data_6TBO # _model_server_result.job_id dew5G1Kt8XWrF60UZsj0-A _model_server_result.datetime_utc '2024-11-24 22:03:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tbo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 6TBO # _exptl.entry_id 6TBO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.45 _cell.angle_gamma 90 _cell.entry_id 6TBO _cell.length_a 62.74 _cell.length_b 89.46 _cell.length_c 61.15 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TBO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 G N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 6TBO _atom_sites.fract_transf_matrix[1][1] 0.015939 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002084 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011178 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016492 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DMS A 1 201 3 DMS DMS . D 3 DMS A 1 202 5 DMS DMS . E 4 N0E B 1 201 1 N0E LIG . F 5 PO4 B 1 202 2 PO4 PO4 . G 3 DMS B 1 203 4 DMS DMS . H 6 HOH A 1 301 83 HOH HOH . H 6 HOH A 2 302 19 HOH HOH . H 6 HOH A 3 303 102 HOH HOH . H 6 HOH A 4 304 29 HOH HOH . H 6 HOH A 5 305 76 HOH HOH . H 6 HOH A 6 306 103 HOH HOH . H 6 HOH A 7 307 141 HOH HOH . H 6 HOH A 8 308 92 HOH HOH . H 6 HOH A 9 309 45 HOH HOH . H 6 HOH A 10 310 52 HOH HOH . H 6 HOH A 11 311 35 HOH HOH . H 6 HOH A 12 312 157 HOH HOH . H 6 HOH A 13 313 56 HOH HOH . H 6 HOH A 14 314 155 HOH HOH . H 6 HOH A 15 315 79 HOH HOH . H 6 HOH A 16 316 78 HOH HOH . H 6 HOH A 17 317 166 HOH HOH . H 6 HOH A 18 318 75 HOH HOH . H 6 HOH A 19 319 121 HOH HOH . H 6 HOH A 20 320 164 HOH HOH . H 6 HOH A 21 321 74 HOH HOH . H 6 HOH A 22 322 80 HOH HOH . H 6 HOH A 23 323 64 HOH HOH . H 6 HOH A 24 324 162 HOH HOH . H 6 HOH A 25 325 133 HOH HOH . H 6 HOH A 26 326 6 HOH HOH . H 6 HOH A 27 327 187 HOH HOH . H 6 HOH A 28 328 63 HOH HOH . H 6 HOH A 29 329 140 HOH HOH . H 6 HOH A 30 330 47 HOH HOH . H 6 HOH A 31 331 95 HOH HOH . H 6 HOH A 32 332 131 HOH HOH . H 6 HOH A 33 333 126 HOH HOH . H 6 HOH A 34 334 34 HOH HOH . H 6 HOH A 35 335 161 HOH HOH . H 6 HOH A 36 336 90 HOH HOH . H 6 HOH A 37 337 120 HOH HOH . H 6 HOH A 38 338 114 HOH HOH . H 6 HOH A 39 339 111 HOH HOH . H 6 HOH A 40 340 128 HOH HOH . H 6 HOH A 41 341 37 HOH HOH . H 6 HOH A 42 342 119 HOH HOH . H 6 HOH A 43 343 7 HOH HOH . H 6 HOH A 44 344 136 HOH HOH . H 6 HOH A 45 345 87 HOH HOH . H 6 HOH A 46 346 106 HOH HOH . H 6 HOH A 47 347 91 HOH HOH . H 6 HOH A 48 348 108 HOH HOH . H 6 HOH A 49 349 197 HOH HOH . H 6 HOH A 50 350 145 HOH HOH . H 6 HOH A 51 351 8 HOH HOH . H 6 HOH A 52 352 142 HOH HOH . H 6 HOH A 53 353 138 HOH HOH . H 6 HOH A 54 354 61 HOH HOH . H 6 HOH A 55 355 135 HOH HOH . H 6 HOH A 56 356 33 HOH HOH . H 6 HOH A 57 357 124 HOH HOH . H 6 HOH A 58 358 169 HOH HOH . H 6 HOH A 59 359 73 HOH HOH . H 6 HOH A 60 360 1 HOH HOH . H 6 HOH A 61 361 5 HOH HOH . H 6 HOH A 62 362 39 HOH HOH . H 6 HOH A 63 363 100 HOH HOH . H 6 HOH A 64 364 68 HOH HOH . H 6 HOH A 65 365 20 HOH HOH . H 6 HOH A 66 366 4 HOH HOH . H 6 HOH A 67 367 67 HOH HOH . H 6 HOH A 68 368 211 HOH HOH . H 6 HOH A 69 369 24 HOH HOH . H 6 HOH A 70 370 93 HOH HOH . H 6 HOH A 71 371 21 HOH HOH . H 6 HOH A 72 372 9 HOH HOH . H 6 HOH A 73 373 104 HOH HOH . H 6 HOH A 74 374 160 HOH HOH . H 6 HOH A 75 375 154 HOH HOH . H 6 HOH A 76 376 146 HOH HOH . H 6 HOH A 77 377 158 HOH HOH . H 6 HOH A 78 378 143 HOH HOH . H 6 HOH A 79 379 28 HOH HOH . H 6 HOH A 80 380 193 HOH HOH . H 6 HOH A 81 381 12 HOH HOH . H 6 HOH A 82 382 25 HOH HOH . H 6 HOH A 83 383 209 HOH HOH . H 6 HOH A 84 384 112 HOH HOH . H 6 HOH A 85 385 192 HOH HOH . H 6 HOH A 86 386 168 HOH HOH . H 6 HOH A 87 387 144 HOH HOH . H 6 HOH A 88 388 194 HOH HOH . H 6 HOH A 89 389 23 HOH HOH . H 6 HOH A 90 390 86 HOH HOH . H 6 HOH A 91 391 196 HOH HOH . H 6 HOH A 92 392 189 HOH HOH . H 6 HOH A 93 393 30 HOH HOH . H 6 HOH A 94 394 188 HOH HOH . H 6 HOH A 95 395 163 HOH HOH . H 6 HOH A 96 396 18 HOH HOH . H 6 HOH A 97 397 195 HOH HOH . H 6 HOH A 98 398 170 HOH HOH . H 6 HOH A 99 399 186 HOH HOH . H 6 HOH A 100 400 198 HOH HOH . H 6 HOH A 101 401 212 HOH HOH . I 6 HOH B 1 301 134 HOH HOH . I 6 HOH B 2 302 204 HOH HOH . I 6 HOH B 3 303 22 HOH HOH . I 6 HOH B 4 304 82 HOH HOH . I 6 HOH B 5 305 72 HOH HOH . I 6 HOH B 6 306 156 HOH HOH . I 6 HOH B 7 307 98 HOH HOH . I 6 HOH B 8 308 130 HOH HOH . I 6 HOH B 9 309 51 HOH HOH . I 6 HOH B 10 310 58 HOH HOH . I 6 HOH B 11 311 36 HOH HOH . I 6 HOH B 12 312 99 HOH HOH . I 6 HOH B 13 313 101 HOH HOH . I 6 HOH B 14 314 110 HOH HOH . I 6 HOH B 15 315 46 HOH HOH . I 6 HOH B 16 316 116 HOH HOH . I 6 HOH B 17 317 94 HOH HOH . I 6 HOH B 18 318 137 HOH HOH . I 6 HOH B 19 319 32 HOH HOH . I 6 HOH B 20 320 57 HOH HOH . I 6 HOH B 21 321 153 HOH HOH . I 6 HOH B 22 322 123 HOH HOH . I 6 HOH B 23 323 152 HOH HOH . I 6 HOH B 24 324 2 HOH HOH . I 6 HOH B 25 325 107 HOH HOH . I 6 HOH B 26 326 81 HOH HOH . I 6 HOH B 27 327 77 HOH HOH . I 6 HOH B 28 328 88 HOH HOH . I 6 HOH B 29 329 180 HOH HOH . I 6 HOH B 30 330 11 HOH HOH . I 6 HOH B 31 331 15 HOH HOH . I 6 HOH B 32 332 60 HOH HOH . I 6 HOH B 33 333 132 HOH HOH . I 6 HOH B 34 334 176 HOH HOH . I 6 HOH B 35 335 69 HOH HOH . I 6 HOH B 36 336 199 HOH HOH . I 6 HOH B 37 337 173 HOH HOH . I 6 HOH B 38 338 53 HOH HOH . I 6 HOH B 39 339 97 HOH HOH . I 6 HOH B 40 340 41 HOH HOH . I 6 HOH B 41 341 38 HOH HOH . I 6 HOH B 42 342 201 HOH HOH . I 6 HOH B 43 343 85 HOH HOH . I 6 HOH B 44 344 118 HOH HOH . I 6 HOH B 45 345 43 HOH HOH . I 6 HOH B 46 346 40 HOH HOH . I 6 HOH B 47 347 3 HOH HOH . I 6 HOH B 48 348 117 HOH HOH . I 6 HOH B 49 349 59 HOH HOH . I 6 HOH B 50 350 191 HOH HOH . I 6 HOH B 51 351 181 HOH HOH . I 6 HOH B 52 352 122 HOH HOH . I 6 HOH B 53 353 127 HOH HOH . I 6 HOH B 54 354 62 HOH HOH . I 6 HOH B 55 355 190 HOH HOH . I 6 HOH B 56 356 109 HOH HOH . I 6 HOH B 57 357 71 HOH HOH . I 6 HOH B 58 358 105 HOH HOH . I 6 HOH B 59 359 206 HOH HOH . I 6 HOH B 60 360 42 HOH HOH . I 6 HOH B 61 361 70 HOH HOH . I 6 HOH B 62 362 125 HOH HOH . I 6 HOH B 63 363 65 HOH HOH . I 6 HOH B 64 364 210 HOH HOH . I 6 HOH B 65 365 31 HOH HOH . I 6 HOH B 66 366 66 HOH HOH . I 6 HOH B 67 367 44 HOH HOH . I 6 HOH B 68 368 183 HOH HOH . I 6 HOH B 69 369 50 HOH HOH . I 6 HOH B 70 370 113 HOH HOH . I 6 HOH B 71 371 10 HOH HOH . I 6 HOH B 72 372 213 HOH HOH . I 6 HOH B 73 373 89 HOH HOH . I 6 HOH B 74 374 84 HOH HOH . I 6 HOH B 75 375 185 HOH HOH . I 6 HOH B 76 376 115 HOH HOH . I 6 HOH B 77 377 203 HOH HOH . I 6 HOH B 78 378 48 HOH HOH . I 6 HOH B 79 379 175 HOH HOH . I 6 HOH B 80 380 150 HOH HOH . I 6 HOH B 81 381 49 HOH HOH . I 6 HOH B 82 382 96 HOH HOH . I 6 HOH B 83 383 179 HOH HOH . I 6 HOH B 84 384 13 HOH HOH . I 6 HOH B 85 385 200 HOH HOH . I 6 HOH B 86 386 202 HOH HOH . I 6 HOH B 87 387 14 HOH HOH . I 6 HOH B 88 388 178 HOH HOH . I 6 HOH B 89 389 27 HOH HOH . I 6 HOH B 90 390 159 HOH HOH . I 6 HOH B 91 391 184 HOH HOH . I 6 HOH B 92 392 139 HOH HOH . I 6 HOH B 93 393 174 HOH HOH . I 6 HOH B 94 394 129 HOH HOH . I 6 HOH B 95 395 177 HOH HOH . I 6 HOH B 96 396 26 HOH HOH . I 6 HOH B 97 397 55 HOH HOH . I 6 HOH B 98 398 167 HOH HOH . I 6 HOH B 99 399 205 HOH HOH . I 6 HOH B 100 400 147 HOH HOH . I 6 HOH B 101 401 16 HOH HOH . I 6 HOH B 102 402 172 HOH HOH . I 6 HOH B 103 403 182 HOH HOH . I 6 HOH B 104 404 17 HOH HOH . I 6 HOH B 105 405 165 HOH HOH . I 6 HOH B 106 406 148 HOH HOH . I 6 HOH B 107 407 149 HOH HOH . I 6 HOH B 108 408 207 HOH HOH . I 6 HOH B 109 409 151 HOH HOH . I 6 HOH B 110 410 54 HOH HOH . I 6 HOH B 111 411 171 HOH HOH . I 6 HOH B 112 412 215 HOH HOH . I 6 HOH B 113 413 208 HOH HOH . I 6 HOH B 114 414 214 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 3 20.093 14.103 95.302 1 73.04 ? S DMS 202 A 1 HETATM 2 O O DMS . . . D 3 21.586 14.261 95.141 1 59.35 ? O DMS 202 A 1 HETATM 3 C C1 DMS . . . D 3 19.755 14.079 97.049 1 66.75 ? C1 DMS 202 A 1 HETATM 4 C C2 DMS . . . D 3 19.351 15.669 94.904 1 64.64 ? C2 DMS 202 A 1 # _model_server_stats.io_time_ms 154 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 358 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 4 #