data_6TK5
#
_model_server_result.job_id            -cMm0gnUylu7XwJz7gP9qQ 
_model_server_result.datetime_utc      '2024-11-08 04:18:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6tk5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":313}' 
#
_entry.id    6TK5 
#
_exptl.entry_id    6TK5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              282.547 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            EICOSANE 
_entity.pdbx_number_of_molecules    26 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6TK5 
_cell.length_a            41.54 
_cell.length_b            84.48 
_cell.length_c            235.56 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6TK5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
? 3 Z N N 
? 3 AA N N 
? 3 BA N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            NZ 
_struct_conn.ptnr1_label_comp_id            LYS 
_struct_conn.ptnr1_label_seq_id             255 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             LYS 
_struct_conn.ptnr1_auth_seq_id              255 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            C15 
_struct_conn.ptnr2_label_comp_id            RET 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             RET 
_struct_conn.ptnr2_auth_seq_id              301 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.423 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C20 H42' 
_chem_comp.formula_weight    282.547 
_chem_comp.id                LFA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              EICOSANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'LIPID FRAGMENT' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 LFA sing 181 n n 
C1 H11 LFA sing 182 n n 
C1 H12 LFA sing 183 n n 
C1 H13 LFA sing 184 n n 
C2 C3 LFA sing 185 n n 
C2 H21 LFA sing 186 n n 
C2 H22 LFA sing 187 n n 
C3 C4 LFA sing 188 n n 
C3 H31 LFA sing 189 n n 
C3 H32 LFA sing 190 n n 
C4 C5 LFA sing 191 n n 
C4 H41 LFA sing 192 n n 
C4 H42 LFA sing 193 n n 
C5 C6 LFA sing 194 n n 
C5 H51 LFA sing 195 n n 
C5 H52 LFA sing 196 n n 
C6 C7 LFA sing 197 n n 
C6 H61 LFA sing 198 n n 
C6 H62 LFA sing 199 n n 
C7 C8 LFA sing 200 n n 
C7 H71 LFA sing 201 n n 
C7 H72 LFA sing 202 n n 
C8 C9 LFA sing 203 n n 
C8 H81 LFA sing 204 n n 
C8 H82 LFA sing 205 n n 
C9 C10 LFA sing 206 n n 
C9 H91 LFA sing 207 n n 
C9 H92 LFA sing 208 n n 
C10 C11 LFA sing 209 n n 
C10 H101 LFA sing 210 n n 
C10 H102 LFA sing 211 n n 
C11 C12 LFA sing 212 n n 
C11 H111 LFA sing 213 n n 
C11 H112 LFA sing 214 n n 
C12 C13 LFA sing 215 n n 
C12 H121 LFA sing 216 n n 
C12 H122 LFA sing 217 n n 
C13 C14 LFA sing 218 n n 
C13 H131 LFA sing 219 n n 
C13 H132 LFA sing 220 n n 
C14 C15 LFA sing 221 n n 
C14 H141 LFA sing 222 n n 
C14 H142 LFA sing 223 n n 
C15 C16 LFA sing 224 n n 
C15 H151 LFA sing 225 n n 
C15 H152 LFA sing 226 n n 
C16 C17 LFA sing 227 n n 
C16 H161 LFA sing 228 n n 
C16 H162 LFA sing 229 n n 
C17 C18 LFA sing 230 n n 
C17 H171 LFA sing 231 n n 
C17 H172 LFA sing 232 n n 
C18 C19 LFA sing 233 n n 
C18 H181 LFA sing 234 n n 
C18 H182 LFA sing 235 n n 
C19 C20 LFA sing 236 n n 
C19 H191 LFA sing 237 n n 
C19 H192 LFA sing 238 n n 
C20 H201 LFA sing 239 n n 
C20 H202 LFA sing 240 n n 
C20 H203 LFA sing 241 n n 
#
_atom_sites.entry_id                     6TK5 
_atom_sites.fract_transf_matrix[1][1]    0.024073 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011837 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004245 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 RET A 1 301 301 RET RET . 
C 3 LFA A 1 302 501 LFA LFA . 
D 3 LFA A 1 303 502 LFA LFA . 
E 3 LFA A 1 304 503 LFA LFA . 
F 3 LFA A 1 305 504 LFA LFA . 
G 3 LFA A 1 306 505 LFA LFA . 
H 3 LFA A 1 307 506 LFA LFA . 
I 3 LFA A 1 308 507 LFA LFA . 
J 3 LFA A 1 309 508 LFA LFA . 
K 3 LFA A 1 310 509 LFA LFA . 
L 3 LFA A 1 311 510 LFA LFA . 
M 3 LFA A 1 312 511 LFA LFA . 
N 3 LFA A 1 313 512 LFA LFA . 
O 3 LFA A 1 314 513 LFA LFA . 
P 3 LFA A 1 315 515 LFA LFA . 
Q 3 LFA A 1 316 516 LFA LFA . 
R 3 LFA A 1 317 517 LFA LFA . 
S 3 LFA A 1 318 518 LFA LFA . 
T 3 LFA A 1 319 519 LFA LFA . 
U 3 LFA A 1 320 520 LFA LFA . 
V 3 LFA A 1 321 521 LFA LFA . 
W 3 LFA A 1 322 523 LFA LFA . 
X 3 LFA A 1 323 525 LFA LFA . 
Y 3 LFA A 1 324 527 LFA LFA . 
Z 3 LFA A 1 325 529 LFA LFA . 
AA 3 LFA A 1 326 532 LFA LFA . 
BA 3 LFA A 1 327 533 LFA LFA . 
CA 4 HOH A 1 433 433 HOH HOH . 
CA 4 HOH A 2 486 486 HOH HOH . 
CA 4 HOH A 3 407 407 HOH HOH . 
CA 4 HOH A 4 487 487 HOH HOH . 
CA 4 HOH A 5 454 454 HOH HOH . 
CA 4 HOH A 6 416 416 HOH HOH . 
CA 4 HOH A 7 414 414 HOH HOH . 
CA 4 HOH A 8 475 475 HOH HOH . 
CA 4 HOH A 9 484 484 HOH HOH . 
CA 4 HOH A 10 438 438 HOH HOH . 
CA 4 HOH A 11 410 410 HOH HOH . 
CA 4 HOH A 12 420 420 HOH HOH . 
CA 4 HOH A 13 464 464 HOH HOH . 
CA 4 HOH A 14 485 485 HOH HOH . 
CA 4 HOH A 15 413 413 HOH HOH . 
CA 4 HOH A 16 409 409 HOH HOH . 
CA 4 HOH A 17 421 421 HOH HOH . 
CA 4 HOH A 18 404 404 HOH HOH . 
CA 4 HOH A 19 401 401 HOH HOH . 
CA 4 HOH A 20 431 431 HOH HOH . 
CA 4 HOH A 21 403 403 HOH HOH . 
CA 4 HOH A 22 436 436 HOH HOH . 
CA 4 HOH A 23 405 405 HOH HOH . 
CA 4 HOH A 24 461 461 HOH HOH . 
CA 4 HOH A 25 456 456 HOH HOH . 
CA 4 HOH A 26 417 417 HOH HOH . 
CA 4 HOH A 27 427 427 HOH HOH . 
CA 4 HOH A 28 472 472 HOH HOH . 
CA 4 HOH A 29 406 406 HOH HOH . 
CA 4 HOH A 30 455 455 HOH HOH . 
CA 4 HOH A 31 422 422 HOH HOH . 
CA 4 HOH A 32 402 402 HOH HOH . 
CA 4 HOH A 33 459 459 HOH HOH . 
CA 4 HOH A 34 408 408 HOH HOH . 
CA 4 HOH A 35 483 483 HOH HOH . 
CA 4 HOH A 36 482 482 HOH HOH . 
CA 4 HOH A 37 415 415 HOH HOH . 
CA 4 HOH A 38 450 450 HOH HOH . 
CA 4 HOH A 39 428 428 HOH HOH . 
CA 4 HOH A 40 425 425 HOH HOH . 
CA 4 HOH A 41 478 478 HOH HOH . 
CA 4 HOH A 42 445 445 HOH HOH . 
CA 4 HOH A 43 488 488 HOH HOH . 
CA 4 HOH A 44 429 429 HOH HOH . 
CA 4 HOH A 45 419 419 HOH HOH . 
CA 4 HOH A 46 447 447 HOH HOH . 
CA 4 HOH A 47 444 444 HOH HOH . 
CA 4 HOH A 48 446 446 HOH HOH . 
CA 4 HOH A 49 437 437 HOH HOH . 
CA 4 HOH A 50 443 443 HOH HOH . 
CA 4 HOH A 51 465 465 HOH HOH . 
CA 4 HOH A 52 477 477 HOH HOH . 
CA 4 HOH A 53 439 439 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 LFA . . . N 3 62.739 94.865 261.512 1 55.76 ? C1 LFA 313 A 1 
HETATM 2 C C2 LFA . . . N 3 62.713 93.45 262.091 1 54.13 ? C2 LFA 313 A 1 
HETATM 3 C C3 LFA . . . N 3 63.964 92.705 261.638 1 57.57 ? C3 LFA 313 A 1 
HETATM 4 C C4 LFA . . . N 3 63.625 91.227 261.45 1 68.13 ? C4 LFA 313 A 1 
HETATM 5 C C5 LFA . . . N 3 62.748 91.058 260.211 1 71.16 ? C5 LFA 313 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           5 
#