data_6THZ
#
_model_server_result.job_id            si8t7Oy53lcnMKMfFgOpJg 
_model_server_result.datetime_utc      '2024-11-22 22:15:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6thz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":501}' 
#
_entry.id    6THZ 
#
_exptl.entry_id    6THZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              501.559 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            7-fluoranyl-~{N}-[1-(2-methyl-2-azaspiro[3.3]heptan-6-yl)pyrazol-4-yl]-4-(1-methylcyclopropyl)oxy-6-(2-methylpyrimidin-5-yl)pyrido[3,2-d]pyrimidin-2-amine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6THZ 
_cell.length_a            85.93 
_cell.length_b            108.57 
_cell.length_c            142.19 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6THZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C MET 192 A MET 344 1_555 A N TPO 193 A TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? 
covale ? covale2 A C TPO 193 A TPO 345 1_555 A N SEP 194 A SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? 
covale ? covale3 A C SEP 194 A SEP 346 1_555 A N ARG 195 A ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? 
covale ? covale4 B C MET 192 B MET 344 1_555 B N TPO 193 B TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? 
covale ? covale5 B C TPO 193 B TPO 345 1_555 B N SEP 194 B SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? 
covale ? covale6 B C SEP 194 B SEP 346 1_555 B N ARG 195 B ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? 
#
_chem_comp.formula           'C26 H28 F N9 O' 
_chem_comp.formula_weight    501.559 
_chem_comp.id                NB5 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              7-fluoranyl-~{N}-[1-(2-methyl-2-azaspiro[3.3]heptan-6-yl)pyrazol-4-yl]-4-(1-methylcyclopropyl)oxy-6-(2-methylpyrimidin-5-yl)pyrido[3,2-d]pyrimidin-2-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C24 C13 NB5 sing 237 n n 
C13 N28 NB5 doub 238 n y 
C13 N27 NB5 sing 239 n y 
N28 C3 NB5 sing 240 n y 
C15 C23 NB5 sing 241 n n 
C15 C16 NB5 sing 242 n n 
N27 C2 NB5 doub 243 n y 
C3 C6 NB5 doub 244 n y 
C25 C23 NB5 sing 245 n n 
C23 C16 NB5 sing 246 n n 
C23 O36 NB5 sing 247 n n 
C2 C6 NB5 sing 248 n y 
O36 C12 NB5 sing 249 n n 
C6 C11 NB5 sing 250 n n 
N30 C11 NB5 doub 251 n y 
N30 C8 NB5 sing 252 n y 
C11 C10 NB5 sing 253 n y 
C12 C8 NB5 doub 254 n y 
C12 N32 NB5 sing 255 n y 
C8 C7 NB5 sing 256 n y 
N32 C14 NB5 doub 257 n y 
C10 F37 NB5 sing 258 n n 
C10 C1 NB5 doub 259 n y 
C4 N29 NB5 doub 260 n y 
C4 C9 NB5 sing 261 n y 
N29 N33 NB5 sing 262 n y 
C7 C1 NB5 sing 263 n y 
C7 N31 NB5 doub 264 n y 
C14 N31 NB5 sing 265 n y 
C14 N35 NB5 sing 266 n n 
C9 N35 NB5 sing 267 n n 
C9 C5 NB5 doub 268 n y 
N33 C21 NB5 sing 269 n n 
N33 C5 NB5 sing 270 n y 
C21 C17 NB5 sing 271 n n 
C21 C18 NB5 sing 272 n n 
C17 C22 NB5 sing 273 n n 
C18 C22 NB5 sing 274 n n 
C19 C22 NB5 sing 275 n n 
C19 N34 NB5 sing 276 n n 
C22 C20 NB5 sing 277 n n 
N34 C20 NB5 sing 278 n n 
N34 C26 NB5 sing 279 n n 
C1 H1 NB5 sing 280 n n 
C2 H2 NB5 sing 281 n n 
C3 H3 NB5 sing 282 n n 
C15 H4 NB5 sing 283 n n 
C15 H5 NB5 sing 284 n n 
C16 H6 NB5 sing 285 n n 
C16 H7 NB5 sing 286 n n 
C19 H8 NB5 sing 287 n n 
C19 H9 NB5 sing 288 n n 
C20 H10 NB5 sing 289 n n 
C20 H11 NB5 sing 290 n n 
C21 H12 NB5 sing 291 n n 
C24 H13 NB5 sing 292 n n 
C24 H14 NB5 sing 293 n n 
C24 H15 NB5 sing 294 n n 
C4 H16 NB5 sing 295 n n 
C5 H17 NB5 sing 296 n n 
C17 H18 NB5 sing 297 n n 
C17 H19 NB5 sing 298 n n 
C18 H20 NB5 sing 299 n n 
C18 H21 NB5 sing 300 n n 
C25 H22 NB5 sing 301 n n 
C25 H23 NB5 sing 302 n n 
C25 H24 NB5 sing 303 n n 
C26 H25 NB5 sing 304 n n 
C26 H26 NB5 sing 305 n n 
C26 H27 NB5 sing 306 n n 
N35 H29 NB5 sing 307 n n 
#
_atom_sites.entry_id                     6THZ 
_atom_sites.fract_transf_matrix[1][1]    0.011637 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009211 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007033 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NB5 A 1 501 1 NB5 INH . 
D 2 NB5 B 1 501 2 NB5 INH . 
E 3 HOH A 1 601 1 HOH HOH . 
E 3 HOH A 2 602 6 HOH HOH . 
E 3 HOH A 3 603 64 HOH HOH . 
E 3 HOH A 4 604 93 HOH HOH . 
E 3 HOH A 5 605 4 HOH HOH . 
E 3 HOH A 6 606 10 HOH HOH . 
E 3 HOH A 7 607 23 HOH HOH . 
E 3 HOH A 8 608 68 HOH HOH . 
E 3 HOH A 9 609 17 HOH HOH . 
E 3 HOH A 10 610 35 HOH HOH . 
E 3 HOH A 11 611 5 HOH HOH . 
E 3 HOH A 12 612 7 HOH HOH . 
E 3 HOH A 13 613 97 HOH HOH . 
E 3 HOH A 14 614 40 HOH HOH . 
E 3 HOH A 15 615 89 HOH HOH . 
E 3 HOH A 16 616 38 HOH HOH . 
E 3 HOH A 17 617 43 HOH HOH . 
E 3 HOH A 18 618 57 HOH HOH . 
E 3 HOH A 19 619 32 HOH HOH . 
E 3 HOH A 20 620 102 HOH HOH . 
E 3 HOH A 21 621 78 HOH HOH . 
E 3 HOH A 22 622 15 HOH HOH . 
E 3 HOH A 23 623 22 HOH HOH . 
E 3 HOH A 24 624 50 HOH HOH . 
E 3 HOH A 25 625 30 HOH HOH . 
E 3 HOH A 26 626 45 HOH HOH . 
E 3 HOH A 27 627 81 HOH HOH . 
E 3 HOH A 28 628 94 HOH HOH . 
E 3 HOH A 29 629 20 HOH HOH . 
E 3 HOH A 30 630 69 HOH HOH . 
E 3 HOH A 31 631 67 HOH HOH . 
E 3 HOH A 32 632 103 HOH HOH . 
E 3 HOH A 33 633 34 HOH HOH . 
E 3 HOH A 34 634 86 HOH HOH . 
E 3 HOH A 35 635 74 HOH HOH . 
E 3 HOH A 36 636 90 HOH HOH . 
E 3 HOH A 37 637 101 HOH HOH . 
E 3 HOH A 38 638 47 HOH HOH . 
E 3 HOH A 39 639 25 HOH HOH . 
E 3 HOH A 40 640 36 HOH HOH . 
E 3 HOH A 41 641 52 HOH HOH . 
E 3 HOH A 42 642 77 HOH HOH . 
E 3 HOH A 43 643 71 HOH HOH . 
E 3 HOH A 44 644 87 HOH HOH . 
E 3 HOH A 45 645 79 HOH HOH . 
E 3 HOH A 46 646 95 HOH HOH . 
E 3 HOH A 47 647 46 HOH HOH . 
E 3 HOH A 48 648 107 HOH HOH . 
E 3 HOH A 49 649 84 HOH HOH . 
E 3 HOH A 50 650 92 HOH HOH . 
F 3 HOH B 1 601 109 HOH HOH . 
F 3 HOH B 2 602 61 HOH HOH . 
F 3 HOH B 3 603 12 HOH HOH . 
F 3 HOH B 4 604 8 HOH HOH . 
F 3 HOH B 5 605 55 HOH HOH . 
F 3 HOH B 6 606 83 HOH HOH . 
F 3 HOH B 7 607 9 HOH HOH . 
F 3 HOH B 8 608 59 HOH HOH . 
F 3 HOH B 9 609 48 HOH HOH . 
F 3 HOH B 10 610 54 HOH HOH . 
F 3 HOH B 11 611 18 HOH HOH . 
F 3 HOH B 12 612 3 HOH HOH . 
F 3 HOH B 13 613 11 HOH HOH . 
F 3 HOH B 14 614 99 HOH HOH . 
F 3 HOH B 15 615 39 HOH HOH . 
F 3 HOH B 16 616 49 HOH HOH . 
F 3 HOH B 17 617 27 HOH HOH . 
F 3 HOH B 18 618 13 HOH HOH . 
F 3 HOH B 19 619 19 HOH HOH . 
F 3 HOH B 20 620 16 HOH HOH . 
F 3 HOH B 21 621 44 HOH HOH . 
F 3 HOH B 22 622 85 HOH HOH . 
F 3 HOH B 23 623 62 HOH HOH . 
F 3 HOH B 24 624 14 HOH HOH . 
F 3 HOH B 25 625 73 HOH HOH . 
F 3 HOH B 26 626 82 HOH HOH . 
F 3 HOH B 27 627 110 HOH HOH . 
F 3 HOH B 28 628 29 HOH HOH . 
F 3 HOH B 29 629 31 HOH HOH . 
F 3 HOH B 30 630 41 HOH HOH . 
F 3 HOH B 31 631 2 HOH HOH . 
F 3 HOH B 32 632 72 HOH HOH . 
F 3 HOH B 33 633 65 HOH HOH . 
F 3 HOH B 34 634 37 HOH HOH . 
F 3 HOH B 35 635 76 HOH HOH . 
F 3 HOH B 36 636 56 HOH HOH . 
F 3 HOH B 37 637 60 HOH HOH . 
F 3 HOH B 38 638 70 HOH HOH . 
F 3 HOH B 39 639 33 HOH HOH . 
F 3 HOH B 40 640 42 HOH HOH . 
F 3 HOH B 41 641 26 HOH HOH . 
F 3 HOH B 42 642 106 HOH HOH . 
F 3 HOH B 43 643 98 HOH HOH . 
F 3 HOH B 44 644 80 HOH HOH . 
F 3 HOH B 45 645 96 HOH HOH . 
F 3 HOH B 46 646 24 HOH HOH . 
F 3 HOH B 47 647 58 HOH HOH . 
F 3 HOH B 48 648 66 HOH HOH . 
F 3 HOH B 49 649 91 HOH HOH . 
F 3 HOH B 50 650 100 HOH HOH . 
F 3 HOH B 51 651 21 HOH HOH . 
F 3 HOH B 52 652 75 HOH HOH . 
F 3 HOH B 53 653 28 HOH HOH . 
F 3 HOH B 54 654 88 HOH HOH . 
F 3 HOH B 55 655 51 HOH HOH . 
F 3 HOH B 56 656 63 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NB5 . . . D 2 -54.426 -17.561 -7.16 1 34.79 ? C1 NB5 501 B 1 
HETATM 2 C C2 NB5 . . . D 2 -57.472 -17.807 -10.468 1 46.62 ? C2 NB5 501 B 1 
HETATM 3 C C3 NB5 . . . D 2 -56.241 -16.084 -11.406 1 41.47 ? C3 NB5 501 B 1 
HETATM 4 C C7 NB5 . . . D 2 -53.135 -17.485 -7.647 1 38.6 ? C7 NB5 501 B 1 
HETATM 5 C C8 NB5 . . . D 2 -52.995 -17.299 -9.021 1 39.98 ? C8 NB5 501 B 1 
HETATM 6 C C9 NB5 . . . D 2 -48.469 -17.782 -6.975 1 34.2 ? C9 NB5 501 B 1 
HETATM 7 C C10 NB5 . . . D 2 -55.493 -17.441 -8.033 1 38.61 ? C10 NB5 501 B 1 
HETATM 8 C C11 NB5 . . . D 2 -55.272 -17.238 -9.398 1 39.96 ? C11 NB5 501 B 1 
HETATM 9 C C12 NB5 . . . D 2 -51.698 -17.253 -9.466 1 43.19 ? C12 NB5 501 B 1 
HETATM 10 C C13 NB5 . . . D 2 -58.269 -16.662 -12.243 1 41.57 ? C13 NB5 501 B 1 
HETATM 11 C C14 NB5 . . . D 2 -50.871 -17.596 -7.343 1 42.5 ? C14 NB5 501 B 1 
HETATM 12 C C15 NB5 . . . D 2 -49.896 -16.781 -12.695 1 45.05 ? C15 NB5 501 B 1 
HETATM 13 C C16 NB5 . . . D 2 -49.082 -16.436 -11.494 1 44.07 ? C16 NB5 501 B 1 
HETATM 14 C C19 NB5 . . . D 2 -42.236 -19.473 -5.487 1 51.18 ? C19 NB5 501 B 1 
HETATM 15 C C20 NB5 . . . D 2 -43.75 -19.692 -4.054 1 52.21 ? C20 NB5 501 B 1 
HETATM 16 C C21 NB5 . . . D 2 -44.905 -18.338 -6.955 1 42.98 ? C21 NB5 501 B 1 
HETATM 17 C C22 NB5 . . . D 2 -43.715 -19.135 -5.456 1 47.62 ? C22 NB5 501 B 1 
HETATM 18 C C24 NB5 . . . D 2 -59.36 -16.471 -13.221 1 41.32 ? C24 NB5 501 B 1 
HETATM 19 N N29 NB5 . . . D 2 -46.702 -17.496 -8.37 1 42.69 ? N29 NB5 501 B 1 
HETATM 20 C C4 NB5 . . . D 2 -48.021 -17.332 -8.237 1 36.55 ? C4 NB5 501 B 1 
HETATM 21 C C5 NB5 . . . D 2 -47.342 -18.223 -6.309 1 38.02 ? C5 NB5 501 B 1 
HETATM 22 C C6 NB5 . . . D 2 -56.31 -17.05 -10.414 1 42.96 ? C6 NB5 501 B 1 
HETATM 23 C C17 NB5 . . . D 2 -44.669 -19.761 -6.449 1 44.13 ? C17 NB5 501 B 1 
HETATM 24 C C18 NB5 . . . D 2 -44.223 -17.734 -5.718 1 46.32 ? C18 NB5 501 B 1 
HETATM 25 C C23 NB5 . . . D 2 -50.176 -17.461 -11.389 1 44.44 ? C23 NB5 501 B 1 
HETATM 26 C C25 NB5 . . . D 2 -49.752 -18.889 -11.287 1 39.69 ? C25 NB5 501 B 1 
HETATM 27 C C26 NB5 . . . D 2 -41.626 -20.17 -3.247 1 55.48 ? C26 NB5 501 B 1 
HETATM 28 N N27 NB5 . . . D 2 -58.467 -17.642 -11.356 1 44.35 ? N27 NB5 501 B 1 
HETATM 29 N N28 NB5 . . . D 2 -57.197 -15.861 -12.332 1 40.12 ? N28 NB5 501 B 1 
HETATM 30 N N30 NB5 . . . D 2 -54.021 -17.16 -9.873 1 40.42 ? N30 NB5 501 B 1 
HETATM 31 N N31 NB5 . . . D 2 -52.096 -17.649 -6.815 1 40.07 ? N31 NB5 501 B 1 
HETATM 32 N N32 NB5 . . . D 2 -50.653 -17.381 -8.648 1 46.21 ? N32 NB5 501 B 1 
HETATM 33 N N33 NB5 . . . D 2 -46.314 -18.024 -7.184 1 43.32 ? N33 NB5 501 B 1 
HETATM 34 N N34 NB5 . . . D 2 -42.521 -20.409 -4.377 1 54.77 ? N34 NB5 501 B 1 
HETATM 35 N N35 NB5 . . . D 2 -49.748 -17.776 -6.509 1 36.46 ? N35 NB5 501 B 1 
HETATM 36 O O36 NB5 . . . D 2 -51.473 -17.049 -10.83 1 45.93 ? O36 NB5 501 B 1 
HETATM 37 F F37 NB5 . . . D 2 -56.717 -17.554 -7.494 1 36.98 ? F37 NB5 501 B 1 
#
_model_server_stats.io_time_ms              80 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           37 
#