data_6TDG
#
_model_server_result.job_id            T4rCiHBHRWtfZAGIo3TetQ 
_model_server_result.datetime_utc      '2025-01-11 03:21:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6tdg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    6TDG 
#
_exptl.entry_id    6TDG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              809.571 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETYL COENZYME *A' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6TDG 
_cell.length_a            70.21 
_cell.length_b            101.2 
_cell.length_c            56.37 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6TDG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -28.185 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C23 H38 N7 O17 P3 S' 
_chem_comp.formula_weight    809.571 
_chem_comp.id                ACO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETYL COENZYME *A' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1A C2A ACO sing 1 n y 
N1A C6A ACO doub 2 n y 
C2A N3A ACO doub 3 n y 
C2A H2A ACO sing 4 n n 
N3A C4A ACO sing 5 n y 
C4A C5A ACO doub 6 n y 
C4A N9A ACO sing 7 n y 
C5A C6A ACO sing 8 n y 
C5A N7A ACO sing 9 n y 
C6A N6A ACO sing 10 n n 
N6A H61A ACO sing 11 n n 
N6A H62A ACO sing 12 n n 
N7A C8A ACO doub 13 n y 
C8A N9A ACO sing 14 n y 
C8A H8A ACO sing 15 n n 
N9A C1B ACO sing 16 n n 
C1B C2B ACO sing 17 n n 
C1B O4B ACO sing 18 n n 
C1B H1B ACO sing 19 n n 
C2B O2B ACO sing 20 n n 
C2B C3B ACO sing 21 n n 
C2B H2B ACO sing 22 n n 
O2B HO2A ACO sing 23 n n 
C3B O3B ACO sing 24 n n 
C3B C4B ACO sing 25 n n 
C3B H3B ACO sing 26 n n 
O3B P3B ACO sing 27 n n 
P3B O7A ACO doub 28 n n 
P3B O8A ACO sing 29 n n 
P3B O9A ACO sing 30 n n 
O8A HOA8 ACO sing 31 n n 
O9A HOA9 ACO sing 32 n n 
C4B O4B ACO sing 33 n n 
C4B C5B ACO sing 34 n n 
C4B H4B ACO sing 35 n n 
C5B O5B ACO sing 36 n n 
C5B H51A ACO sing 37 n n 
C5B H52A ACO sing 38 n n 
O5B P1A ACO sing 39 n n 
P1A O1A ACO doub 40 n n 
P1A O2A ACO sing 41 n n 
P1A O3A ACO sing 42 n n 
O2A HOA2 ACO sing 43 n n 
O3A P2A ACO sing 44 n n 
P2A O4A ACO doub 45 n n 
P2A O5A ACO sing 46 n n 
P2A O6A ACO sing 47 n n 
O5A HOA5 ACO sing 48 n n 
O6A CCP ACO sing 49 n n 
CBP CCP ACO sing 50 n n 
CBP CDP ACO sing 51 n n 
CBP CEP ACO sing 52 n n 
CBP CAP ACO sing 53 n n 
CCP H121 ACO sing 54 n n 
CCP H122 ACO sing 55 n n 
CDP H131 ACO sing 56 n n 
CDP H132 ACO sing 57 n n 
CDP H133 ACO sing 58 n n 
CEP H141 ACO sing 59 n n 
CEP H142 ACO sing 60 n n 
CEP H143 ACO sing 61 n n 
CAP OAP ACO sing 62 n n 
CAP C9P ACO sing 63 n n 
CAP H10 ACO sing 64 n n 
OAP HO1 ACO sing 65 n n 
C9P O9P ACO doub 66 n n 
C9P N8P ACO sing 67 n n 
N8P C7P ACO sing 68 n n 
N8P HN8 ACO sing 69 n n 
C7P C6P ACO sing 70 n n 
C7P H71 ACO sing 71 n n 
C7P H72 ACO sing 72 n n 
C6P C5P ACO sing 73 n n 
C6P H61 ACO sing 74 n n 
C6P H62 ACO sing 75 n n 
C5P O5P ACO doub 76 n n 
C5P N4P ACO sing 77 n n 
N4P C3P ACO sing 78 n n 
N4P HN4 ACO sing 79 n n 
C3P C2P ACO sing 80 n n 
C3P H31 ACO sing 81 n n 
C3P H32 ACO sing 82 n n 
C2P S1P ACO sing 83 n n 
C2P H21 ACO sing 84 n n 
C2P H22 ACO sing 85 n n 
S1P C ACO sing 86 n n 
C O ACO doub 87 n n 
C CH3 ACO sing 88 n n 
CH3 HH31 ACO sing 89 n n 
CH3 HH32 ACO sing 90 n n 
CH3 HH33 ACO sing 91 n n 
#
_atom_sites.entry_id                     6TDG 
_atom_sites.fract_transf_matrix[1][1]    0.014243 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009881 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01774 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ACO A 1 201 201 ACO ACO . 
C 3 N3W A 1 202 1 N3W DRG . 
D 4 HOH A 1 301 4 HOH HOH . 
D 4 HOH A 2 302 86 HOH HOH . 
D 4 HOH A 3 303 26 HOH HOH . 
D 4 HOH A 4 304 5 HOH HOH . 
D 4 HOH A 5 305 50 HOH HOH . 
D 4 HOH A 6 306 8 HOH HOH . 
D 4 HOH A 7 307 45 HOH HOH . 
D 4 HOH A 8 308 24 HOH HOH . 
D 4 HOH A 9 309 73 HOH HOH . 
D 4 HOH A 10 310 29 HOH HOH . 
D 4 HOH A 11 311 19 HOH HOH . 
D 4 HOH A 12 312 38 HOH HOH . 
D 4 HOH A 13 313 18 HOH HOH . 
D 4 HOH A 14 314 37 HOH HOH . 
D 4 HOH A 15 315 66 HOH HOH . 
D 4 HOH A 16 316 36 HOH HOH . 
D 4 HOH A 17 317 33 HOH HOH . 
D 4 HOH A 18 318 53 HOH HOH . 
D 4 HOH A 19 319 65 HOH HOH . 
D 4 HOH A 20 320 85 HOH HOH . 
D 4 HOH A 21 321 13 HOH HOH . 
D 4 HOH A 22 322 17 HOH HOH . 
D 4 HOH A 23 323 72 HOH HOH . 
D 4 HOH A 24 324 43 HOH HOH . 
D 4 HOH A 25 325 54 HOH HOH . 
D 4 HOH A 26 326 84 HOH HOH . 
D 4 HOH A 27 327 79 HOH HOH . 
D 4 HOH A 28 328 34 HOH HOH . 
D 4 HOH A 29 329 39 HOH HOH . 
D 4 HOH A 30 330 14 HOH HOH . 
D 4 HOH A 31 331 44 HOH HOH . 
D 4 HOH A 32 332 1 HOH HOH . 
D 4 HOH A 33 333 41 HOH HOH . 
D 4 HOH A 34 334 60 HOH HOH . 
D 4 HOH A 35 335 63 HOH HOH . 
D 4 HOH A 36 336 55 HOH HOH . 
D 4 HOH A 37 337 31 HOH HOH . 
D 4 HOH A 38 338 21 HOH HOH . 
D 4 HOH A 39 339 46 HOH HOH . 
D 4 HOH A 40 340 35 HOH HOH . 
D 4 HOH A 41 341 11 HOH HOH . 
D 4 HOH A 42 342 40 HOH HOH . 
D 4 HOH A 43 343 48 HOH HOH . 
D 4 HOH A 44 344 52 HOH HOH . 
D 4 HOH A 45 345 30 HOH HOH . 
D 4 HOH A 46 346 56 HOH HOH . 
D 4 HOH A 47 347 80 HOH HOH . 
D 4 HOH A 48 348 6 HOH HOH . 
D 4 HOH A 49 349 22 HOH HOH . 
D 4 HOH A 50 350 81 HOH HOH . 
D 4 HOH A 51 351 42 HOH HOH . 
D 4 HOH A 52 352 12 HOH HOH . 
D 4 HOH A 53 353 23 HOH HOH . 
D 4 HOH A 54 354 51 HOH HOH . 
D 4 HOH A 55 355 62 HOH HOH . 
D 4 HOH A 56 356 83 HOH HOH . 
D 4 HOH A 57 357 32 HOH HOH . 
D 4 HOH A 58 358 68 HOH HOH . 
D 4 HOH A 59 359 64 HOH HOH . 
D 4 HOH A 60 360 27 HOH HOH . 
D 4 HOH A 61 361 16 HOH HOH . 
D 4 HOH A 62 362 67 HOH HOH . 
D 4 HOH A 63 363 77 HOH HOH . 
D 4 HOH A 64 364 28 HOH HOH . 
D 4 HOH A 65 365 78 HOH HOH . 
D 4 HOH A 66 366 49 HOH HOH . 
D 4 HOH A 67 367 15 HOH HOH . 
D 4 HOH A 68 368 3 HOH HOH . 
D 4 HOH A 69 369 59 HOH HOH . 
D 4 HOH A 70 370 74 HOH HOH . 
D 4 HOH A 71 371 69 HOH HOH . 
D 4 HOH A 72 372 82 HOH HOH . 
D 4 HOH A 73 373 58 HOH HOH . 
D 4 HOH A 74 374 20 HOH HOH . 
D 4 HOH A 75 375 7 HOH HOH . 
D 4 HOH A 76 376 25 HOH HOH . 
D 4 HOH A 77 377 88 HOH HOH . 
D 4 HOH A 78 378 9 HOH HOH . 
D 4 HOH A 79 379 61 HOH HOH . 
D 4 HOH A 80 380 57 HOH HOH . 
D 4 HOH A 81 381 71 HOH HOH . 
D 4 HOH A 82 382 87 HOH HOH . 
D 4 HOH A 83 383 75 HOH HOH . 
D 4 HOH A 84 384 47 HOH HOH . 
D 4 HOH A 85 385 70 HOH HOH . 
D 4 HOH A 86 386 10 HOH HOH . 
D 4 HOH A 87 387 76 HOH HOH . 
D 4 HOH A 88 388 2 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1A ACO . . . B 2 -10.042 -0.171 -2.065 1 27.69 ? N1A ACO 201 A 1 
HETATM 2 C C2A ACO . . . B 2 -11.238 -0.606 -2.461 1 30.03 ? C2A ACO 201 A 1 
HETATM 3 N N3A ACO . . . B 2 -12.421 0.015 -2.162 1 30.34 ? N3A ACO 201 A 1 
HETATM 4 C C4A ACO . . . B 2 -12.322 1.206 -1.469 1 29.24 ? C4A ACO 201 A 1 
HETATM 5 C C5A ACO . . . B 2 -11.041 1.73 -1.048 1 28 ? C5A ACO 201 A 1 
HETATM 6 C C6A ACO . . . B 2 -9.869 0.964 -1.352 1 29.1 ? C6A ACO 201 A 1 
HETATM 7 N N6A ACO . . . B 2 -8.646 1.425 -0.951 1 28.86 ? N6A ACO 201 A 1 
HETATM 8 N N7A ACO . . . B 2 -11.255 2.873 -0.338 1 29.13 ? N7A ACO 201 A 1 
HETATM 9 C C8A ACO . . . B 2 -12.561 3.079 -0.36 1 28.56 ? C8A ACO 201 A 1 
HETATM 10 N N9A ACO . . . B 2 -13.192 2.064 -0.993 1 27.82 ? N9A ACO 201 A 1 
HETATM 11 C C1B ACO . . . B 2 -14.622 1.935 -1.285 1 29.3 ? C1B ACO 201 A 1 
HETATM 12 C C2B ACO . . . B 2 -15.523 2.304 -0.149 1 30.22 ? C2B ACO 201 A 1 
HETATM 13 O O2B ACO . . . B 2 -15.754 1.232 0.741 1 29.65 ? O2B ACO 201 A 1 
HETATM 14 C C3B ACO . . . B 2 -16.772 2.682 -0.923 1 28.2 ? C3B ACO 201 A 1 
HETATM 15 O O3B ACO . . . B 2 -17.372 1.475 -1.37 1 33.81 ? O3B ACO 201 A 1 
HETATM 16 P P3B ACO . . . B 2 -19.032 1.363 -1.571 1 37.62 ? P3B ACO 201 A 1 
HETATM 17 O O7A ACO . . . B 2 -19.368 2.238 -2.716 1 42.25 ? O7A ACO 201 A 1 
HETATM 18 O O8A ACO . . . B 2 -19.089 -0.101 -1.852 1 37.6 ? O8A ACO 201 A 1 
HETATM 19 O O9A ACO . . . B 2 -19.463 1.778 -0.192 1 32.86 ? O9A ACO 201 A 1 
HETATM 20 C C4B ACO . . . B 2 -16.243 3.379 -2.164 1 28.92 ? C4B ACO 201 A 1 
HETATM 21 O O4B ACO . . . B 2 -14.966 2.787 -2.395 1 29.97 ? O4B ACO 201 A 1 
HETATM 22 C C5B ACO . . . B 2 -16.142 4.9 -2.063 1 26.2 ? C5B ACO 201 A 1 
HETATM 23 O O5B ACO . . . B 2 -15.297 5.16 -0.962 1 28.17 ? O5B ACO 201 A 1 
HETATM 24 P P1A ACO . . . B 2 -15.423 6.324 0.111 1 29.95 ? P1A ACO 201 A 1 
HETATM 25 O O1A ACO . . . B 2 -16.294 5.913 1.273 1 30.38 ? O1A ACO 201 A 1 
HETATM 26 O O2A ACO . . . B 2 -15.88 7.508 -0.681 1 28.17 ? O2A ACO 201 A 1 
HETATM 27 O O3A ACO . . . B 2 -13.95 6.425 0.596 1 26.4 ? O3A ACO 201 A 1 
HETATM 28 P P2A ACO . . . B 2 -13.125 7.348 1.544 1 30.3 ? P2A ACO 201 A 1 
HETATM 29 O O4A ACO . . . B 2 -12.481 6.566 2.593 1 30.58 ? O4A ACO 201 A 1 
HETATM 30 O O5A ACO . . . B 2 -14.067 8.503 1.883 1 29.43 ? O5A ACO 201 A 1 
HETATM 31 O O6A ACO . . . B 2 -12.029 7.953 0.484 1 30.89 ? O6A ACO 201 A 1 
HETATM 32 C CBP ACO . . . B 2 -9.683 7.696 0.139 1 31.03 ? CBP ACO 201 A 1 
HETATM 33 C CCP ACO . . . B 2 -11.055 7.13 -0.171 1 29.26 ? CCP ACO 201 A 1 
HETATM 34 C CDP ACO . . . B 2 -9.54 9.093 -0.383 1 32.51 ? CDP ACO 201 A 1 
HETATM 35 C CEP ACO . . . B 2 -8.617 6.793 -0.526 1 30.74 ? CEP ACO 201 A 1 
HETATM 36 C CAP ACO . . . B 2 -9.457 7.733 1.626 1 28.91 ? CAP ACO 201 A 1 
HETATM 37 O OAP ACO . . . B 2 -9.631 6.418 2.188 1 32.82 ? OAP ACO 201 A 1 
HETATM 38 C C9P ACO . . . B 2 -8.102 8.191 1.997 1 30.91 ? C9P ACO 201 A 1 
HETATM 39 O O9P ACO . . . B 2 -7.842 9.354 2.191 1 28.33 ? O9P ACO 201 A 1 
HETATM 40 N N8P ACO . . . B 2 -7.097 7.288 2.075 1 29.24 ? N8P ACO 201 A 1 
HETATM 41 C C7P ACO . . . B 2 -5.828 7.808 2.392 1 26.97 ? C7P ACO 201 A 1 
HETATM 42 C C6P ACO . . . B 2 -5.099 8.693 1.401 1 29.99 ? C6P ACO 201 A 1 
HETATM 43 C C5P ACO . . . B 2 -5.157 8.134 -0.018 1 37 ? C5P ACO 201 A 1 
HETATM 44 O O5P ACO . . . B 2 -4.951 6.966 -0.365 1 32.27 ? O5P ACO 201 A 1 
HETATM 45 N N4P ACO . . . B 2 -5.495 9.037 -0.923 1 31.51 ? N4P ACO 201 A 1 
HETATM 46 C C3P ACO . . . B 2 -5.625 8.705 -2.355 1 30 ? C3P ACO 201 A 1 
HETATM 47 C C2P ACO . . . B 2 -4.321 9.122 -3.004 1 28.89 ? C2P ACO 201 A 1 
HETATM 48 S S1P ACO . . . B 2 -4.443 8.786 -4.777 1 31.69 ? S1P ACO 201 A 1 
HETATM 49 C C ACO . . . B 2 -4.781 10.368 -5.293 1 32.26 ? C ACO 201 A 1 
HETATM 50 O O ACO . . . B 2 -4.885 11.339 -4.52 1 28.75 ? O ACO 201 A 1 
HETATM 51 C CH3 ACO . . . B 2 -5.005 10.564 -6.75 1 29.08 ? CH3 ACO 201 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           51 
#