data_6TJN # _model_server_result.job_id 6Q-c1Iw04QpnlfEniDBUgA _model_server_result.datetime_utc '2024-11-04 22:22:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tjn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 6TJN # _exptl.entry_id 6TJN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 209.199 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-[(~{E})-(4-hydroxyphenyl)methylideneamino]oxypropanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TJN _cell.length_a 43.19 _cell.length_b 85.87 _cell.length_c 63.94 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TJN _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C10 H11 N O4' _chem_comp.formula_weight 209.199 _chem_comp.id NEK _chem_comp.mon_nstd_flag . _chem_comp.name '3-[(~{E})-(4-hydroxyphenyl)methylideneamino]oxypropanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O14 C13 NEK doub 218 n n C13 C12 NEK sing 219 n n C13 O15 NEK sing 220 n n C12 C11 NEK sing 221 n n C11 O10 NEK sing 222 n n O10 N09 NEK sing 223 n n N09 C08 NEK doub 224 e n C08 C04 NEK sing 225 n n C04 C05 NEK doub 226 n y C04 C03 NEK sing 227 n y C05 C06 NEK sing 228 n y C03 C02 NEK doub 229 n y C06 C01 NEK doub 230 n y C02 C01 NEK sing 231 n y C01 O07 NEK sing 232 n n C02 H02 NEK sing 233 n n C03 H03 NEK sing 234 n n C05 H05 NEK sing 235 n n C06 H06 NEK sing 236 n n C08 H08 NEK sing 237 n n C11 H111 NEK sing 238 n n C11 H112 NEK sing 239 n n C12 H121 NEK sing 240 n n C12 H122 NEK sing 241 n n O07 HO07 NEK sing 242 n n O15 H1 NEK sing 243 n n # _atom_sites.entry_id 6TJN _atom_sites.fract_transf_matrix[1][1] 0.023154 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011646 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01564 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NEK A 1 201 201 NEK mc4 . D 2 NEK B 1 201 201 NEK mc4 . E 3 HOH A 1 301 14 HOH HOH . E 3 HOH A 2 302 198 HOH HOH . E 3 HOH A 3 303 92 HOH HOH . E 3 HOH A 4 304 33 HOH HOH . E 3 HOH A 5 305 35 HOH HOH . E 3 HOH A 6 306 69 HOH HOH . E 3 HOH A 7 307 200 HOH HOH . E 3 HOH A 8 308 210 HOH HOH . E 3 HOH A 9 309 32 HOH HOH . E 3 HOH A 10 310 63 HOH HOH . E 3 HOH A 11 311 9 HOH HOH . E 3 HOH A 12 312 38 HOH HOH . E 3 HOH A 13 313 110 HOH HOH . E 3 HOH A 14 314 11 HOH HOH . E 3 HOH A 15 315 17 HOH HOH . E 3 HOH A 16 316 130 HOH HOH . E 3 HOH A 17 317 31 HOH HOH . E 3 HOH A 18 318 1 HOH HOH . E 3 HOH A 19 319 156 HOH HOH . E 3 HOH A 20 320 91 HOH HOH . E 3 HOH A 21 321 185 HOH HOH . E 3 HOH A 22 322 103 HOH HOH . E 3 HOH A 23 323 70 HOH HOH . E 3 HOH A 24 324 87 HOH HOH . E 3 HOH A 25 325 141 HOH HOH . E 3 HOH A 26 326 16 HOH HOH . E 3 HOH A 27 327 18 HOH HOH . E 3 HOH A 28 328 98 HOH HOH . E 3 HOH A 29 329 39 HOH HOH . E 3 HOH A 30 330 54 HOH HOH . E 3 HOH A 31 331 44 HOH HOH . E 3 HOH A 32 332 191 HOH HOH . E 3 HOH A 33 333 113 HOH HOH . E 3 HOH A 34 334 94 HOH HOH . E 3 HOH A 35 335 23 HOH HOH . E 3 HOH A 36 336 53 HOH HOH . E 3 HOH A 37 337 30 HOH HOH . E 3 HOH A 38 338 117 HOH HOH . E 3 HOH A 39 339 5 HOH HOH . E 3 HOH A 40 340 19 HOH HOH . E 3 HOH A 41 341 8 HOH HOH . E 3 HOH A 42 342 2 HOH HOH . E 3 HOH A 43 343 148 HOH HOH . E 3 HOH A 44 344 90 HOH HOH . E 3 HOH A 45 345 43 HOH HOH . E 3 HOH A 46 346 58 HOH HOH . E 3 HOH A 47 347 24 HOH HOH . E 3 HOH A 48 348 145 HOH HOH . E 3 HOH A 49 349 118 HOH HOH . E 3 HOH A 50 350 49 HOH HOH . E 3 HOH A 51 351 133 HOH HOH . E 3 HOH A 52 352 47 HOH HOH . E 3 HOH A 53 353 42 HOH HOH . E 3 HOH A 54 354 101 HOH HOH . E 3 HOH A 55 355 66 HOH HOH . E 3 HOH A 56 356 28 HOH HOH . E 3 HOH A 57 357 46 HOH HOH . E 3 HOH A 58 358 13 HOH HOH . E 3 HOH A 59 359 150 HOH HOH . E 3 HOH A 60 360 147 HOH HOH . E 3 HOH A 61 361 77 HOH HOH . E 3 HOH A 62 362 64 HOH HOH . E 3 HOH A 63 363 161 HOH HOH . E 3 HOH A 64 364 137 HOH HOH . E 3 HOH A 65 365 12 HOH HOH . E 3 HOH A 66 366 57 HOH HOH . E 3 HOH A 67 367 95 HOH HOH . E 3 HOH A 68 368 27 HOH HOH . E 3 HOH A 69 369 84 HOH HOH . E 3 HOH A 70 370 85 HOH HOH . E 3 HOH A 71 371 52 HOH HOH . E 3 HOH A 72 372 119 HOH HOH . E 3 HOH A 73 373 114 HOH HOH . E 3 HOH A 74 374 127 HOH HOH . E 3 HOH A 75 375 204 HOH HOH . E 3 HOH A 76 376 154 HOH HOH . E 3 HOH A 77 377 146 HOH HOH . E 3 HOH A 78 378 215 HOH HOH . E 3 HOH A 79 379 162 HOH HOH . E 3 HOH A 80 380 157 HOH HOH . E 3 HOH A 81 381 126 HOH HOH . E 3 HOH A 82 382 188 HOH HOH . E 3 HOH A 83 383 183 HOH HOH . E 3 HOH A 84 384 172 HOH HOH . E 3 HOH A 85 385 131 HOH HOH . E 3 HOH A 86 386 45 HOH HOH . E 3 HOH A 87 387 173 HOH HOH . E 3 HOH A 88 388 203 HOH HOH . E 3 HOH A 89 389 175 HOH HOH . E 3 HOH A 90 390 166 HOH HOH . E 3 HOH A 91 391 182 HOH HOH . E 3 HOH A 92 392 179 HOH HOH . E 3 HOH A 93 393 169 HOH HOH . E 3 HOH A 94 394 75 HOH HOH . E 3 HOH A 95 395 51 HOH HOH . E 3 HOH A 96 396 134 HOH HOH . E 3 HOH A 97 397 201 HOH HOH . E 3 HOH A 98 398 83 HOH HOH . E 3 HOH A 99 399 184 HOH HOH . E 3 HOH A 100 400 152 HOH HOH . E 3 HOH A 101 401 218 HOH HOH . E 3 HOH A 102 402 211 HOH HOH . E 3 HOH A 103 403 167 HOH HOH . E 3 HOH A 104 404 107 HOH HOH . E 3 HOH A 105 405 122 HOH HOH . E 3 HOH A 106 406 60 HOH HOH . E 3 HOH A 107 407 128 HOH HOH . E 3 HOH A 108 408 106 HOH HOH . E 3 HOH A 109 409 109 HOH HOH . E 3 HOH A 110 410 216 HOH HOH . E 3 HOH A 111 411 155 HOH HOH . E 3 HOH A 112 412 197 HOH HOH . E 3 HOH A 113 413 176 HOH HOH . F 3 HOH B 1 301 217 HOH HOH . F 3 HOH B 2 302 96 HOH HOH . F 3 HOH B 3 303 163 HOH HOH . F 3 HOH B 4 304 76 HOH HOH . F 3 HOH B 5 305 73 HOH HOH . F 3 HOH B 6 306 111 HOH HOH . F 3 HOH B 7 307 50 HOH HOH . F 3 HOH B 8 308 214 HOH HOH . F 3 HOH B 9 309 93 HOH HOH . F 3 HOH B 10 310 10 HOH HOH . F 3 HOH B 11 311 129 HOH HOH . F 3 HOH B 12 312 121 HOH HOH . F 3 HOH B 13 313 68 HOH HOH . F 3 HOH B 14 314 4 HOH HOH . F 3 HOH B 15 315 6 HOH HOH . F 3 HOH B 16 316 59 HOH HOH . F 3 HOH B 17 317 78 HOH HOH . F 3 HOH B 18 318 62 HOH HOH . F 3 HOH B 19 319 199 HOH HOH . F 3 HOH B 20 320 71 HOH HOH . F 3 HOH B 21 321 36 HOH HOH . F 3 HOH B 22 322 89 HOH HOH . F 3 HOH B 23 323 25 HOH HOH . F 3 HOH B 24 324 138 HOH HOH . F 3 HOH B 25 325 20 HOH HOH . F 3 HOH B 26 326 124 HOH HOH . F 3 HOH B 27 327 193 HOH HOH . F 3 HOH B 28 328 74 HOH HOH . F 3 HOH B 29 329 3 HOH HOH . F 3 HOH B 30 330 56 HOH HOH . F 3 HOH B 31 331 139 HOH HOH . F 3 HOH B 32 332 34 HOH HOH . F 3 HOH B 33 333 160 HOH HOH . F 3 HOH B 34 334 159 HOH HOH . F 3 HOH B 35 335 202 HOH HOH . F 3 HOH B 36 336 15 HOH HOH . F 3 HOH B 37 337 86 HOH HOH . F 3 HOH B 38 338 72 HOH HOH . F 3 HOH B 39 339 22 HOH HOH . F 3 HOH B 40 340 7 HOH HOH . F 3 HOH B 41 341 65 HOH HOH . F 3 HOH B 42 342 123 HOH HOH . F 3 HOH B 43 343 37 HOH HOH . F 3 HOH B 44 344 48 HOH HOH . F 3 HOH B 45 345 41 HOH HOH . F 3 HOH B 46 346 81 HOH HOH . F 3 HOH B 47 347 55 HOH HOH . F 3 HOH B 48 348 29 HOH HOH . F 3 HOH B 49 349 105 HOH HOH . F 3 HOH B 50 350 144 HOH HOH . F 3 HOH B 51 351 40 HOH HOH . F 3 HOH B 52 352 189 HOH HOH . F 3 HOH B 53 353 120 HOH HOH . F 3 HOH B 54 354 206 HOH HOH . F 3 HOH B 55 355 186 HOH HOH . F 3 HOH B 56 356 158 HOH HOH . F 3 HOH B 57 357 116 HOH HOH . F 3 HOH B 58 358 88 HOH HOH . F 3 HOH B 59 359 67 HOH HOH . F 3 HOH B 60 360 79 HOH HOH . F 3 HOH B 61 361 102 HOH HOH . F 3 HOH B 62 362 97 HOH HOH . F 3 HOH B 63 363 207 HOH HOH . F 3 HOH B 64 364 142 HOH HOH . F 3 HOH B 65 365 190 HOH HOH . F 3 HOH B 66 366 100 HOH HOH . F 3 HOH B 67 367 21 HOH HOH . F 3 HOH B 68 368 208 HOH HOH . F 3 HOH B 69 369 164 HOH HOH . F 3 HOH B 70 370 171 HOH HOH . F 3 HOH B 71 371 143 HOH HOH . F 3 HOH B 72 372 165 HOH HOH . F 3 HOH B 73 373 174 HOH HOH . F 3 HOH B 74 374 82 HOH HOH . F 3 HOH B 75 375 104 HOH HOH . F 3 HOH B 76 376 178 HOH HOH . F 3 HOH B 77 377 209 HOH HOH . F 3 HOH B 78 378 132 HOH HOH . F 3 HOH B 79 379 135 HOH HOH . F 3 HOH B 80 380 26 HOH HOH . F 3 HOH B 81 381 99 HOH HOH . F 3 HOH B 82 382 213 HOH HOH . F 3 HOH B 83 383 112 HOH HOH . F 3 HOH B 84 384 177 HOH HOH . F 3 HOH B 85 385 80 HOH HOH . F 3 HOH B 86 386 108 HOH HOH . F 3 HOH B 87 387 136 HOH HOH . F 3 HOH B 88 388 115 HOH HOH . F 3 HOH B 89 389 125 HOH HOH . F 3 HOH B 90 390 170 HOH HOH . F 3 HOH B 91 391 149 HOH HOH . F 3 HOH B 92 392 195 HOH HOH . F 3 HOH B 93 393 187 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 NEK . . . D 2 0.016 -0.784 21.9 0.66 69.18 ? C01 NEK 201 B 1 HETATM 2 C C02 NEK . . . D 2 -0.627 0.339 22.118 0.66 69.01 ? C02 NEK 201 B 1 HETATM 3 C C03 NEK . . . D 2 -0.814 0.833 23.55 0.66 74.1 ? C03 NEK 201 B 1 HETATM 4 C C04 NEK . . . D 2 -0.341 0.136 24.562 0.66 78.34 ? C04 NEK 201 B 1 HETATM 5 C C05 NEK . . . D 2 0.404 -1.165 24.311 0.66 78.85 ? C05 NEK 201 B 1 HETATM 6 C C06 NEK . . . D 2 0.566 -1.582 23.08 0.66 74.17 ? C06 NEK 201 B 1 HETATM 7 C C08 NEK . . . D 2 -0.524 0.627 25.992 0.66 81.77 ? C08 NEK 201 B 1 HETATM 8 C C11 NEK . . . D 2 0.218 -0.234 29.107 0.66 88.22 ? C11 NEK 201 B 1 HETATM 9 C C12 NEK . . . D 2 1.218 -1.321 28.706 0.66 88.94 ? C12 NEK 201 B 1 HETATM 10 C C13 NEK . . . D 2 1.659 -2.107 29.945 0.66 89.41 ? C13 NEK 201 B 1 HETATM 11 N N09 NEK . . . D 2 0.331 0.342 26.855 0.66 84.3 ? N09 NEK 201 B 1 HETATM 12 O O07 NEK . . . D 2 0.2 -1.257 20.593 0.66 58.2 ? O07 NEK 201 B 1 HETATM 13 O O10 NEK . . . D 2 0.166 0.802 28.166 0.66 86.12 ? O10 NEK 201 B 1 HETATM 14 O O14 NEK . . . D 2 2.787 -1.9 30.463 0.66 84.62 ? O14 NEK 201 B 1 HETATM 15 O O15 NEK . . . D 2 0.897 -2.969 30.454 0.66 88.36 ? O15 NEK 201 B 1 HETATM 16 H H02 NEK . . . D 2 -0.967 0.83 21.405 0.66 82.81 ? H02 NEK 201 B 1 HETATM 17 H H03 NEK . . . D 2 -1.265 1.631 23.709 0.66 88.92 ? H03 NEK 201 B 1 HETATM 18 H H05 NEK . . . D 2 0.742 -1.658 25.023 0.66 94.62 ? H05 NEK 201 B 1 HETATM 19 H H06 NEK . . . D 2 1.022 -2.377 22.923 0.66 89.01 ? H06 NEK 201 B 1 HETATM 20 H H08 NEK . . . D 2 -1.268 1.136 26.221 0.66 98.13 ? H08 NEK 201 B 1 HETATM 21 H H111 NEK . . . D 2 -0.664 -0.632 29.184 0.66 105.86 ? H111 NEK 201 B 1 HETATM 22 H H112 NEK . . . D 2 0.482 0.134 29.965 0.66 105.86 ? H112 NEK 201 B 1 HETATM 23 H H121 NEK . . . D 2 1.993 -0.908 28.294 0.66 106.73 ? H121 NEK 201 B 1 HETATM 24 H H122 NEK . . . D 2 0.799 -1.925 28.073 0.66 106.73 ? H122 NEK 201 B 1 HETATM 25 H HO07 NEK . . . D 2 0.733 -0.741 20.177 0.66 69.85 ? HO07 NEK 201 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #