data_6TFU # _model_server_result.job_id Xv2bHJjcxr5HdbCnpU5PXg _model_server_result.datetime_utc '2024-11-15 03:59:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tfu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1101}' # _entry.id 6TFU # _exptl.entry_id 6TFU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 487.555 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[3-[4-[[1-(phenylmethyl)indazol-5-yl]amino]-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]phenyl]propanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TFU _cell.length_a 76.43 _cell.length_b 81.22 _cell.length_c 89.92 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TFU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 108 A CYS 797 1_555 C CBJ N7K . A N7K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.819 ? covale ? covale2 B SG CYS 108 B CYS 797 1_555 F CBJ N7K . B N7K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.817 ? # _chem_comp.formula 'C29 H25 N7 O' _chem_comp.formula_weight 487.555 _chem_comp.id N7K _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[3-[4-[[1-(phenylmethyl)indazol-5-yl]amino]-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]phenyl]propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CBJ CBI N7K sing 237 n n CBI CAT N7K sing 238 n n CAZ CAY N7K doub 239 n y CAZ CAU N7K sing 240 n y OBK CAT N7K doub 241 n n CAY CAX N7K sing 242 n y CAT NAD N7K sing 243 n n CAU CAV N7K doub 244 n y CAX CAW N7K doub 245 n y NAD CAP N7K sing 246 n n CAV CAW N7K sing 247 n y CAV CBA N7K sing 248 n n CAO CAP N7K doub 249 n y CAO CAN N7K sing 250 n y CBF CBE N7K doub 251 n y CBF CBG N7K sing 252 n y CAP CAQ N7K sing 253 n y CBE CBB N7K sing 254 n y NAC C4 N7K sing 255 n y NAC CAL N7K sing 256 n y N3 C4 N7K doub 257 n y N3 C2 N7K sing 258 n y C4 C5 N7K sing 259 n y CAL CAM N7K doub 260 n y C2 N1 N7K doub 261 n y CBA NAE N7K sing 262 n n CAM C5 N7K sing 263 n y CAM CAN N7K sing 264 n n C5 C6 N7K doub 265 n y N1 C6 N7K sing 266 n y C6 NAG N7K sing 267 n n CAN CAS N7K doub 268 n y NAG CBG N7K sing 269 n n CBG CBH N7K doub 270 n y CBB NAE N7K sing 271 n y CBB CBC N7K doub 272 n y CAQ CAR N7K doub 273 n y NAE NAF N7K sing 274 n y CAS CAR N7K sing 275 n y CBH CBC N7K sing 276 n y CBC CBD N7K sing 277 n y NAF CBD N7K doub 278 n y C2 H1 N7K sing 279 n n CAL H2 N7K sing 280 n n CAO H3 N7K sing 281 n n CAQ H4 N7K sing 282 n n CAR H5 N7K sing 283 n n CAS H6 N7K sing 284 n n CAU H7 N7K sing 285 n n CAW H8 N7K sing 286 n n CAX H9 N7K sing 287 n n CAY H10 N7K sing 288 n n CAZ H11 N7K sing 289 n n CBA H12 N7K sing 290 n n CBA H13 N7K sing 291 n n CBD H14 N7K sing 292 n n CBE H15 N7K sing 293 n n CBF H16 N7K sing 294 n n CBH H17 N7K sing 295 n n CBI H18 N7K sing 296 n n CBI H19 N7K sing 297 n n CBJ H20 N7K sing 298 n n CBJ H21 N7K sing 299 n n CBJ H22 N7K sing 300 n n NAC H23 N7K sing 301 n n NAD H24 N7K sing 302 n n NAG H25 N7K sing 303 n n # _atom_sites.entry_id 6TFU _atom_sites.fract_transf_matrix[1][1] 0.013084 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012312 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011121 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 N7K A 1 1101 1001 N7K DRG . D 3 SO4 A 1 1102 2 SO4 SO4 . E 3 SO4 A 1 1103 3 SO4 SO4 . F 2 N7K B 1 1101 1001 N7K DRG . G 3 SO4 B 1 1102 1 SO4 SO4 . H 3 SO4 B 1 1103 4 SO4 SO4 . I 4 HOH A 1 1201 123 HOH HOH . I 4 HOH A 2 1202 8 HOH HOH . I 4 HOH A 3 1203 17 HOH HOH . I 4 HOH A 4 1204 46 HOH HOH . I 4 HOH A 5 1205 18 HOH HOH . I 4 HOH A 6 1206 6 HOH HOH . I 4 HOH A 7 1207 3 HOH HOH . I 4 HOH A 8 1208 72 HOH HOH . I 4 HOH A 9 1209 33 HOH HOH . I 4 HOH A 10 1210 22 HOH HOH . I 4 HOH A 11 1211 42 HOH HOH . I 4 HOH A 12 1212 7 HOH HOH . I 4 HOH A 13 1213 124 HOH HOH . I 4 HOH A 14 1214 23 HOH HOH . I 4 HOH A 15 1215 44 HOH HOH . I 4 HOH A 16 1216 21 HOH HOH . I 4 HOH A 17 1217 83 HOH HOH . I 4 HOH A 18 1218 15 HOH HOH . I 4 HOH A 19 1219 112 HOH HOH . I 4 HOH A 20 1220 19 HOH HOH . I 4 HOH A 21 1221 24 HOH HOH . I 4 HOH A 22 1222 55 HOH HOH . I 4 HOH A 23 1223 126 HOH HOH . I 4 HOH A 24 1224 67 HOH HOH . I 4 HOH A 25 1225 119 HOH HOH . I 4 HOH A 26 1226 127 HOH HOH . I 4 HOH A 27 1227 2 HOH HOH . I 4 HOH A 28 1228 40 HOH HOH . I 4 HOH A 29 1229 120 HOH HOH . I 4 HOH A 30 1230 109 HOH HOH . I 4 HOH A 31 1231 98 HOH HOH . I 4 HOH A 32 1232 114 HOH HOH . I 4 HOH A 33 1233 14 HOH HOH . I 4 HOH A 34 1234 16 HOH HOH . I 4 HOH A 35 1235 89 HOH HOH . I 4 HOH A 36 1236 92 HOH HOH . I 4 HOH A 37 1237 110 HOH HOH . J 4 HOH B 1 1201 103 HOH HOH . J 4 HOH B 2 1202 1 HOH HOH . J 4 HOH B 3 1203 62 HOH HOH . J 4 HOH B 4 1204 66 HOH HOH . J 4 HOH B 5 1205 63 HOH HOH . J 4 HOH B 6 1206 38 HOH HOH . J 4 HOH B 7 1207 77 HOH HOH . J 4 HOH B 8 1208 27 HOH HOH . J 4 HOH B 9 1209 43 HOH HOH . J 4 HOH B 10 1210 54 HOH HOH . J 4 HOH B 11 1211 28 HOH HOH . J 4 HOH B 12 1212 39 HOH HOH . J 4 HOH B 13 1213 5 HOH HOH . J 4 HOH B 14 1214 35 HOH HOH . J 4 HOH B 15 1215 104 HOH HOH . J 4 HOH B 16 1216 61 HOH HOH . J 4 HOH B 17 1217 101 HOH HOH . J 4 HOH B 18 1218 11 HOH HOH . J 4 HOH B 19 1219 34 HOH HOH . J 4 HOH B 20 1220 36 HOH HOH . J 4 HOH B 21 1221 125 HOH HOH . J 4 HOH B 22 1222 30 HOH HOH . J 4 HOH B 23 1223 31 HOH HOH . J 4 HOH B 24 1224 108 HOH HOH . J 4 HOH B 25 1225 97 HOH HOH . J 4 HOH B 26 1226 78 HOH HOH . J 4 HOH B 27 1227 41 HOH HOH . J 4 HOH B 28 1228 82 HOH HOH . J 4 HOH B 29 1229 29 HOH HOH . J 4 HOH B 30 1230 4 HOH HOH . J 4 HOH B 31 1231 32 HOH HOH . J 4 HOH B 32 1232 91 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 N7K . . . C 2 -42.2 11.708 -1.718 1 45.86 ? C4 N7K 1101 A 1 HETATM 2 C C5 N7K . . . C 2 -43.393 11.096 -1.529 1 43.86 ? C5 N7K 1101 A 1 HETATM 3 C C6 N7K . . . C 2 -43.42 9.744 -1.408 1 42.35 ? C6 N7K 1101 A 1 HETATM 4 N N1 N7K . . . C 2 -42.278 9.035 -1.474 1 46.18 ? N1 N7K 1101 A 1 HETATM 5 N N3 N7K . . . C 2 -41.051 11.032 -1.782 1 46.13 ? N3 N7K 1101 A 1 HETATM 6 C C2 N7K . . . C 2 -41.053 9.657 -1.661 1 41.41 ? C2 N7K 1101 A 1 HETATM 7 C CAL N7K . . . C 2 -43.669 13.27 -1.696 1 46.9 ? CAL N7K 1101 A 1 HETATM 8 C CAM N7K . . . C 2 -44.295 12.108 -1.522 1 43.59 ? CAM N7K 1101 A 1 HETATM 9 C CAN N7K . . . C 2 -45.63 12.116 -1.371 1 46.51 ? CAN N7K 1101 A 1 HETATM 10 C CAO N7K . . . C 2 -46.403 12.889 -2.243 1 45.74 ? CAO N7K 1101 A 1 HETATM 11 C CAP N7K . . . C 2 -47.792 12.954 -2.116 1 48.86 ? CAP N7K 1101 A 1 HETATM 12 C CAQ N7K . . . C 2 -48.423 12.251 -1.098 1 44.3 ? CAQ N7K 1101 A 1 HETATM 13 C CAR N7K . . . C 2 -47.663 11.496 -0.213 1 47.68 ? CAR N7K 1101 A 1 HETATM 14 C CAS N7K . . . C 2 -46.273 11.436 -0.341 1 47.72 ? CAS N7K 1101 A 1 HETATM 15 C CAT N7K . . . C 2 -49.177 13.008 -3.939 1 52.36 ? CAT N7K 1101 A 1 HETATM 16 C CAU N7K . . . C 2 -44.259 1.011 -3.305 1 47.46 ? CAU N7K 1101 A 1 HETATM 17 C CAV N7K . . . C 2 -43.904 1.971 -2.358 1 48.94 ? CAV N7K 1101 A 1 HETATM 18 C CAW N7K . . . C 2 -42.572 2.366 -2.264 1 50.79 ? CAW N7K 1101 A 1 HETATM 19 C CAX N7K . . . C 2 -41.603 1.811 -3.1 1 45.42 ? CAX N7K 1101 A 1 HETATM 20 C CAY N7K . . . C 2 -41.963 0.854 -4.041 1 45.52 ? CAY N7K 1101 A 1 HETATM 21 C CAZ N7K . . . C 2 -43.294 0.456 -4.142 1 51.31 ? CAZ N7K 1101 A 1 HETATM 22 C CBA N7K . . . C 2 -44.895 2.517 -1.522 1 46.51 ? CBA N7K 1101 A 1 HETATM 23 C CBB N7K . . . C 2 -44.575 4.976 -1.076 1 47.63 ? CBB N7K 1101 A 1 HETATM 24 C CBC N7K . . . C 2 -43.958 5.703 -0.143 1 49.4 ? CBC N7K 1101 A 1 HETATM 25 C CBD N7K . . . C 2 -43.414 4.839 0.712 1 48.33 ? CBD N7K 1101 A 1 HETATM 26 C CBE N7K . . . C 2 -45.216 5.584 -2.081 1 45.28 ? CBE N7K 1101 A 1 HETATM 27 C CBF N7K . . . C 2 -45.251 6.98 -2.164 1 49.75 ? CBF N7K 1101 A 1 HETATM 28 C CBG N7K . . . C 2 -44.604 7.744 -1.189 1 46.62 ? CBG N7K 1101 A 1 HETATM 29 C CBH N7K . . . C 2 -43.965 7.038 -0.169 1 48.3 ? CBH N7K 1101 A 1 HETATM 30 C CBI N7K . . . C 2 -50.02 13.855 -4.891 1 48.23 ? CBI N7K 1101 A 1 HETATM 31 C CBJ N7K . . . C 2 -49.688 13.43 -6.325 1 47.41 ? CBJ N7K 1101 A 1 HETATM 32 N NAC N7K . . . C 2 -42.369 13.019 -1.816 1 44.4 ? NAC N7K 1101 A 1 HETATM 33 N NAD N7K . . . C 2 -48.533 13.676 -2.963 1 49.9 ? NAD N7K 1101 A 1 HETATM 34 N NAE N7K . . . C 2 -44.382 3.685 -0.76 1 48.59 ? NAE N7K 1101 A 1 HETATM 35 N NAF N7K . . . C 2 -43.706 3.604 0.296 1 45.8 ? NAF N7K 1101 A 1 HETATM 36 N NAG N7K . . . C 2 -44.6 9.105 -1.223 1 38.92 ? NAG N7K 1101 A 1 HETATM 37 O OBK N7K . . . C 2 -49.085 11.793 -4.111 1 54.89 ? OBK N7K 1101 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 37 #