data_6TJ7 # _model_server_result.job_id D_UbcD9MBq2GcnMnNoPrdg _model_server_result.datetime_utc '2024-11-14 17:31:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tj7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":203}' # _entry.id 6TJ7 # _exptl.entry_id 6TJ7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXANE-1,6-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TJ7 _cell.length_a 84.63 _cell.length_b 93.482 _cell.length_c 108.148 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TJ7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall 'I 2b 2c' _symmetry.space_group_name_H-M 'I 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 18 A ASP 16 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc2 A OD1 ASN 20 A ASN 18 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc3 A OD1 ASP 22 A ASP 20 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc4 A O GLU 24 A GLU 22 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc5 D CA CA . A CA 201 1_555 J O HOH . A HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? metalc ? metalc6 D CA CA . A CA 201 1_555 J O HOH . A HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id HEZ _chem_comp.mon_nstd_flag . _chem_comp.name HEXANE-1,6-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 HEZ sing 129 n n O1 HO1 HEZ sing 130 n n C1 C2 HEZ sing 131 n n C1 H11 HEZ sing 132 n n C1 H12 HEZ sing 133 n n C2 C3 HEZ sing 134 n n C2 H21 HEZ sing 135 n n C2 H22 HEZ sing 136 n n C3 C4 HEZ sing 137 n n C3 H31 HEZ sing 138 n n C3 H32 HEZ sing 139 n n C4 C5 HEZ sing 140 n n C4 H41 HEZ sing 141 n n C4 H42 HEZ sing 142 n n C5 C6 HEZ sing 143 n n C5 H51 HEZ sing 144 n n C5 H52 HEZ sing 145 n n C6 O6 HEZ sing 146 n n C6 H61 HEZ sing 147 n n C6 H62 HEZ sing 148 n n O6 HO6 HEZ sing 149 n n # _atom_sites.entry_id 6TJ7 _atom_sites.fract_transf_matrix[1][1] 0.011816 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010697 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009247 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA A 1 201 1 CA CA . E 5 PDO A 1 202 2 PDO PDO . F 6 HEZ A 1 203 3 HEZ HEZ . G 5 PDO A 1 204 4 PDO PDO . H 7 CL B 1 301 1 CL CL . I 8 PG4 C 1 901 5 PG4 PE3 . J 9 HOH A 1 301 63 HOH HOH . J 9 HOH A 2 302 27 HOH HOH . J 9 HOH A 3 303 44 HOH HOH . J 9 HOH A 4 304 60 HOH HOH . J 9 HOH A 5 305 55 HOH HOH . J 9 HOH A 6 306 47 HOH HOH . J 9 HOH A 7 307 4 HOH HOH . J 9 HOH A 8 308 5 HOH HOH . J 9 HOH A 9 309 25 HOH HOH . J 9 HOH A 10 310 41 HOH HOH . J 9 HOH A 11 311 45 HOH HOH . J 9 HOH A 12 312 20 HOH HOH . J 9 HOH A 13 313 2 HOH HOH . J 9 HOH A 14 314 73 HOH HOH . J 9 HOH A 15 315 3 HOH HOH . J 9 HOH A 16 316 40 HOH HOH . J 9 HOH A 17 317 42 HOH HOH . J 9 HOH A 18 318 9 HOH HOH . J 9 HOH A 19 319 22 HOH HOH . J 9 HOH A 20 320 13 HOH HOH . J 9 HOH A 21 321 32 HOH HOH . J 9 HOH A 22 322 8 HOH HOH . J 9 HOH A 23 323 59 HOH HOH . J 9 HOH A 24 324 3 HOH HOH . J 9 HOH A 25 325 75 HOH HOH . J 9 HOH A 26 326 74 HOH HOH . J 9 HOH A 27 327 77 HOH HOH . J 9 HOH A 28 328 69 HOH HOH . J 9 HOH A 29 329 65 HOH HOH . J 9 HOH A 30 330 78 HOH HOH . J 9 HOH A 31 331 57 HOH HOH . J 9 HOH A 32 332 61 HOH HOH . J 9 HOH A 33 333 79 HOH HOH . K 9 HOH B 1 401 33 HOH HOH . K 9 HOH B 2 402 24 HOH HOH . K 9 HOH B 3 403 17 HOH HOH . K 9 HOH B 4 404 53 HOH HOH . K 9 HOH B 5 405 18 HOH HOH . K 9 HOH B 6 406 21 HOH HOH . K 9 HOH B 7 407 26 HOH HOH . K 9 HOH B 8 408 28 HOH HOH . K 9 HOH B 9 409 16 HOH HOH . K 9 HOH B 10 410 66 HOH HOH . K 9 HOH B 11 411 10 HOH HOH . K 9 HOH B 12 412 54 HOH HOH . K 9 HOH B 13 413 72 HOH HOH . K 9 HOH B 14 414 37 HOH HOH . K 9 HOH B 15 415 6 HOH HOH . K 9 HOH B 16 416 14 HOH HOH . K 9 HOH B 17 417 30 HOH HOH . K 9 HOH B 18 418 43 HOH HOH . K 9 HOH B 19 419 12 HOH HOH . K 9 HOH B 20 420 11 HOH HOH . K 9 HOH B 21 421 39 HOH HOH . K 9 HOH B 22 422 51 HOH HOH . K 9 HOH B 23 423 76 HOH HOH . K 9 HOH B 24 424 35 HOH HOH . K 9 HOH B 25 425 52 HOH HOH . K 9 HOH B 26 426 70 HOH HOH . L 9 HOH C 1 1001 36 HOH HOH . L 9 HOH C 2 1002 31 HOH HOH . L 9 HOH C 3 1003 46 HOH HOH . L 9 HOH C 4 1004 67 HOH HOH . L 9 HOH C 5 1005 29 HOH HOH . L 9 HOH C 6 1006 15 HOH HOH . L 9 HOH C 7 1007 58 HOH HOH . L 9 HOH C 8 1008 50 HOH HOH . L 9 HOH C 9 1009 7 HOH HOH . L 9 HOH C 10 1010 49 HOH HOH . L 9 HOH C 11 1011 2 HOH HOH . L 9 HOH C 12 1012 23 HOH HOH . L 9 HOH C 13 1013 1 HOH HOH . L 9 HOH C 14 1014 64 HOH HOH . L 9 HOH C 15 1015 71 HOH HOH . L 9 HOH C 16 1016 38 HOH HOH . L 9 HOH C 17 1017 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 HEZ . . . F 6 60.996 65.857 56.021 0.64 144.67 ? O1 HEZ 203 A 1 HETATM 2 C C1 HEZ . . . F 6 60.938 67.2 56.42 0.64 147.84 ? C1 HEZ 203 A 1 HETATM 3 C C2 HEZ . . . F 6 62.202 67.931 55.965 0.64 148.44 ? C2 HEZ 203 A 1 HETATM 4 C C3 HEZ . . . F 6 62.286 67.928 54.438 0.64 146.18 ? C3 HEZ 203 A 1 HETATM 5 C C4 HEZ . . . F 6 63.741 68.081 53.986 0.64 145.4 ? C4 HEZ 203 A 1 HETATM 6 C C5 HEZ . . . F 6 64.077 66.988 52.968 0.64 142.35 ? C5 HEZ 203 A 1 HETATM 7 C C6 HEZ . . . F 6 65.527 67.105 52.499 0.64 140.65 ? C6 HEZ 203 A 1 HETATM 8 O O6 HEZ . . . F 6 65.875 65.963 51.76 0.64 137.21 ? O6 HEZ 203 A 1 HETATM 9 H HO1 HEZ . . . F 6 60.813 65.354 56.681 0.64 173.72 ? HO1 HEZ 203 A 1 HETATM 10 H H11 HEZ . . . F 6 60.87 67.247 57.386 0.64 177.52 ? H11 HEZ 203 A 1 HETATM 11 H H12 HEZ . . . F 6 60.161 67.622 56.02 0.64 177.52 ? H12 HEZ 203 A 1 HETATM 12 H H21 HEZ . . . F 6 62.981 67.484 56.33 0.64 178.24 ? H21 HEZ 203 A 1 HETATM 13 H H22 HEZ . . . F 6 62.176 68.847 56.283 0.64 178.24 ? H22 HEZ 203 A 1 HETATM 14 H H31 HEZ . . . F 6 61.763 68.665 54.087 0.64 175.53 ? H31 HEZ 203 A 1 HETATM 15 H H32 HEZ . . . F 6 61.932 67.09 54.1 0.64 175.53 ? H32 HEZ 203 A 1 HETATM 16 H H41 HEZ . . . F 6 64.329 67.999 54.754 0.64 174.6 ? H41 HEZ 203 A 1 HETATM 17 H H42 HEZ . . . F 6 63.863 68.952 53.577 0.64 174.6 ? H42 HEZ 203 A 1 HETATM 18 H H51 HEZ . . . F 6 63.487 67.075 52.203 0.64 170.93 ? H51 HEZ 203 A 1 HETATM 19 H H52 HEZ . . . F 6 63.946 66.119 53.38 0.64 170.93 ? H52 HEZ 203 A 1 HETATM 20 H H61 HEZ . . . F 6 66.111 67.182 53.269 0.64 168.89 ? H61 HEZ 203 A 1 HETATM 21 H H62 HEZ . . . F 6 65.624 67.893 51.941 0.64 168.89 ? H62 HEZ 203 A 1 HETATM 22 H HO6 HEZ . . . F 6 65.377 65.904 51.074 0.64 164.77 ? HO6 HEZ 203 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #