data_6TBP # _model_server_result.job_id xCyH60BIh5F4t5NO8tHCwA _model_server_result.datetime_utc '2024-11-08 01:27:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tbp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 6TBP # _exptl.entry_id 6TBP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.81 _cell.angle_gamma 90 _cell.entry_id 6TBP _cell.length_a 62.739 _cell.length_b 89.286 _cell.length_c 61.106 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TBP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 6TBP _atom_sites.fract_transf_matrix[1][1] 0.015939 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001902 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0112 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016481 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 N0H A 1 201 1 N0H LIG . D 4 DMS B 1 201 2 DMS DMS . E 5 HOH A 1 301 151 HOH HOH . E 5 HOH A 2 302 204 HOH HOH . E 5 HOH A 3 303 232 HOH HOH . E 5 HOH A 4 304 246 HOH HOH . E 5 HOH A 5 305 191 HOH HOH . E 5 HOH A 6 306 176 HOH HOH . E 5 HOH A 7 307 153 HOH HOH . E 5 HOH A 8 308 239 HOH HOH . E 5 HOH A 9 309 44 HOH HOH . E 5 HOH A 10 310 37 HOH HOH . E 5 HOH A 11 311 174 HOH HOH . E 5 HOH A 12 312 56 HOH HOH . E 5 HOH A 13 313 281 HOH HOH . E 5 HOH A 14 314 198 HOH HOH . E 5 HOH A 15 315 29 HOH HOH . E 5 HOH A 16 316 45 HOH HOH . E 5 HOH A 17 317 86 HOH HOH . E 5 HOH A 18 318 197 HOH HOH . E 5 HOH A 19 319 266 HOH HOH . E 5 HOH A 20 320 14 HOH HOH . E 5 HOH A 21 321 90 HOH HOH . E 5 HOH A 22 322 1 HOH HOH . E 5 HOH A 23 323 298 HOH HOH . E 5 HOH A 24 324 5 HOH HOH . E 5 HOH A 25 325 200 HOH HOH . E 5 HOH A 26 326 85 HOH HOH . E 5 HOH A 27 327 278 HOH HOH . E 5 HOH A 28 328 282 HOH HOH . E 5 HOH A 29 329 165 HOH HOH . E 5 HOH A 30 330 20 HOH HOH . E 5 HOH A 31 331 101 HOH HOH . E 5 HOH A 32 332 27 HOH HOH . E 5 HOH A 33 333 231 HOH HOH . E 5 HOH A 34 334 128 HOH HOH . E 5 HOH A 35 335 115 HOH HOH . E 5 HOH A 36 336 51 HOH HOH . E 5 HOH A 37 337 112 HOH HOH . E 5 HOH A 38 338 180 HOH HOH . E 5 HOH A 39 339 28 HOH HOH . E 5 HOH A 40 340 149 HOH HOH . E 5 HOH A 41 341 24 HOH HOH . E 5 HOH A 42 342 55 HOH HOH . E 5 HOH A 43 343 194 HOH HOH . E 5 HOH A 44 344 161 HOH HOH . E 5 HOH A 45 345 35 HOH HOH . E 5 HOH A 46 346 201 HOH HOH . E 5 HOH A 47 347 164 HOH HOH . E 5 HOH A 48 348 188 HOH HOH . E 5 HOH A 49 349 179 HOH HOH . E 5 HOH A 50 350 97 HOH HOH . E 5 HOH A 51 351 236 HOH HOH . E 5 HOH A 52 352 43 HOH HOH . E 5 HOH A 53 353 49 HOH HOH . E 5 HOH A 54 354 66 HOH HOH . E 5 HOH A 55 355 171 HOH HOH . E 5 HOH A 56 356 119 HOH HOH . E 5 HOH A 57 357 196 HOH HOH . E 5 HOH A 58 358 25 HOH HOH . E 5 HOH A 59 359 23 HOH HOH . E 5 HOH A 60 360 73 HOH HOH . E 5 HOH A 61 361 69 HOH HOH . E 5 HOH A 62 362 4 HOH HOH . E 5 HOH A 63 363 189 HOH HOH . E 5 HOH A 64 364 291 HOH HOH . E 5 HOH A 65 365 262 HOH HOH . E 5 HOH A 66 366 170 HOH HOH . E 5 HOH A 67 367 110 HOH HOH . E 5 HOH A 68 368 116 HOH HOH . E 5 HOH A 69 369 18 HOH HOH . E 5 HOH A 70 370 42 HOH HOH . E 5 HOH A 71 371 184 HOH HOH . E 5 HOH A 72 372 32 HOH HOH . E 5 HOH A 73 373 186 HOH HOH . E 5 HOH A 74 374 12 HOH HOH . E 5 HOH A 75 375 145 HOH HOH . E 5 HOH A 76 376 78 HOH HOH . E 5 HOH A 77 377 19 HOH HOH . E 5 HOH A 78 378 166 HOH HOH . E 5 HOH A 79 379 10 HOH HOH . E 5 HOH A 80 380 48 HOH HOH . E 5 HOH A 81 381 61 HOH HOH . E 5 HOH A 82 382 235 HOH HOH . E 5 HOH A 83 383 107 HOH HOH . E 5 HOH A 84 384 254 HOH HOH . E 5 HOH A 85 385 132 HOH HOH . E 5 HOH A 86 386 168 HOH HOH . E 5 HOH A 87 387 159 HOH HOH . E 5 HOH A 88 388 58 HOH HOH . E 5 HOH A 89 389 169 HOH HOH . E 5 HOH A 90 390 203 HOH HOH . E 5 HOH A 91 391 118 HOH HOH . E 5 HOH A 92 392 39 HOH HOH . E 5 HOH A 93 393 192 HOH HOH . E 5 HOH A 94 394 111 HOH HOH . E 5 HOH A 95 395 185 HOH HOH . E 5 HOH A 96 396 275 HOH HOH . E 5 HOH A 97 397 130 HOH HOH . E 5 HOH A 98 398 276 HOH HOH . E 5 HOH A 99 399 271 HOH HOH . E 5 HOH A 100 400 270 HOH HOH . E 5 HOH A 101 401 181 HOH HOH . E 5 HOH A 102 402 8 HOH HOH . E 5 HOH A 103 403 146 HOH HOH . E 5 HOH A 104 404 158 HOH HOH . E 5 HOH A 105 405 177 HOH HOH . E 5 HOH A 106 406 190 HOH HOH . E 5 HOH A 107 407 102 HOH HOH . E 5 HOH A 108 408 154 HOH HOH . E 5 HOH A 109 409 127 HOH HOH . E 5 HOH A 110 410 162 HOH HOH . E 5 HOH A 111 411 137 HOH HOH . E 5 HOH A 112 412 138 HOH HOH . E 5 HOH A 113 413 144 HOH HOH . E 5 HOH A 114 414 122 HOH HOH . E 5 HOH A 115 415 98 HOH HOH . E 5 HOH A 116 416 202 HOH HOH . E 5 HOH A 117 417 156 HOH HOH . E 5 HOH A 118 418 152 HOH HOH . E 5 HOH A 119 419 182 HOH HOH . E 5 HOH A 120 420 136 HOH HOH . E 5 HOH A 121 421 163 HOH HOH . E 5 HOH A 122 422 229 HOH HOH . E 5 HOH A 123 423 178 HOH HOH . E 5 HOH A 124 424 123 HOH HOH . E 5 HOH A 125 425 290 HOH HOH . E 5 HOH A 126 426 82 HOH HOH . E 5 HOH A 127 427 265 HOH HOH . E 5 HOH A 128 428 114 HOH HOH . E 5 HOH A 129 429 261 HOH HOH . E 5 HOH A 130 430 67 HOH HOH . E 5 HOH A 131 431 129 HOH HOH . E 5 HOH A 132 432 302 HOH HOH . E 5 HOH A 133 433 142 HOH HOH . E 5 HOH A 134 434 187 HOH HOH . E 5 HOH A 135 435 167 HOH HOH . E 5 HOH A 136 436 183 HOH HOH . E 5 HOH A 137 437 273 HOH HOH . E 5 HOH A 138 438 117 HOH HOH . E 5 HOH A 139 439 150 HOH HOH . E 5 HOH A 140 440 274 HOH HOH . E 5 HOH A 141 441 109 HOH HOH . E 5 HOH A 142 442 260 HOH HOH . E 5 HOH A 143 443 155 HOH HOH . E 5 HOH A 144 444 297 HOH HOH . E 5 HOH A 145 445 300 HOH HOH . E 5 HOH A 146 446 247 HOH HOH . E 5 HOH A 147 447 134 HOH HOH . E 5 HOH A 148 448 131 HOH HOH . E 5 HOH A 149 449 113 HOH HOH . E 5 HOH A 150 450 93 HOH HOH . E 5 HOH A 151 451 143 HOH HOH . E 5 HOH A 152 452 133 HOH HOH . E 5 HOH A 153 453 279 HOH HOH . E 5 HOH A 154 454 160 HOH HOH . E 5 HOH A 155 455 263 HOH HOH . E 5 HOH A 156 456 195 HOH HOH . E 5 HOH A 157 457 280 HOH HOH . E 5 HOH A 158 458 126 HOH HOH . E 5 HOH A 159 459 135 HOH HOH . E 5 HOH A 160 460 272 HOH HOH . E 5 HOH A 161 461 139 HOH HOH . E 5 HOH A 162 462 120 HOH HOH . E 5 HOH A 163 463 249 HOH HOH . E 5 HOH A 164 464 250 HOH HOH . E 5 HOH A 165 465 125 HOH HOH . E 5 HOH A 166 466 264 HOH HOH . E 5 HOH A 167 467 258 HOH HOH . E 5 HOH A 168 468 299 HOH HOH . E 5 HOH A 169 469 121 HOH HOH . E 5 HOH A 170 470 267 HOH HOH . E 5 HOH A 171 471 269 HOH HOH . E 5 HOH A 172 472 292 HOH HOH . E 5 HOH A 173 473 237 HOH HOH . E 5 HOH A 174 474 141 HOH HOH . E 5 HOH A 175 475 157 HOH HOH . E 5 HOH A 176 476 240 HOH HOH . E 5 HOH A 177 477 175 HOH HOH . E 5 HOH A 178 478 140 HOH HOH . E 5 HOH A 179 479 147 HOH HOH . E 5 HOH A 180 480 172 HOH HOH . E 5 HOH A 181 481 124 HOH HOH . E 5 HOH A 182 482 193 HOH HOH . E 5 HOH A 183 483 277 HOH HOH . E 5 HOH A 184 484 148 HOH HOH . E 5 HOH A 185 485 293 HOH HOH . E 5 HOH A 186 486 301 HOH HOH . E 5 HOH A 187 487 173 HOH HOH . E 5 HOH A 188 488 268 HOH HOH . E 5 HOH A 189 489 305 HOH HOH . F 5 HOH B 1 301 253 HOH HOH . F 5 HOH B 2 302 108 HOH HOH . F 5 HOH B 3 303 220 HOH HOH . F 5 HOH B 4 304 30 HOH HOH . F 5 HOH B 5 305 65 HOH HOH . F 5 HOH B 6 306 234 HOH HOH . F 5 HOH B 7 307 230 HOH HOH . F 5 HOH B 8 308 199 HOH HOH . F 5 HOH B 9 309 77 HOH HOH . F 5 HOH B 10 310 80 HOH HOH . F 5 HOH B 11 311 233 HOH HOH . F 5 HOH B 12 312 52 HOH HOH . F 5 HOH B 13 313 89 HOH HOH . F 5 HOH B 14 314 62 HOH HOH . F 5 HOH B 15 315 70 HOH HOH . F 5 HOH B 16 316 306 HOH HOH . F 5 HOH B 17 317 241 HOH HOH . F 5 HOH B 18 318 72 HOH HOH . F 5 HOH B 19 319 64 HOH HOH . F 5 HOH B 20 320 288 HOH HOH . F 5 HOH B 21 321 46 HOH HOH . F 5 HOH B 22 322 208 HOH HOH . F 5 HOH B 23 323 79 HOH HOH . F 5 HOH B 24 324 6 HOH HOH . F 5 HOH B 25 325 54 HOH HOH . F 5 HOH B 26 326 216 HOH HOH . F 5 HOH B 27 327 21 HOH HOH . F 5 HOH B 28 328 95 HOH HOH . F 5 HOH B 29 329 303 HOH HOH . F 5 HOH B 30 330 209 HOH HOH . F 5 HOH B 31 331 22 HOH HOH . F 5 HOH B 32 332 47 HOH HOH . F 5 HOH B 33 333 213 HOH HOH . F 5 HOH B 34 334 16 HOH HOH . F 5 HOH B 35 335 284 HOH HOH . F 5 HOH B 36 336 215 HOH HOH . F 5 HOH B 37 337 217 HOH HOH . F 5 HOH B 38 338 3 HOH HOH . F 5 HOH B 39 339 2 HOH HOH . F 5 HOH B 40 340 41 HOH HOH . F 5 HOH B 41 341 31 HOH HOH . F 5 HOH B 42 342 36 HOH HOH . F 5 HOH B 43 343 96 HOH HOH . F 5 HOH B 44 344 245 HOH HOH . F 5 HOH B 45 345 238 HOH HOH . F 5 HOH B 46 346 207 HOH HOH . F 5 HOH B 47 347 222 HOH HOH . F 5 HOH B 48 348 242 HOH HOH . F 5 HOH B 49 349 211 HOH HOH . F 5 HOH B 50 350 17 HOH HOH . F 5 HOH B 51 351 11 HOH HOH . F 5 HOH B 52 352 53 HOH HOH . F 5 HOH B 53 353 103 HOH HOH . F 5 HOH B 54 354 7 HOH HOH . F 5 HOH B 55 355 63 HOH HOH . F 5 HOH B 56 356 227 HOH HOH . F 5 HOH B 57 357 83 HOH HOH . F 5 HOH B 58 358 57 HOH HOH . F 5 HOH B 59 359 75 HOH HOH . F 5 HOH B 60 360 214 HOH HOH . F 5 HOH B 61 361 38 HOH HOH . F 5 HOH B 62 362 106 HOH HOH . F 5 HOH B 63 363 87 HOH HOH . F 5 HOH B 64 364 33 HOH HOH . F 5 HOH B 65 365 40 HOH HOH . F 5 HOH B 66 366 212 HOH HOH . F 5 HOH B 67 367 59 HOH HOH . F 5 HOH B 68 368 84 HOH HOH . F 5 HOH B 69 369 68 HOH HOH . F 5 HOH B 70 370 94 HOH HOH . F 5 HOH B 71 371 26 HOH HOH . F 5 HOH B 72 372 224 HOH HOH . F 5 HOH B 73 373 81 HOH HOH . F 5 HOH B 74 374 34 HOH HOH . F 5 HOH B 75 375 251 HOH HOH . F 5 HOH B 76 376 60 HOH HOH . F 5 HOH B 77 377 100 HOH HOH . F 5 HOH B 78 378 50 HOH HOH . F 5 HOH B 79 379 88 HOH HOH . F 5 HOH B 80 380 9 HOH HOH . F 5 HOH B 81 381 285 HOH HOH . F 5 HOH B 82 382 210 HOH HOH . F 5 HOH B 83 383 13 HOH HOH . F 5 HOH B 84 384 15 HOH HOH . F 5 HOH B 85 385 76 HOH HOH . F 5 HOH B 86 386 74 HOH HOH . F 5 HOH B 87 387 92 HOH HOH . F 5 HOH B 88 388 243 HOH HOH . F 5 HOH B 89 389 296 HOH HOH . F 5 HOH B 90 390 307 HOH HOH . F 5 HOH B 91 391 226 HOH HOH . F 5 HOH B 92 392 104 HOH HOH . F 5 HOH B 93 393 221 HOH HOH . F 5 HOH B 94 394 225 HOH HOH . F 5 HOH B 95 395 255 HOH HOH . F 5 HOH B 96 396 256 HOH HOH . F 5 HOH B 97 397 223 HOH HOH . F 5 HOH B 98 398 205 HOH HOH . F 5 HOH B 99 399 287 HOH HOH . F 5 HOH B 100 400 105 HOH HOH . F 5 HOH B 101 401 252 HOH HOH . F 5 HOH B 102 402 206 HOH HOH . F 5 HOH B 103 403 71 HOH HOH . F 5 HOH B 104 404 259 HOH HOH . F 5 HOH B 105 405 219 HOH HOH . F 5 HOH B 106 406 294 HOH HOH . F 5 HOH B 107 407 248 HOH HOH . F 5 HOH B 108 408 283 HOH HOH . F 5 HOH B 109 409 99 HOH HOH . F 5 HOH B 110 410 289 HOH HOH . F 5 HOH B 111 411 257 HOH HOH . F 5 HOH B 112 412 91 HOH HOH . F 5 HOH B 113 413 244 HOH HOH . F 5 HOH B 114 414 286 HOH HOH . F 5 HOH B 115 415 228 HOH HOH . F 5 HOH B 116 416 308 HOH HOH . F 5 HOH B 117 417 295 HOH HOH . F 5 HOH B 118 418 304 HOH HOH . F 5 HOH B 119 419 218 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 4 3.3 -15.963 59.686 1 61.51 ? S DMS 201 B 1 HETATM 2 O O DMS . . . D 4 2.913 -16.387 61.116 1 43.14 ? O DMS 201 B 1 HETATM 3 C C1 DMS . . . D 4 5.082 -15.948 59.637 1 37.66 ? C1 DMS 201 B 1 HETATM 4 C C2 DMS . . . D 4 3.035 -17.417 58.674 1 62.47 ? C2 DMS 201 B 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 351 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #