data_6TB5 # _model_server_result.job_id A7EaTwd3wvx_2pgLAe5DuQ _model_server_result.datetime_utc '2024-10-20 00:50:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tb5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 6TB5 # _exptl.entry_id 6TB5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TB5 _cell.length_a 88.83 _cell.length_b 88.83 _cell.length_c 88.83 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TB5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 195 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_454 -x-1,y,-z-1 -1 0 0 0 1 0 0 0 -1 -88.83 0 -88.83 3 'crystal symmetry operation' 6_544 z,-x-1,-y-1 0 0 1 -1 0 0 0 -1 0 0 -88.83 -88.83 4 'crystal symmetry operation' 8_454 -z-1,x,-y-1 0 0 -1 1 0 0 0 -1 0 -88.83 0 -88.83 5 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 11_544 y,-z-1,-x-1 0 1 0 0 0 -1 -1 0 0 0 -88.83 -88.83 7 'crystal symmetry operation' 10_454 -y-1,z,-x-1 0 -1 0 0 0 1 -1 0 0 -88.83 0 -88.83 8 'crystal symmetry operation' 12_445 -y-1,-z-1,x 0 -1 0 0 0 -1 1 0 0 -88.83 -88.83 0 9 'crystal symmetry operation' 7_445 -z-1,-x-1,y 0 0 -1 -1 0 0 0 1 0 -88.83 -88.83 0 10 'crystal symmetry operation' 2_445 -x-1,-y-1,z -1 0 0 0 -1 0 0 0 1 -88.83 -88.83 0 11 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 12 'crystal symmetry operation' 4_544 x,-y-1,-z-1 1 0 0 0 -1 0 0 0 -1 0 -88.83 -88.83 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 70 A HIS 70 1_555 D FE FE . A FE 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc2 A OD1 ASP 97 A ASP 97 1_555 D FE FE . A FE 303 3_454 ? A ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc3 A OD2 ASP 97 A ASP 97 1_555 D FE FE . A FE 303 3_454 ? A ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc4 A OE2 GLU 101 A GLU 101 1_555 D FE FE . A FE 303 3_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc5 A OD1 ASP 132 A ASP 132 1_555 B CA CA . A CA 301 8_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc6 A OD2 ASP 132 A ASP 132 1_555 B CA CA . A CA 301 8_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? metalc ? metalc7 A OD1 ASP 133 A ASP 133 1_555 B CA CA . A CA 301 8_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? metalc ? metalc8 A OD1 ASN 167 A ASN 167 1_555 F FE FE . A FE 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? metalc ? metalc9 A OD1 ASN 167 A ASN 167 1_555 F FE FE . A FE 305 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? metalc ? metalc10 A OE1 GLN 170 A GLN 170 1_555 G FE FE . A FE 306 9_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc11 A OE1 GLU 171 A GLU 171 1_555 E FE FE . A FE 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.77 ? metalc ? metalc12 A OE1 GLU 171 A GLU 171 1_555 E FE FE . A FE 304 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.77 ? metalc ? metalc13 A O LEU 187 A LEU 187 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc14 A OD1 ASN 189 A ASN 189 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc15 A OD2 ASP 193 A ASP 193 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc16 A O PRO 194 A PRO 194 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc17 A O ASN 195 A ASN 195 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.869 ? metalc ? metalc18 A O ILE 200 A ILE 200 1_555 B CA CA . A CA 301 8_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc19 B CA CA . A CA 301 1_555 H O HOH . A HOH 445 11_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc20 C CA CA . A CA 302 1_555 H O HOH . A HOH 460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc21 C CA CA . A CA 302 1_555 H O HOH . A HOH 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? metalc ? metalc22 C CA CA . A CA 302 1_555 H O HOH . A HOH 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.812 ? metalc ? metalc23 D FE FE . A FE 303 1_555 H O HOH . A HOH 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc24 D FE FE . A FE 303 1_555 H O HOH . A HOH 507 3_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc25 G FE FE . A FE 306 1_555 H O HOH . A HOH 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6TB5 _atom_sites.fract_transf_matrix[1][1] 0.011257 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011257 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011257 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 301 1 CA CA . C 2 CA A 1 302 2 CA CA . D 3 FE A 1 303 1 FE FE . E 3 FE A 1 304 4 FE FE . F 3 FE A 1 305 6 FE FE . G 3 FE A 1 306 7 FE FE . H 4 HOH A 1 401 218 HOH HOH . H 4 HOH A 2 402 132 HOH HOH . H 4 HOH A 3 403 72 HOH HOH . H 4 HOH A 4 404 150 HOH HOH . H 4 HOH A 5 405 157 HOH HOH . H 4 HOH A 6 406 9 HOH HOH . H 4 HOH A 7 407 46 HOH HOH . H 4 HOH A 8 408 154 HOH HOH . H 4 HOH A 9 409 225 HOH HOH . H 4 HOH A 10 410 133 HOH HOH . H 4 HOH A 11 411 191 HOH HOH . H 4 HOH A 12 412 134 HOH HOH . H 4 HOH A 13 413 47 HOH HOH . H 4 HOH A 14 414 49 HOH HOH . H 4 HOH A 15 415 60 HOH HOH . H 4 HOH A 16 416 194 HOH HOH . H 4 HOH A 17 417 160 HOH HOH . H 4 HOH A 18 418 68 HOH HOH . H 4 HOH A 19 419 237 HOH HOH . H 4 HOH A 20 420 118 HOH HOH . H 4 HOH A 21 421 28 HOH HOH . H 4 HOH A 22 422 57 HOH HOH . H 4 HOH A 23 423 156 HOH HOH . H 4 HOH A 24 424 10 HOH HOH . H 4 HOH A 25 425 18 HOH HOH . H 4 HOH A 26 426 15 HOH HOH . H 4 HOH A 27 427 3 HOH HOH . H 4 HOH A 28 428 230 HOH HOH . H 4 HOH A 29 429 20 HOH HOH . H 4 HOH A 30 430 1 HOH HOH . H 4 HOH A 31 431 67 HOH HOH . H 4 HOH A 32 432 55 HOH HOH . H 4 HOH A 33 433 148 HOH HOH . H 4 HOH A 34 434 158 HOH HOH . H 4 HOH A 35 435 206 HOH HOH . H 4 HOH A 36 436 8 HOH HOH . H 4 HOH A 37 437 174 HOH HOH . H 4 HOH A 38 438 198 HOH HOH . H 4 HOH A 39 439 33 HOH HOH . H 4 HOH A 40 440 83 HOH HOH . H 4 HOH A 41 441 42 HOH HOH . H 4 HOH A 42 442 77 HOH HOH . H 4 HOH A 43 443 80 HOH HOH . H 4 HOH A 44 444 64 HOH HOH . H 4 HOH A 45 445 2 HOH HOH . H 4 HOH A 46 446 66 HOH HOH . H 4 HOH A 47 447 13 HOH HOH . H 4 HOH A 48 448 16 HOH HOH . H 4 HOH A 49 449 209 HOH HOH . H 4 HOH A 50 450 36 HOH HOH . H 4 HOH A 51 451 167 HOH HOH . H 4 HOH A 52 452 224 HOH HOH . H 4 HOH A 53 453 37 HOH HOH . H 4 HOH A 54 454 113 HOH HOH . H 4 HOH A 55 455 193 HOH HOH . H 4 HOH A 56 456 169 HOH HOH . H 4 HOH A 57 457 175 HOH HOH . H 4 HOH A 58 458 41 HOH HOH . H 4 HOH A 59 459 29 HOH HOH . H 4 HOH A 60 460 210 HOH HOH . H 4 HOH A 61 461 11 HOH HOH . H 4 HOH A 62 462 71 HOH HOH . H 4 HOH A 63 463 176 HOH HOH . H 4 HOH A 64 464 186 HOH HOH . H 4 HOH A 65 465 27 HOH HOH . H 4 HOH A 66 466 214 HOH HOH . H 4 HOH A 67 467 26 HOH HOH . H 4 HOH A 68 468 24 HOH HOH . H 4 HOH A 69 469 17 HOH HOH . H 4 HOH A 70 470 6 HOH HOH . H 4 HOH A 71 471 22 HOH HOH . H 4 HOH A 72 472 85 HOH HOH . H 4 HOH A 73 473 110 HOH HOH . H 4 HOH A 74 474 43 HOH HOH . H 4 HOH A 75 475 183 HOH HOH . H 4 HOH A 76 476 7 HOH HOH . H 4 HOH A 77 477 52 HOH HOH . H 4 HOH A 78 478 215 HOH HOH . H 4 HOH A 79 479 30 HOH HOH . H 4 HOH A 80 480 25 HOH HOH . H 4 HOH A 81 481 14 HOH HOH . H 4 HOH A 82 482 163 HOH HOH . H 4 HOH A 83 483 196 HOH HOH . H 4 HOH A 84 484 31 HOH HOH . H 4 HOH A 85 485 61 HOH HOH . H 4 HOH A 86 486 203 HOH HOH . H 4 HOH A 87 487 190 HOH HOH . H 4 HOH A 88 488 5 HOH HOH . H 4 HOH A 89 489 135 HOH HOH . H 4 HOH A 90 490 217 HOH HOH . H 4 HOH A 91 491 48 HOH HOH . H 4 HOH A 92 492 171 HOH HOH . H 4 HOH A 93 493 63 HOH HOH . H 4 HOH A 94 494 149 HOH HOH . H 4 HOH A 95 495 62 HOH HOH . H 4 HOH A 96 496 74 HOH HOH . H 4 HOH A 97 497 58 HOH HOH . H 4 HOH A 98 498 127 HOH HOH . H 4 HOH A 99 499 179 HOH HOH . H 4 HOH A 100 500 23 HOH HOH . H 4 HOH A 101 501 195 HOH HOH . H 4 HOH A 102 502 155 HOH HOH . H 4 HOH A 103 503 211 HOH HOH . H 4 HOH A 104 504 159 HOH HOH . H 4 HOH A 105 505 137 HOH HOH . H 4 HOH A 106 506 142 HOH HOH . H 4 HOH A 107 507 19 HOH HOH . H 4 HOH A 108 508 4 HOH HOH . H 4 HOH A 109 509 228 HOH HOH . H 4 HOH A 110 510 143 HOH HOH . H 4 HOH A 111 511 221 HOH HOH . H 4 HOH A 112 512 201 HOH HOH . H 4 HOH A 113 513 197 HOH HOH . H 4 HOH A 114 514 76 HOH HOH . H 4 HOH A 115 515 151 HOH HOH . H 4 HOH A 116 516 219 HOH HOH . H 4 HOH A 117 517 236 HOH HOH . H 4 HOH A 118 518 70 HOH HOH . H 4 HOH A 119 519 177 HOH HOH . H 4 HOH A 120 520 200 HOH HOH . H 4 HOH A 121 521 144 HOH HOH . H 4 HOH A 122 522 65 HOH HOH . H 4 HOH A 123 523 139 HOH HOH . H 4 HOH A 124 524 234 HOH HOH . H 4 HOH A 125 525 238 HOH HOH . H 4 HOH A 126 526 185 HOH HOH . H 4 HOH A 127 527 227 HOH HOH . H 4 HOH A 128 528 129 HOH HOH . H 4 HOH A 129 529 184 HOH HOH . H 4 HOH A 130 530 152 HOH HOH . H 4 HOH A 131 531 59 HOH HOH . H 4 HOH A 132 532 131 HOH HOH . H 4 HOH A 133 533 180 HOH HOH . H 4 HOH A 134 534 220 HOH HOH . H 4 HOH A 135 535 170 HOH HOH . H 4 HOH A 136 536 128 HOH HOH . H 4 HOH A 137 537 165 HOH HOH . H 4 HOH A 138 538 202 HOH HOH . H 4 HOH A 139 539 232 HOH HOH . H 4 HOH A 140 540 164 HOH HOH . H 4 HOH A 141 541 226 HOH HOH . H 4 HOH A 142 542 168 HOH HOH . H 4 HOH A 143 543 141 HOH HOH . H 4 HOH A 144 544 192 HOH HOH . H 4 HOH A 145 545 53 HOH HOH . H 4 HOH A 146 546 88 HOH HOH . H 4 HOH A 147 547 99 HOH HOH . H 4 HOH A 148 548 130 HOH HOH . H 4 HOH A 149 549 233 HOH HOH . H 4 HOH A 150 550 35 HOH HOH . H 4 HOH A 151 551 239 HOH HOH . H 4 HOH A 152 552 223 HOH HOH . H 4 HOH A 153 553 145 HOH HOH . H 4 HOH A 154 554 212 HOH HOH . H 4 HOH A 155 555 136 HOH HOH . H 4 HOH A 156 556 166 HOH HOH . H 4 HOH A 157 557 231 HOH HOH . H 4 HOH A 158 558 178 HOH HOH . H 4 HOH A 159 559 207 HOH HOH . H 4 HOH A 160 560 138 HOH HOH . H 4 HOH A 161 561 235 HOH HOH . H 4 HOH A 162 562 208 HOH HOH . H 4 HOH A 163 563 199 HOH HOH . H 4 HOH A 164 564 146 HOH HOH . H 4 HOH A 165 565 204 HOH HOH . H 4 HOH A 166 566 229 HOH HOH . H 4 HOH A 167 567 181 HOH HOH . H 4 HOH A 168 568 213 HOH HOH . H 4 HOH A 169 569 140 HOH HOH . H 4 HOH A 170 570 216 HOH HOH . H 4 HOH A 171 571 222 HOH HOH . H 4 HOH A 172 572 188 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -42.629 _atom_site.Cartn_y -23.304 _atom_site.Cartn_z -55.087 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 33.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 303 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #