH C 66 266 249 HOH HOH . 
T 5 HOH C 67 267 251 HOH HOH . 
T 5 HOH C 68 268 176 HOH HOH . 
T 5 HOH C 69 269 170 HOH HOH . 
T 5 HOH C 70 270 221 HOH HOH . 
T 5 HOH C 71 271 205 HOH HOH . 
T 5 HOH C 72 272 246 HOH HOH . 
T 5 HOH C 73 273 253 HOH HOH . 
T 5 HOH C 74 274 71 HOH HOH . 
T 5 HOH C 75 275 172 HOH HOH . 
T 5 HOH C 76 276 252 HOH HOH . 
T 5 HOH C 77 277 181 HOH HOH . 
T 5 HOH C 78 278 183 HOH HOH . 
T 5 HOH C 79 279 173 HOH HOH . 
T 5 HOH C 80 280 48 HOH HOH . 
T 5 HOH C 81 281 140 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . O 4 -10.522 -11.829 -23.025 1 29.62 ? C1 EDO 103 C 1 
HETATM 2 O O1 EDO . . . O 4 -11.242 -10.646 -23.16 1 33.18 ? O1 EDO 103 C 1 
HETATM 3 C C2 EDO . . . O 4 -10.161 -12.111 -21.633 1 29.94 ? C2 EDO 103 C 1 
HETATM 4 O O2 EDO . . . O 4 -9.099 -13.023 -21.537 1 29.62 ? O2 EDO 103 C 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#