data_6TA4
#
_model_server_result.job_id            ylgrpn68r3c7wEggmPduiQ 
_model_server_result.datetime_utc      '2024-12-24 17:53:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ta4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":501}' 
#
_entry.id    6TA4 
#
_exptl.entry_id    6TA4 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              523.18 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLN 11 B GLN 11 1_555 E MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.9 ? 
metalc ? metalc2 D O1B G2P . B G2P 501 1_555 E MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.956 ? 
metalc ? metalc3 B OE1 GLN 11 A GLN 11 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? 
metalc ? metalc4 B OE2 GLU 71 A GLU 71 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.811 ? 
metalc ? metalc5 F O1G GTP . A GTP 501 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? 
metalc ? metalc6 F O3B GTP . A GTP 501 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? 
metalc ? metalc7 F O2B GTP . A GTP 501 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.858 ? 
metalc ? metalc8 F O3A GTP . A GTP 501 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.957 ? 
metalc ? metalc9 C N SER 255 K SER 233 1_555 I MG MG . K MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? 
metalc ? metalc10 C OD1 ASP 287 K ASP 265 1_555 I MG MG . K MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? 
metalc ? metalc11 H O3G ANP . K ANP 601 1_555 I MG MG . K MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? 
metalc ? metalc12 H O2B ANP . K ANP 601 1_555 I MG MG . K MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? 
#
_chem_comp.formula           'C10 H16 N5 O14 P3' 
_chem_comp.formula_weight    523.18 
_chem_comp.id                GTP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GTP doub 231 n n 
PG O2G GTP sing 232 n n 
PG O3G GTP sing 233 n n 
PG O3B GTP sing 234 n n 
O2G HOG2 GTP sing 235 n n 
O3G HOG3 GTP sing 236 n n 
O3B PB GTP sing 237 n n 
PB O1B GTP doub 238 n n 
PB O2B GTP sing 239 n n 
PB O3A GTP sing 240 n n 
O2B HOB2 GTP sing 241 n n 
O3A PA GTP sing 242 n n 
PA O1A GTP doub 243 n n 
PA O2A GTP sing 244 n n 
PA O5' GTP sing 245 n n 
O2A HOA2 GTP sing 246 n n 
O5' C5' GTP sing 247 n n 
C5' C4' GTP sing 248 n n 
C5' H5' GTP sing 249 n n 
C5' "H5''" GTP sing 250 n n 
C4' O4' GTP sing 251 n n 
C4' C3' GTP sing 252 n n 
C4' H4' GTP sing 253 n n 
O4' C1' GTP sing 254 n n 
C3' O3' GTP sing 255 n n 
C3' C2' GTP sing 256 n n 
C3' H3' GTP sing 257 n n 
O3' HO3' GTP sing 258 n n 
C2' O2' GTP sing 259 n n 
C2' C1' GTP sing 260 n n 
C2' H2' GTP sing 261 n n 
O2' HO2' GTP sing 262 n n 
C1' N9 GTP sing 263 n n 
C1' H1' GTP sing 264 n n 
N9 C8 GTP sing 265 n y 
N9 C4 GTP sing 266 n y 
C8 N7 GTP doub 267 n y 
C8 H8 GTP sing 268 n n 
N7 C5 GTP sing 269 n y 
C5 C6 GTP sing 270 n n 
C5 C4 GTP doub 271 n y 
C6 O6 GTP doub 272 n n 
C6 N1 GTP sing 273 n n 
N1 C2 GTP sing 274 n n 
N1 HN1 GTP sing 275 n n 
C2 N2 GTP sing 276 n n 
C2 N3 GTP doub 277 n n 
N2 HN21 GTP sing 278 n n 
N2 HN22 GTP sing 279 n n 
N3 C4 GTP sing 280 n n 
#
_atom_sites.entry_id                     6TA4 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 G2P B 1 501 501 G2P G2P . 
E 5 MG B 1 502 502 MG MG . 
F 6 GTP A 1 501 501 GTP GTP . 
G 5 MG A 1 502 502 MG MG . 
H 7 ANP K 1 601 601 ANP ANP . 
I 5 MG K 1 602 501 MG MG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GTP . . . F 6 156.256 272.645 279.46 1 157.12 ? PG GTP 501 A 1 
HETATM 2 O O1G GTP . . . F 6 157.606 272.033 279.483 1 157.12 ? O1G GTP 501 A 1 
HETATM 3 O O2G GTP . . . F 6 156.199 274.014 280.118 1 157.12 ? O2G GTP 501 A 1 
HETATM 4 O O3G GTP . . . F 6 155.182 271.76 280.067 1 157.12 ? O3G GTP 501 A 1 
HETATM 5 O O3B GTP . . . F 6 155.824 272.875 277.947 1 157.12 ? O3B GTP 501 A 1 
HETATM 6 P PB GTP . . . F 6 156.687 272.639 276.635 1 157.12 ? PB GTP 501 A 1 
HETATM 7 O O1B GTP . . . F 6 155.792 272.855 275.424 1 157.12 ? O1B GTP 501 A 1 
HETATM 8 O O2B GTP . . . F 6 157.835 273.565 276.613 1 157.12 ? O2B GTP 501 A 1 
HETATM 9 O O3A GTP . . . F 6 157.177 271.127 276.682 1 157.12 ? O3A GTP 501 A 1 
HETATM 10 P PA GTP . . . F 6 157.815 270.179 275.573 1 157.12 ? PA GTP 501 A 1 
HETATM 11 O O1A GTP . . . F 6 158.049 271.032 274.341 1 157.12 ? O1A GTP 501 A 1 
HETATM 12 O O2A GTP . . . F 6 159.103 269.648 276.065 1 157.12 ? O2A GTP 501 A 1 
HETATM 13 O O5' GTP . . . F 6 156.8 269.021 275.163 1 157.12 ? O5' GTP 501 A 1 
HETATM 14 C C5' GTP . . . F 6 156.886 267.663 275.646 1 157.12 ? C5' GTP 501 A 1 
HETATM 15 C C4' GTP . . . F 6 156.623 266.707 274.51 1 157.12 ? C4' GTP 501 A 1 
HETATM 16 O O4' GTP . . . F 6 157.741 266.72 273.594 1 157.12 ? O4' GTP 501 A 1 
HETATM 17 C C3' GTP . . . F 6 156.426 265.247 274.927 1 157.12 ? C3' GTP 501 A 1 
HETATM 18 O O3' GTP . . . F 6 155.386 264.639 274.174 1 157.12 ? O3' GTP 501 A 1 
HETATM 19 C C2' GTP . . . F 6 157.787 264.619 274.619 1 157.12 ? C2' GTP 501 A 1 
HETATM 20 O O2' GTP . . . F 6 157.667 263.238 274.313 1 157.12 ? O2' GTP 501 A 1 
HETATM 21 C C1' GTP . . . F 6 158.189 265.399 273.377 1 157.12 ? C1' GTP 501 A 1 
HETATM 22 N N9 GTP . . . F 6 159.638 265.43 273.155 1 157.12 ? N9 GTP 501 A 1 
HETATM 23 C C8 GTP . . . F 6 160.617 265.37 274.103 1 157.12 ? C8 GTP 501 A 1 
HETATM 24 N N7 GTP . . . F 6 161.827 265.414 273.601 1 157.12 ? N7 GTP 501 A 1 
HETATM 25 C C5 GTP . . . F 6 161.623 265.512 272.235 1 157.12 ? C5 GTP 501 A 1 
HETATM 26 C C6 GTP . . . F 6 162.547 265.598 271.155 1 157.12 ? C6 GTP 501 A 1 
HETATM 27 O O6 GTP . . . F 6 163.773 265.621 271.227 1 157.12 ? O6 GTP 501 A 1 
HETATM 28 N N1 GTP . . . F 6 161.917 265.673 269.932 1 157.12 ? N1 GTP 501 A 1 
HETATM 29 C C2 GTP . . . F 6 160.565 265.672 269.747 1 157.12 ? C2 GTP 501 A 1 
HETATM 30 N N2 GTP . . . F 6 160.127 265.75 268.488 1 157.12 ? N2 GTP 501 A 1 
HETATM 31 N N3 GTP . . . F 6 159.692 265.596 270.745 1 157.12 ? N3 GTP 501 A 1 
HETATM 32 C C4 GTP . . . F 6 160.28 265.52 271.949 1 157.12 ? C4 GTP 501 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           374 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           32 
#