data_6TJM # _model_server_result.job_id UIpVjzUBUF2O5XzOfA-9bA _model_server_result.datetime_utc '2024-10-19 07:42:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tjm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6TJM # _exptl.entry_id 6TJM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TJM _cell.length_a 62.841 _cell.length_b 152.31 _cell.length_c 76.792 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TJM _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 62.841 0 0 3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 62.841 0 76.792 4 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 76.792 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ALA 7 B ALA 593 1_555 B N TPO 8 B TPO 594 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 B C TPO 8 B TPO 594 1_555 B N VAL 9 B VAL 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 C MG MG . A MG 301 1_555 D O14 NE5 . A NE5 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc2 C MG MG . A MG 301 1_555 D O11 NE5 . A NE5 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc3 C MG MG . A MG 301 1_555 E O HOH . A HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc4 C MG MG . A MG 301 1_555 E O HOH . A HOH 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc5 C MG MG . A MG 301 1_555 E O HOH . A HOH 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc6 C MG MG . A MG 301 1_555 E O HOH . A HOH 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6TJM _atom_sites.fract_transf_matrix[1][1] 0.015913 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006566 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013022 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG A 1 301 1 MG MG . D 4 NE5 A 1 302 301 NE5 LIG . E 5 HOH A 1 401 125 HOH HOH . E 5 HOH A 2 402 103 HOH HOH . E 5 HOH A 3 403 76 HOH HOH . E 5 HOH A 4 404 83 HOH HOH . E 5 HOH A 5 405 42 HOH HOH . E 5 HOH A 6 406 81 HOH HOH . E 5 HOH A 7 407 99 HOH HOH . E 5 HOH A 8 408 120 HOH HOH . E 5 HOH A 9 409 23 HOH HOH . E 5 HOH A 10 410 89 HOH HOH . E 5 HOH A 11 411 2 HOH HOH . E 5 HOH A 12 412 25 HOH HOH . E 5 HOH A 13 413 52 HOH HOH . E 5 HOH A 14 414 107 HOH HOH . E 5 HOH A 15 415 80 HOH HOH . E 5 HOH A 16 416 5 HOH HOH . E 5 HOH A 17 417 108 HOH HOH . E 5 HOH A 18 418 30 HOH HOH . E 5 HOH A 19 419 14 HOH HOH . E 5 HOH A 20 420 66 HOH HOH . E 5 HOH A 21 421 43 HOH HOH . E 5 HOH A 22 422 22 HOH HOH . E 5 HOH A 23 423 7 HOH HOH . E 5 HOH A 24 424 34 HOH HOH . E 5 HOH A 25 425 3 HOH HOH . E 5 HOH A 26 426 45 HOH HOH . E 5 HOH A 27 427 61 HOH HOH . E 5 HOH A 28 428 11 HOH HOH . E 5 HOH A 29 429 17 HOH HOH . E 5 HOH A 30 430 93 HOH HOH . E 5 HOH A 31 431 55 HOH HOH . E 5 HOH A 32 432 33 HOH HOH . E 5 HOH A 33 433 88 HOH HOH . E 5 HOH A 34 434 48 HOH HOH . E 5 HOH A 35 435 121 HOH HOH . E 5 HOH A 36 436 87 HOH HOH . E 5 HOH A 37 437 31 HOH HOH . E 5 HOH A 38 438 37 HOH HOH . E 5 HOH A 39 439 50 HOH HOH . E 5 HOH A 40 440 16 HOH HOH . E 5 HOH A 41 441 19 HOH HOH . E 5 HOH A 42 442 13 HOH HOH . E 5 HOH A 43 443 35 HOH HOH . E 5 HOH A 44 444 9 HOH HOH . E 5 HOH A 45 445 106 HOH HOH . E 5 HOH A 46 446 67 HOH HOH . E 5 HOH A 47 447 78 HOH HOH . E 5 HOH A 48 448 53 HOH HOH . E 5 HOH A 49 449 18 HOH HOH . E 5 HOH A 50 450 123 HOH HOH . E 5 HOH A 51 451 46 HOH HOH . E 5 HOH A 52 452 71 HOH HOH . E 5 HOH A 53 453 109 HOH HOH . E 5 HOH A 54 454 56 HOH HOH . E 5 HOH A 55 455 111 HOH HOH . E 5 HOH A 56 456 6 HOH HOH . E 5 HOH A 57 457 47 HOH HOH . E 5 HOH A 58 458 57 HOH HOH . E 5 HOH A 59 459 24 HOH HOH . E 5 HOH A 60 460 26 HOH HOH . E 5 HOH A 61 461 101 HOH HOH . E 5 HOH A 62 462 21 HOH HOH . E 5 HOH A 63 463 28 HOH HOH . E 5 HOH A 64 464 40 HOH HOH . E 5 HOH A 65 465 12 HOH HOH . E 5 HOH A 66 466 130 HOH HOH . E 5 HOH A 67 467 112 HOH HOH . E 5 HOH A 68 468 82 HOH HOH . E 5 HOH A 69 469 95 HOH HOH . E 5 HOH A 70 470 49 HOH HOH . E 5 HOH A 71 471 8 HOH HOH . E 5 HOH A 72 472 59 HOH HOH . E 5 HOH A 73 473 38 HOH HOH . E 5 HOH A 74 474 127 HOH HOH . E 5 HOH A 75 475 92 HOH HOH . E 5 HOH A 76 476 90 HOH HOH . E 5 HOH A 77 477 91 HOH HOH . E 5 HOH A 78 478 102 HOH HOH . E 5 HOH A 79 479 41 HOH HOH . E 5 HOH A 80 480 36 HOH HOH . E 5 HOH A 81 481 20 HOH HOH . E 5 HOH A 82 482 60 HOH HOH . E 5 HOH A 83 483 51 HOH HOH . E 5 HOH A 84 484 104 HOH HOH . E 5 HOH A 85 485 39 HOH HOH . E 5 HOH A 86 486 97 HOH HOH . E 5 HOH A 87 487 1 HOH HOH . E 5 HOH A 88 488 115 HOH HOH . E 5 HOH A 89 489 58 HOH HOH . E 5 HOH A 90 490 4 HOH HOH . E 5 HOH A 91 491 10 HOH HOH . E 5 HOH A 92 492 122 HOH HOH . E 5 HOH A 93 493 110 HOH HOH . E 5 HOH A 94 494 72 HOH HOH . E 5 HOH A 95 495 100 HOH HOH . E 5 HOH A 96 496 85 HOH HOH . E 5 HOH A 97 497 70 HOH HOH . E 5 HOH A 98 498 131 HOH HOH . E 5 HOH A 99 499 117 HOH HOH . E 5 HOH A 100 500 124 HOH HOH . E 5 HOH A 101 501 68 HOH HOH . E 5 HOH A 102 502 32 HOH HOH . E 5 HOH A 103 503 44 HOH HOH . E 5 HOH A 104 504 129 HOH HOH . E 5 HOH A 105 505 118 HOH HOH . E 5 HOH A 106 506 96 HOH HOH . E 5 HOH A 107 507 79 HOH HOH . E 5 HOH A 108 508 63 HOH HOH . E 5 HOH A 109 509 75 HOH HOH . E 5 HOH A 110 510 54 HOH HOH . E 5 HOH A 111 511 64 HOH HOH . E 5 HOH A 112 512 94 HOH HOH . E 5 HOH A 113 513 65 HOH HOH . E 5 HOH A 114 514 114 HOH HOH . E 5 HOH A 115 515 84 HOH HOH . E 5 HOH A 116 516 73 HOH HOH . E 5 HOH A 117 517 15 HOH HOH . E 5 HOH A 118 518 69 HOH HOH . E 5 HOH A 119 519 86 HOH HOH . E 5 HOH A 120 520 116 HOH HOH . E 5 HOH A 121 521 74 HOH HOH . F 5 HOH B 1 601 29 HOH HOH . F 5 HOH B 2 602 27 HOH HOH . F 5 HOH B 3 603 77 HOH HOH . F 5 HOH B 4 604 113 HOH HOH . F 5 HOH B 5 605 62 HOH HOH . F 5 HOH B 6 606 126 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 33.628 _atom_site.Cartn_y 16.015 _atom_site.Cartn_z 21.296 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 48.08 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #