data_6TCN # _model_server_result.job_id B1poLTk9RajxMDLg3w9i1A _model_server_result.datetime_utc '2024-11-22 00:24:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tcn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 6TCN # _exptl.entry_id 6TCN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.58 _cell.angle_gamma 90 _cell.entry_id 6TCN _cell.length_a 85.295 _cell.length_b 73.569 _cell.length_c 87.098 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TCN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N,R,S 1 1 C,D,O,P,Q,T,U 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 92 L CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf2 A SG CYS 138 L CYS 138 1_555 A SG CYS 198 L CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf4 B SG CYS 148 H CYS 148 1_555 B SG CYS 204 H CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 C SG CYS 23 A CYS 23 1_555 C SG CYS 92 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf6 C SG CYS 138 A CYS 138 1_555 C SG CYS 198 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 D SG CYS 22 B CYS 22 1_555 D SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf8 D SG CYS 148 B CYS 148 1_555 D SG CYS 204 B CYS 204 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.044 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6TCN _atom_sites.fract_transf_matrix[1][1] 0.011724 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005866 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013593 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012838 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 L 1 301 3 SO4 SO4 . F 4 EDO L 1 302 2 EDO EDO . G 4 EDO L 1 303 3 EDO EDO . H 4 EDO L 1 304 4 EDO EDO . I 4 EDO L 1 305 5 EDO EDO . J 3 SO4 H 1 301 1 SO4 SO4 . K 4 EDO H 1 302 1 EDO EDO . L 4 EDO H 1 303 6 EDO EDO . M 4 EDO H 1 304 8 EDO EDO . N 5 PEG H 1 305 1 PEG PEG . O 4 EDO A 1 301 7 EDO EDO . P 6 TRS A 1 302 1 TRS TRS . Q 3 SO4 B 1 301 2 SO4 SO4 . R 7 HOH L 1 401 70 HOH HOH . R 7 HOH L 2 402 170 HOH HOH . R 7 HOH L 3 403 252 HOH HOH . R 7 HOH L 4 404 123 HOH HOH . R 7 HOH L 5 405 39 HOH HOH . R 7 HOH L 6 406 88 HOH HOH . R 7 HOH L 7 407 105 HOH HOH . R 7 HOH L 8 408 5 HOH HOH . R 7 HOH L 9 409 208 HOH HOH . R 7 HOH L 10 410 195 HOH HOH . R 7 HOH L 11 411 158 HOH HOH . R 7 HOH L 12 412 25 HOH HOH . R 7 HOH L 13 413 8 HOH HOH . R 7 HOH L 14 414 2 HOH HOH . R 7 HOH L 15 415 14 HOH HOH . R 7 HOH L 16 416 180 HOH HOH . R 7 HOH L 17 417 54 HOH HOH . R 7 HOH L 18 418 176 HOH HOH . R 7 HOH L 19 419 162 HOH HOH . R 7 HOH L 20 420 199 HOH HOH . R 7 HOH L 21 421 142 HOH HOH . R 7 HOH L 22 422 84 HOH HOH . R 7 HOH L 23 423 175 HOH HOH . R 7 HOH L 24 424 89 HOH HOH . R 7 HOH L 25 425 245 HOH HOH . R 7 HOH L 26 426 173 HOH HOH . R 7 HOH L 27 427 68 HOH HOH . R 7 HOH L 28 428 82 HOH HOH . R 7 HOH L 29 429 172 HOH HOH . R 7 HOH L 30 430 9 HOH HOH . R 7 HOH L 31 431 3 HOH HOH . R 7 HOH L 32 432 233 HOH HOH . R 7 HOH L 33 433 146 HOH HOH . R 7 HOH L 34 434 38 HOH HOH . R 7 HOH L 35 435 178 HOH HOH . R 7 HOH L 36 436 24 HOH HOH . R 7 HOH L 37 437 177 HOH HOH . R 7 HOH L 38 438 4 HOH HOH . R 7 HOH L 39 439 171 HOH HOH . R 7 HOH L 40 440 223 HOH HOH . R 7 HOH L 41 441 241 HOH HOH . R 7 HOH L 42 442 130 HOH HOH . R 7 HOH L 43 443 159 HOH HOH . R 7 HOH L 44 444 56 HOH HOH . R 7 HOH L 45 445 147 HOH HOH . R 7 HOH L 46 446 112 HOH HOH . R 7 HOH L 47 447 181 HOH HOH . R 7 HOH L 48 448 174 HOH HOH . R 7 HOH L 49 449 122 HOH HOH . R 7 HOH L 50 450 21 HOH HOH . R 7 HOH L 51 451 66 HOH HOH . R 7 HOH L 52 452 19 HOH HOH . R 7 HOH L 53 453 67 HOH HOH . R 7 HOH L 54 454 132 HOH HOH . R 7 HOH L 55 455 148 HOH HOH . R 7 HOH L 56 456 211 HOH HOH . R 7 HOH L 57 457 201 HOH HOH . R 7 HOH L 58 458 207 HOH HOH . R 7 HOH L 59 459 244 HOH HOH . R 7 HOH L 60 460 22 HOH HOH . R 7 HOH L 61 461 139 HOH HOH . R 7 HOH L 62 462 210 HOH HOH . R 7 HOH L 63 463 206 HOH HOH . R 7 HOH L 64 464 124 HOH HOH . R 7 HOH L 65 465 229 HOH HOH . R 7 HOH L 66 466 228 HOH HOH . R 7 HOH L 67 467 65 HOH HOH . R 7 HOH L 68 468 29 HOH HOH . R 7 HOH L 69 469 47 HOH HOH . R 7 HOH L 70 470 109 HOH HOH . R 7 HOH L 71 471 55 HOH HOH . R 7 HOH L 72 472 169 HOH HOH . R 7 HOH L 73 473 141 HOH HOH . R 7 HOH L 74 474 232 HOH HOH . R 7 HOH L 75 475 234 HOH HOH . S 7 HOH H 1 401 152 HOH HOH . S 7 HOH H 2 402 251 HOH HOH . S 7 HOH H 3 403 163 HOH HOH . S 7 HOH H 4 404 203 HOH HOH . S 7 HOH H 5 405 149 HOH HOH . S 7 HOH H 6 406 80 HOH HOH . S 7 HOH H 7 407 133 HOH HOH . S 7 HOH H 8 408 154 HOH HOH . S 7 HOH H 9 409 72 HOH HOH . S 7 HOH H 10 410 71 HOH HOH . S 7 HOH H 11 411 86 HOH HOH . S 7 HOH H 12 412 28 HOH HOH . S 7 HOH H 13 413 214 HOH HOH . S 7 HOH H 14 414 135 HOH HOH . S 7 HOH H 15 415 119 HOH HOH . S 7 HOH H 16 416 165 HOH HOH . S 7 HOH H 17 417 167 HOH HOH . S 7 HOH H 18 418 59 HOH HOH . S 7 HOH H 19 419 6 HOH HOH . S 7 HOH H 20 420 87 HOH HOH . S 7 HOH H 21 421 220 HOH HOH . S 7 HOH H 22 422 117 HOH HOH . S 7 HOH H 23 423 114 HOH HOH . S 7 HOH H 24 424 161 HOH HOH . S 7 HOH H 25 425 150 HOH HOH . S 7 HOH H 26 426 17 HOH HOH . S 7 HOH H 27 427 79 HOH HOH . S 7 HOH H 28 428 120 HOH HOH . S 7 HOH H 29 429 85 HOH HOH . S 7 HOH H 30 430 106 HOH HOH . S 7 HOH H 31 431 131 HOH HOH . S 7 HOH H 32 432 1 HOH HOH . S 7 HOH H 33 433 11 HOH HOH . S 7 HOH H 34 434 209 HOH HOH . S 7 HOH H 35 435 58 HOH HOH . S 7 HOH H 36 436 221 HOH HOH . S 7 HOH H 37 437 77 HOH HOH . S 7 HOH H 38 438 83 HOH HOH . S 7 HOH H 39 439 78 HOH HOH . S 7 HOH H 40 440 100 HOH HOH . S 7 HOH H 41 441 151 HOH HOH . S 7 HOH H 42 442 237 HOH HOH . S 7 HOH H 43 443 99 HOH HOH . S 7 HOH H 44 444 18 HOH HOH . S 7 HOH H 45 445 26 HOH HOH . S 7 HOH H 46 446 118 HOH HOH . S 7 HOH H 47 447 73 HOH HOH . S 7 HOH H 48 448 27 HOH HOH . S 7 HOH H 49 449 69 HOH HOH . S 7 HOH H 50 450 36 HOH HOH . S 7 HOH H 51 451 121 HOH HOH . S 7 HOH H 52 452 204 HOH HOH . S 7 HOH H 53 453 164 HOH HOH . S 7 HOH H 54 454 153 HOH HOH . S 7 HOH H 55 455 212 HOH HOH . S 7 HOH H 56 456 224 HOH HOH . S 7 HOH H 57 457 7 HOH HOH . S 7 HOH H 58 458 225 HOH HOH . S 7 HOH H 59 459 104 HOH HOH . S 7 HOH H 60 460 215 HOH HOH . S 7 HOH H 61 461 37 HOH HOH . S 7 HOH H 62 462 238 HOH HOH . S 7 HOH H 63 463 81 HOH HOH . S 7 HOH H 64 464 213 HOH HOH . S 7 HOH H 65 465 155 HOH HOH . S 7 HOH H 66 466 205 HOH HOH . S 7 HOH H 67 467 140 HOH HOH . S 7 HOH H 68 468 34 HOH HOH . S 7 HOH H 69 469 74 HOH HOH . S 7 HOH H 70 470 113 HOH HOH . S 7 HOH H 71 471 57 HOH HOH . S 7 HOH H 72 472 134 HOH HOH . T 7 HOH A 1 401 103 HOH HOH . T 7 HOH A 2 402 90 HOH HOH . T 7 HOH A 3 403 182 HOH HOH . T 7 HOH A 4 404 198 HOH HOH . T 7 HOH A 5 405 49 HOH HOH . T 7 HOH A 6 406 107 HOH HOH . T 7 HOH A 7 407 60 HOH HOH . T 7 HOH A 8 408 126 HOH HOH . T 7 HOH A 9 409 50 HOH HOH . T 7 HOH A 10 410 129 HOH HOH . T 7 HOH A 11 411 48 HOH HOH . T 7 HOH A 12 412 44 HOH HOH . T 7 HOH A 13 413 246 HOH HOH . T 7 HOH A 14 414 127 HOH HOH . T 7 HOH A 15 415 61 HOH HOH . T 7 HOH A 16 416 216 HOH HOH . T 7 HOH A 17 417 51 HOH HOH . T 7 HOH A 18 418 92 HOH HOH . T 7 HOH A 19 419 52 HOH HOH . T 7 HOH A 20 420 144 HOH HOH . T 7 HOH A 21 421 91 HOH HOH . T 7 HOH A 22 422 33 HOH HOH . T 7 HOH A 23 423 12 HOH HOH . T 7 HOH A 24 424 200 HOH HOH . T 7 HOH A 25 425 183 HOH HOH . T 7 HOH A 26 426 143 HOH HOH . T 7 HOH A 27 427 110 HOH HOH . T 7 HOH A 28 428 136 HOH HOH . T 7 HOH A 29 429 108 HOH HOH . T 7 HOH A 30 430 218 HOH HOH . T 7 HOH A 31 431 13 HOH HOH . T 7 HOH A 32 432 145 HOH HOH . T 7 HOH A 33 433 30 HOH HOH . T 7 HOH A 34 434 41 HOH HOH . T 7 HOH A 35 435 125 HOH HOH . T 7 HOH A 36 436 160 HOH HOH . T 7 HOH A 37 437 32 HOH HOH . T 7 HOH A 38 438 184 HOH HOH . T 7 HOH A 39 439 42 HOH HOH . T 7 HOH A 40 440 235 HOH HOH . T 7 HOH A 41 441 222 HOH HOH . T 7 HOH A 42 442 31 HOH HOH . T 7 HOH A 43 443 64 HOH HOH . T 7 HOH A 44 444 186 HOH HOH . T 7 HOH A 45 445 96 HOH HOH . T 7 HOH A 46 446 62 HOH HOH . T 7 HOH A 47 447 116 HOH HOH . T 7 HOH A 48 448 196 HOH HOH . T 7 HOH A 49 449 40 HOH HOH . T 7 HOH A 50 450 168 HOH HOH . T 7 HOH A 51 451 247 HOH HOH . T 7 HOH A 52 452 166 HOH HOH . T 7 HOH A 53 453 227 HOH HOH . T 7 HOH A 54 454 53 HOH HOH . T 7 HOH A 55 455 111 HOH HOH . T 7 HOH A 56 456 35 HOH HOH . T 7 HOH A 57 457 115 HOH HOH . T 7 HOH A 58 458 101 HOH HOH . T 7 HOH A 59 459 98 HOH HOH . T 7 HOH A 60 460 185 HOH HOH . T 7 HOH A 61 461 217 HOH HOH . T 7 HOH A 62 462 197 HOH HOH . U 7 HOH B 1 401 239 HOH HOH . U 7 HOH B 2 402 253 HOH HOH . U 7 HOH B 3 403 240 HOH HOH . U 7 HOH B 4 404 188 HOH HOH . U 7 HOH B 5 405 102 HOH HOH . U 7 HOH B 6 406 242 HOH HOH . U 7 HOH B 7 407 20 HOH HOH . U 7 HOH B 8 408 15 HOH HOH . U 7 HOH B 9 409 46 HOH HOH . U 7 HOH B 10 410 202 HOH HOH . U 7 HOH B 11 411 250 HOH HOH . U 7 HOH B 12 412 187 HOH HOH . U 7 HOH B 13 413 45 HOH HOH . U 7 HOH B 14 414 10 HOH HOH . U 7 HOH B 15 415 23 HOH HOH . U 7 HOH B 16 416 95 HOH HOH . U 7 HOH B 17 417 179 HOH HOH . U 7 HOH B 18 418 236 HOH HOH . U 7 HOH B 19 419 43 HOH HOH . U 7 HOH B 20 420 128 HOH HOH . U 7 HOH B 21 421 97 HOH HOH . U 7 HOH B 22 422 243 HOH HOH . U 7 HOH B 23 423 192 HOH HOH . U 7 HOH B 24 424 16 HOH HOH . U 7 HOH B 25 425 189 HOH HOH . U 7 HOH B 26 426 226 HOH HOH . U 7 HOH B 27 427 249 HOH HOH . U 7 HOH B 28 428 94 HOH HOH . U 7 HOH B 29 429 191 HOH HOH . U 7 HOH B 30 430 254 HOH HOH . U 7 HOH B 31 431 63 HOH HOH . U 7 HOH B 32 432 190 HOH HOH . U 7 HOH B 33 433 93 HOH HOH . U 7 HOH B 34 434 248 HOH HOH . U 7 HOH B 35 435 137 HOH HOH . U 7 HOH B 36 436 193 HOH HOH . U 7 HOH B 37 437 138 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 4 40.697 -0.567 0.741 1 43.58 ? C1 EDO 302 L 1 HETATM 2 O O1 EDO . . . F 4 39.889 -1.52 0.04 1 43.64 ? O1 EDO 302 L 1 HETATM 3 C C2 EDO . . . F 4 39.973 0.773 0.783 1 45.27 ? C2 EDO 302 L 1 HETATM 4 O O2 EDO . . . F 4 40.179 1.391 2.059 1 43.21 ? O2 EDO 302 L 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #