data_6TK2 # _model_server_result.job_id b37fEAVys_Xuu1IlAYhTCg _model_server_result.datetime_utc '2024-11-08 03:46:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tk2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":312}' # _entry.id 6TK2 # _exptl.entry_id 6TK2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.547 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description EICOSANE _entity.pdbx_number_of_molecules 26 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TK2 _cell.length_a 41.54 _cell.length_b 84.48 _cell.length_c 235.56 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TK2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 255 A LYS 255 1_555 B C15 RET . A RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 ? metalc ? metalc1 A OD1 ASN 112 A ASN 112 1_555 CA NA NA . A NA 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc2 A OD1 ASP 251 A ASP 251 1_555 CA NA NA . A NA 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? metalc ? metalc3 A OD2 ASP 251 A ASP 251 1_555 CA NA NA . A NA 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? # _chem_comp.formula 'C20 H42' _chem_comp.formula_weight 282.547 _chem_comp.id LFA _chem_comp.mon_nstd_flag . _chem_comp.name EICOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 LFA sing 181 n n C1 H11 LFA sing 182 n n C1 H12 LFA sing 183 n n C1 H13 LFA sing 184 n n C2 C3 LFA sing 185 n n C2 H21 LFA sing 186 n n C2 H22 LFA sing 187 n n C3 C4 LFA sing 188 n n C3 H31 LFA sing 189 n n C3 H32 LFA sing 190 n n C4 C5 LFA sing 191 n n C4 H41 LFA sing 192 n n C4 H42 LFA sing 193 n n C5 C6 LFA sing 194 n n C5 H51 LFA sing 195 n n C5 H52 LFA sing 196 n n C6 C7 LFA sing 197 n n C6 H61 LFA sing 198 n n C6 H62 LFA sing 199 n n C7 C8 LFA sing 200 n n C7 H71 LFA sing 201 n n C7 H72 LFA sing 202 n n C8 C9 LFA sing 203 n n C8 H81 LFA sing 204 n n C8 H82 LFA sing 205 n n C9 C10 LFA sing 206 n n C9 H91 LFA sing 207 n n C9 H92 LFA sing 208 n n C10 C11 LFA sing 209 n n C10 H101 LFA sing 210 n n C10 H102 LFA sing 211 n n C11 C12 LFA sing 212 n n C11 H111 LFA sing 213 n n C11 H112 LFA sing 214 n n C12 C13 LFA sing 215 n n C12 H121 LFA sing 216 n n C12 H122 LFA sing 217 n n C13 C14 LFA sing 218 n n C13 H131 LFA sing 219 n n C13 H132 LFA sing 220 n n C14 C15 LFA sing 221 n n C14 H141 LFA sing 222 n n C14 H142 LFA sing 223 n n C15 C16 LFA sing 224 n n C15 H151 LFA sing 225 n n C15 H152 LFA sing 226 n n C16 C17 LFA sing 227 n n C16 H161 LFA sing 228 n n C16 H162 LFA sing 229 n n C17 C18 LFA sing 230 n n C17 H171 LFA sing 231 n n C17 H172 LFA sing 232 n n C18 C19 LFA sing 233 n n C18 H181 LFA sing 234 n n C18 H182 LFA sing 235 n n C19 C20 LFA sing 236 n n C19 H191 LFA sing 237 n n C19 H192 LFA sing 238 n n C20 H201 LFA sing 239 n n C20 H202 LFA sing 240 n n C20 H203 LFA sing 241 n n # _atom_sites.entry_id 6TK2 _atom_sites.fract_transf_matrix[1][1] 0.024073 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011837 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004245 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET A 1 301 301 RET RET . C 3 LFA A 1 302 501 LFA LFA . D 3 LFA A 1 303 502 LFA LFA . E 3 LFA A 1 304 503 LFA LFA . F 3 LFA A 1 305 504 LFA LFA . G 3 LFA A 1 306 505 LFA LFA . H 3 LFA A 1 307 506 LFA LFA . I 3 LFA A 1 308 507 LFA LFA . J 3 LFA A 1 309 508 LFA LFA . K 3 LFA A 1 310 509 LFA LFA . L 3 LFA A 1 311 510 LFA LFA . M 3 LFA A 1 312 511 LFA LFA . N 3 LFA A 1 313 512 LFA LFA . O 3 LFA A 1 314 513 LFA LFA . P 3 LFA A 1 315 515 LFA LFA . Q 3 LFA A 1 316 516 LFA LFA . R 3 LFA A 1 317 517 LFA LFA . S 3 LFA A 1 318 518 LFA LFA . T 3 LFA A 1 319 519 LFA LFA . U 3 LFA A 1 320 520 LFA LFA . V 3 LFA A 1 321 521 LFA LFA . W 3 LFA A 1 322 523 LFA LFA . X 3 LFA A 1 323 525 LFA LFA . Y 3 LFA A 1 324 527 LFA LFA . Z 3 LFA A 1 325 529 LFA LFA . AA 3 LFA A 1 326 532 LFA LFA . BA 3 LFA A 1 327 533 LFA LFA . CA 4 NA A 1 328 601 NA NA . DA 5 HOH A 1 420 420 HOH HOH . DA 5 HOH A 2 486 486 HOH HOH . DA 5 HOH A 3 488 488 HOH HOH . DA 5 HOH A 4 417 417 HOH HOH . DA 5 HOH A 5 461 461 HOH HOH . DA 5 HOH A 6 429 429 HOH HOH . DA 5 HOH A 7 421 421 HOH HOH . DA 5 HOH A 8 422 422 HOH HOH . DA 5 HOH A 9 403 403 HOH HOH . DA 5 HOH A 10 484 484 HOH HOH . DA 5 HOH A 11 433 433 HOH HOH . DA 5 HOH A 12 416 416 HOH HOH . DA 5 HOH A 13 487 487 HOH HOH . DA 5 HOH A 14 489 489 HOH HOH . DA 5 HOH A 15 459 459 HOH HOH . DA 5 HOH A 16 401 401 HOH HOH . DA 5 HOH A 17 407 407 HOH HOH . DA 5 HOH A 18 436 436 HOH HOH . DA 5 HOH A 19 414 414 HOH HOH . DA 5 HOH A 20 428 428 HOH HOH . DA 5 HOH A 21 456 456 HOH HOH . DA 5 HOH A 22 431 431 HOH HOH . DA 5 HOH A 23 450 450 HOH HOH . DA 5 HOH A 24 404 404 HOH HOH . DA 5 HOH A 25 427 427 HOH HOH . DA 5 HOH A 26 405 405 HOH HOH . DA 5 HOH A 27 478 478 HOH HOH . DA 5 HOH A 28 409 409 HOH HOH . DA 5 HOH A 29 402 402 HOH HOH . DA 5 HOH A 30 472 472 HOH HOH . DA 5 HOH A 31 455 455 HOH HOH . DA 5 HOH A 32 438 438 HOH HOH . DA 5 HOH A 33 444 444 HOH HOH . DA 5 HOH A 34 447 447 HOH HOH . DA 5 HOH A 35 410 410 HOH HOH . DA 5 HOH A 36 413 413 HOH HOH . DA 5 HOH A 37 483 483 HOH HOH . DA 5 HOH A 38 408 408 HOH HOH . DA 5 HOH A 39 475 475 HOH HOH . DA 5 HOH A 40 425 425 HOH HOH . DA 5 HOH A 41 464 464 HOH HOH . DA 5 HOH A 42 465 465 HOH HOH . DA 5 HOH A 43 446 446 HOH HOH . DA 5 HOH A 44 419 419 HOH HOH . DA 5 HOH A 45 445 445 HOH HOH . DA 5 HOH A 46 443 443 HOH HOH . DA 5 HOH A 47 454 454 HOH HOH . DA 5 HOH A 48 437 437 HOH HOH . DA 5 HOH A 49 439 439 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LFA . . . M 3 47.135 111.982 282.735 1 60.59 ? C1 LFA 312 A 1 HETATM 2 C C2 LFA . . . M 3 47.643 111.959 281.296 1 71.15 ? C2 LFA 312 A 1 HETATM 3 C C3 LFA . . . M 3 46.761 112.849 280.423 1 73.62 ? C3 LFA 312 A 1 HETATM 4 C C4 LFA . . . M 3 47.633 113.55 279.384 1 65.04 ? C4 LFA 312 A 1 HETATM 5 C C5 LFA . . . M 3 46.848 113.735 278.089 1 68.06 ? C5 LFA 312 A 1 HETATM 6 C C6 LFA . . . M 3 47.826 114.03 276.954 1 67.78 ? C6 LFA 312 A 1 HETATM 7 C C7 LFA . . . M 3 47.136 113.792 275.614 1 74.93 ? C7 LFA 312 A 1 HETATM 8 C C8 LFA . . . M 3 47.306 115.029 274.737 1 73.37 ? C8 LFA 312 A 1 HETATM 9 C C9 LFA . . . M 3 46.92 114.69 273.299 1 76.07 ? C9 LFA 312 A 1 HETATM 10 C C10 LFA . . . M 3 47.484 115.759 272.367 1 73.41 ? C10 LFA 312 A 1 HETATM 11 C C11 LFA . . . M 3 47.446 115.254 270.927 1 86.01 ? C11 LFA 312 A 1 HETATM 12 C C12 LFA . . . M 3 48.362 116.12 270.067 1 86.34 ? C12 LFA 312 A 1 HETATM 13 C C13 LFA . . . M 3 48.425 115.549 268.653 1 64.14 ? C13 LFA 312 A 1 HETATM 14 C C14 LFA . . . M 3 47.409 116.265 267.767 1 71.4 ? C14 LFA 312 A 1 HETATM 15 C C15 LFA . . . M 3 47.28 115.516 266.442 1 72.1 ? C15 LFA 312 A 1 HETATM 16 C C16 LFA . . . M 3 46.53 116.385 265.434 1 73.15 ? C16 LFA 312 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 16 #