data_6TE5 # _model_server_result.job_id QjQeQwDeKfp_ocSubwXNKw _model_server_result.datetime_utc '2025-02-05 18:02:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6te5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 6TE5 # _exptl.entry_id 6TE5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TE5 _cell.length_a 81.184 _cell.length_b 89.338 _cell.length_c 159.208 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TE5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 204 A LYS 204 1_555 C O2B NAD . A NAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale2 C N7N NAD . A NAD 601 3_555 B CG ASP 363 B ASP 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.406 ? covale ? covale3 C C7N NAD . A NAD 601 3_555 B OD1 ASP 363 B ASP 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 300 n n PA O2A NAD sing 301 n n PA O5B NAD sing 302 n n PA O3 NAD sing 303 n n O2A HOA2 NAD sing 304 n n O5B C5B NAD sing 305 n n C5B C4B NAD sing 306 n n C5B H51A NAD sing 307 n n C5B H52A NAD sing 308 n n C4B O4B NAD sing 309 n n C4B C3B NAD sing 310 n n C4B H4B NAD sing 311 n n O4B C1B NAD sing 312 n n C3B O3B NAD sing 313 n n C3B C2B NAD sing 314 n n C3B H3B NAD sing 315 n n O3B HO3A NAD sing 316 n n C2B O2B NAD sing 317 n n C2B C1B NAD sing 318 n n C2B H2B NAD sing 319 n n O2B HO2A NAD sing 320 n n C1B N9A NAD sing 321 n n C1B H1B NAD sing 322 n n N9A C8A NAD sing 323 n y N9A C4A NAD sing 324 n y C8A N7A NAD doub 325 n y C8A H8A NAD sing 326 n n N7A C5A NAD sing 327 n y C5A C6A NAD sing 328 n y C5A C4A NAD doub 329 n y C6A N6A NAD sing 330 n n C6A N1A NAD doub 331 n y N6A H61A NAD sing 332 n n N6A H62A NAD sing 333 n n N1A C2A NAD sing 334 n y C2A N3A NAD doub 335 n y C2A H2A NAD sing 336 n n N3A C4A NAD sing 337 n y O3 PN NAD sing 338 n n PN O1N NAD doub 339 n n PN O2N NAD sing 340 n n PN O5D NAD sing 341 n n O5D C5D NAD sing 342 n n C5D C4D NAD sing 343 n n C5D H51N NAD sing 344 n n C5D H52N NAD sing 345 n n C4D O4D NAD sing 346 n n C4D C3D NAD sing 347 n n C4D H4D NAD sing 348 n n O4D C1D NAD sing 349 n n C3D O3D NAD sing 350 n n C3D C2D NAD sing 351 n n C3D H3D NAD sing 352 n n O3D HO3N NAD sing 353 n n C2D O2D NAD sing 354 n n C2D C1D NAD sing 355 n n C2D H2D NAD sing 356 n n O2D HO2N NAD sing 357 n n C1D N1N NAD sing 358 n n C1D H1D NAD sing 359 n n N1N C2N NAD sing 360 n y N1N C6N NAD doub 361 n y C2N C3N NAD doub 362 n y C2N H2N NAD sing 363 n n C3N C7N NAD sing 364 n n C3N C4N NAD sing 365 n y C7N O7N NAD doub 366 n n C7N N7N NAD sing 367 n n N7N H71N NAD sing 368 n n N7N H72N NAD sing 369 n n C4N C5N NAD doub 370 n y C4N H4N NAD sing 371 n n C5N C6N NAD sing 372 n y C5N H5N NAD sing 373 n n C6N H6N NAD sing 374 n n # _atom_sites.entry_id 6TE5 _atom_sites.fract_transf_matrix[1][1] 0.012318 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011193 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006281 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 601 601 NAD NAD . D 3 N4Q A 1 602 801 N4Q LQ4 . E 4 GOL A 1 603 601 GOL GOL . F 2 NAD B 1 701 701 NAD NAD . G 3 N4Q B 1 702 801 N4Q LQ4 . H 5 HOH A 1 701 26 HOH HOH . H 5 HOH A 2 702 4 HOH HOH . H 5 HOH A 3 703 1 HOH HOH . H 5 HOH A 4 704 5 HOH HOH . H 5 HOH A 5 705 14 HOH HOH . H 5 HOH A 6 706 7 HOH HOH . H 5 HOH A 7 707 13 HOH HOH . I 5 HOH B 1 801 22 HOH HOH . I 5 HOH B 2 802 24 HOH HOH . I 5 HOH B 3 803 17 HOH HOH . I 5 HOH B 4 804 16 HOH HOH . I 5 HOH B 5 805 9 HOH HOH . I 5 HOH B 6 806 6 HOH HOH . I 5 HOH B 7 807 3 HOH HOH . I 5 HOH B 8 808 15 HOH HOH . I 5 HOH B 9 809 10 HOH HOH . I 5 HOH B 10 810 2 HOH HOH . I 5 HOH B 11 811 12 HOH HOH . I 5 HOH B 12 812 25 HOH HOH . I 5 HOH B 13 813 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . C 2 23.413 16.765 29.726 1 57.14 ? PA NAD 601 A 1 HETATM 2 O O1A NAD . . . C 2 24.846 16.428 29.733 1 51.02 ? O1A NAD 601 A 1 HETATM 3 O O2A NAD . . . C 2 22.833 17.311 30.959 1 66.11 ? O2A NAD 601 A 1 HETATM 4 O O5B NAD . . . C 2 22.567 15.512 29.319 1 51.68 ? O5B NAD 601 A 1 HETATM 5 C C5B NAD . . . C 2 22.844 14.828 28.112 1 50.53 ? C5B NAD 601 A 1 HETATM 6 C C4B NAD . . . C 2 22.132 13.513 28.198 1 48.54 ? C4B NAD 601 A 1 HETATM 7 O O4B NAD . . . C 2 22.897 12.674 29.067 1 44.78 ? O4B NAD 601 A 1 HETATM 8 C C3B NAD . . . C 2 20.751 13.583 28.829 1 50.66 ? C3B NAD 601 A 1 HETATM 9 O O3B NAD . . . C 2 19.887 13.397 27.726 1 52.19 ? O3B NAD 601 A 1 HETATM 10 C C2B NAD . . . C 2 20.695 12.425 29.82 1 46.71 ? C2B NAD 601 A 1 HETATM 11 O O2B NAD . . . C 2 19.624 11.541 29.576 1 53.55 ? O2B NAD 601 A 1 HETATM 12 C C1B NAD . . . C 2 22.074 11.787 29.757 1 47.31 ? C1B NAD 601 A 1 HETATM 13 N N9A NAD . . . C 2 22.721 11.741 31.051 1 49.17 ? N9A NAD 601 A 1 HETATM 14 C C8A NAD . . . C 2 22.675 12.74 31.975 1 50.2 ? C8A NAD 601 A 1 HETATM 15 N N7A NAD . . . C 2 23.374 12.487 33.042 1 51.33 ? N7A NAD 601 A 1 HETATM 16 C C5A NAD . . . C 2 23.919 11.242 32.804 1 48.29 ? C5A NAD 601 A 1 HETATM 17 C C6A NAD . . . C 2 24.757 10.418 33.567 1 48.45 ? C6A NAD 601 A 1 HETATM 18 N N6A NAD . . . C 2 25.217 10.741 34.765 1 53.45 ? N6A NAD 601 A 1 HETATM 19 N N1A NAD . . . C 2 25.128 9.24 33.036 1 48.21 ? N1A NAD 601 A 1 HETATM 20 C C2A NAD . . . C 2 24.668 8.921 31.826 1 51.99 ? C2A NAD 601 A 1 HETATM 21 N N3A NAD . . . C 2 23.875 9.614 31.022 1 51.45 ? N3A NAD 601 A 1 HETATM 22 C C4A NAD . . . C 2 23.534 10.778 31.573 1 50.78 ? C4A NAD 601 A 1 HETATM 23 O O3 NAD . . . C 2 23.11 17.72 28.525 1 59.34 ? O3 NAD 601 A 1 HETATM 24 P PN NAD . . . C 2 21.965 18.787 28.388 1 80.05 ? PN NAD 601 A 1 HETATM 25 O O1N NAD . . . C 2 20.69 18.058 28.274 1 68.27 ? O1N NAD 601 A 1 HETATM 26 O O2N NAD . . . C 2 22.335 19.748 27.325 1 65.36 ? O2N NAD 601 A 1 HETATM 27 O O5D NAD . . . C 2 22.087 19.468 29.824 1 79.33 ? O5D NAD 601 A 1 HETATM 28 C C5D NAD . . . C 2 21.056 20.334 30.352 1 81.37 ? C5D NAD 601 A 1 HETATM 29 C C4D NAD . . . C 2 21.263 20.485 31.838 1 101.22 ? C4D NAD 601 A 1 HETATM 30 O O4D NAD . . . C 2 19.98 20.659 32.484 1 110.3 ? O4D NAD 601 A 1 HETATM 31 C C3D NAD . . . C 2 21.858 19.261 32.528 1 105.05 ? C3D NAD 601 A 1 HETATM 32 O O3D NAD . . . C 2 22.596 19.656 33.674 1 113.36 ? O3D NAD 601 A 1 HETATM 33 C C2D NAD . . . C 2 20.558 18.537 32.884 1 111.17 ? C2D NAD 601 A 1 HETATM 34 O O2D NAD . . . C 2 20.644 17.37 33.685 1 115.29 ? O2D NAD 601 A 1 HETATM 35 C C1D NAD . . . C 2 19.836 19.704 33.535 1 110.37 ? C1D NAD 601 A 1 HETATM 36 N N1N NAD . . . C 2 18.389 19.4 33.735 1 111.9 ? N1N NAD 601 A 1 HETATM 37 C C2N NAD . . . C 2 17.995 18.317 34.499 1 114.86 ? C2N NAD 601 A 1 HETATM 38 C C3N NAD . . . C 2 16.64 18.054 34.711 1 112.35 ? C3N NAD 601 A 1 HETATM 39 C C7N NAD . . . C 2 16.196 17.059 35.755 1 112.4 ? C7N NAD 601 A 1 HETATM 40 O O7N NAD . . . C 2 17.032 16.383 36.345 1 108.09 ? O7N NAD 601 A 1 HETATM 41 N N7N NAD . . . C 2 14.903 16.983 36.02 1 119.14 ? N7N NAD 601 A 1 HETATM 42 C C4N NAD . . . C 2 15.709 18.732 33.95 1 105.82 ? C4N NAD 601 A 1 HETATM 43 C C5N NAD . . . C 2 16.111 19.805 33.191 1 103.65 ? C5N NAD 601 A 1 HETATM 44 C C6N NAD . . . C 2 17.443 20.16 33.149 1 107.1 ? C6N NAD 601 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 44 #