data_6TKR
#
_model_server_result.job_id            9AY9sDIsqm_7ZVtJtiuuAw 
_model_server_result.datetime_utc      '2024-11-04 22:44:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6tkr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1201}' 
#
_entry.id    6TKR 
#
_exptl.entry_id    6TKR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              509.534 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ~{N}-[3-[5-(5-ethoxypyridin-2-yl)-4-(2-fluorophenyl)-1,2,4-triazol-3-yl]cyclobutyl]-1,5-naphthyridine-2-carboxamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6TKR 
_cell.length_a            41.99 
_cell.length_b            76.76 
_cell.length_c            148.12 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6TKR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 159 AAA CYS 1081 1_555 D ZN ZN . AAA ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? 
metalc ? metalc2 A ND1 HIS 162 AAA HIS 1084 1_555 D ZN ZN . AAA ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? 
metalc ? metalc3 A SG CYS 167 AAA CYS 1089 1_555 D ZN ZN . AAA ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? 
metalc ? metalc4 A SG CYS 170 AAA CYS 1092 1_555 D ZN ZN . AAA ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? 
metalc ? metalc5 B SG CYS 159 BBB CYS 1081 1_555 F ZN ZN . BBB ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? 
metalc ? metalc6 B ND1 HIS 162 BBB HIS 1084 1_555 F ZN ZN . BBB ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc7 B SG CYS 167 BBB CYS 1089 1_555 F ZN ZN . BBB ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? 
metalc ? metalc8 B SG CYS 170 BBB CYS 1092 1_555 F ZN ZN . BBB ZN 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? 
#
_chem_comp.formula           'C28 H24 F N7 O2' 
_chem_comp.formula_weight    509.534 
_chem_comp.id                NJK 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ~{N}-[3-[5-(5-ethoxypyridin-2-yl)-4-(2-fluorophenyl)-1,2,4-triazol-3-yl]cyclobutyl]-1,5-naphthyridine-2-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAZ CBA NJK doub 237 n y 
CAZ NAY NJK sing 238 n y 
CBA CBB NJK sing 239 n y 
FBH CBG NJK sing 240 n n 
CBI CBG NJK doub 241 n y 
CBI CBJ NJK sing 242 n y 
NAY CAX NJK doub 243 n y 
CBB CBC NJK doub 244 n y 
CBG CBF NJK sing 245 n y 
CBJ CBK NJK doub 246 n y 
CAX CBC NJK sing 247 n y 
CAX CAW NJK sing 248 n y 
CBC NBD NJK sing 249 n y 
CAW CAV NJK doub 250 n y 
NBD CAU NJK doub 251 n y 
CAU CAV NJK sing 252 n y 
CAU CAS NJK sing 253 n n 
CBF NBE NJK sing 254 n n 
CBF CBL NJK doub 255 n y 
CBK CBL NJK sing 256 n y 
CAN CAO NJK sing 257 n n 
CAN CAM NJK sing 258 n n 
CAN CAQ NJK sing 259 n n 
CAO CAP NJK sing 260 n n 
NBE CAM NJK sing 261 n y 
NBE CAJ NJK sing 262 n y 
NAR CAS NJK sing 263 n n 
NAR CAP NJK sing 264 n n 
CAS OAT NJK doub 265 n n 
CAF CAE NJK doub 266 n y 
CAF CAG NJK sing 267 n y 
CAM NAL NJK doub 268 n y 
CAE CAD NJK sing 269 n y 
CAJ CAG NJK sing 270 n n 
CAJ NAK NJK doub 271 n y 
CAG NAH NJK doub 272 n y 
CAA CAB NJK sing 273 n n 
NAL NAK NJK sing 274 n y 
CAQ CAP NJK sing 275 n n 
CAD OAC NJK sing 276 n n 
CAD CAI NJK doub 277 n y 
OAC CAB NJK sing 278 n n 
NAH CAI NJK sing 279 n y 
CBI HBI NJK sing 280 n n 
CBJ HBJ NJK sing 281 n n 
CBK HBK NJK sing 282 n n 
CBL HBL NJK sing 283 n n 
CAF HAG NJK sing 284 n n 
CAE HAF NJK sing 285 n n 
CAI HAI NJK sing 286 n n 
CAB HAE NJK sing 287 n n 
CAB HAD NJK sing 288 n n 
CAA HAB NJK sing 289 n n 
CAA HAC NJK sing 290 n n 
CAA HAA NJK sing 291 n n 
CAN HAN NJK sing 292 n n 
CAQ HAR NJK sing 293 n n 
CAQ HAS NJK sing 294 n n 
CAO HAO NJK sing 295 n n 
CAO HAP NJK sing 296 n n 
CAP HAQ NJK sing 297 n n 
NAR HBM NJK sing 298 n n 
CBB HBB NJK sing 299 n n 
CBA HBA NJK sing 300 n n 
CAZ HAZ NJK sing 301 n n 
CAW HAW NJK sing 302 n n 
CAV HAV NJK sing 303 n n 
#
_atom_sites.entry_id                     6TKR 
_atom_sites.fract_transf_matrix[1][1]    0.023815 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013028 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006751 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NJK AAA 1 1201 1201 NJK DRG . 
D 3 ZN AAA 1 1202 2 ZN ZN . 
E 2 NJK BBB 1 1201 1201 NJK DRG . 
F 3 ZN BBB 1 1202 1 ZN ZN . 
G 4 HOH AAA 1 1301 4 HOH HOH . 
G 4 HOH AAA 2 1302 15 HOH HOH . 
G 4 HOH AAA 3 1303 5 HOH HOH . 
G 4 HOH AAA 4 1304 1 HOH HOH . 
G 4 HOH AAA 5 1305 23 HOH HOH . 
G 4 HOH AAA 6 1306 21 HOH HOH . 
G 4 HOH AAA 7 1307 18 HOH HOH . 
G 4 HOH AAA 8 1308 27 HOH HOH . 
G 4 HOH AAA 9 1309 13 HOH HOH . 
G 4 HOH AAA 10 1310 11 HOH HOH . 
G 4 HOH AAA 11 1311 8 HOH HOH . 
G 4 HOH AAA 12 1312 6 HOH HOH . 
G 4 HOH AAA 13 1313 28 HOH HOH . 
G 4 HOH AAA 14 1314 29 HOH HOH . 
G 4 HOH AAA 15 1315 25 HOH HOH . 
G 4 HOH AAA 16 1316 26 HOH HOH . 
H 4 HOH BBB 1 1301 9 HOH HOH . 
H 4 HOH BBB 2 1302 20 HOH HOH . 
H 4 HOH BBB 3 1303 16 HOH HOH . 
H 4 HOH BBB 4 1304 22 HOH HOH . 
H 4 HOH BBB 5 1305 12 HOH HOH . 
H 4 HOH BBB 6 1306 17 HOH HOH . 
H 4 HOH BBB 7 1307 7 HOH HOH . 
H 4 HOH BBB 8 1308 24 HOH HOH . 
H 4 HOH BBB 9 1309 19 HOH HOH . 
H 4 HOH BBB 10 1310 14 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 F FBH NJK . . . E 2 -36.319 -5.538 29.998 1 40.56 ? FBH NJK 1201 BBB 1 
HETATM 2 C CBG NJK . . . E 2 -35.234 -6.016 29.294 1 41.4 ? CBG NJK 1201 BBB 1 
HETATM 3 C CBI NJK . . . E 2 -34.45 -7.023 29.834 1 43.12 ? CBI NJK 1201 BBB 1 
HETATM 4 C CBJ NJK . . . E 2 -33.342 -7.501 29.14 1 43.9 ? CBJ NJK 1201 BBB 1 
HETATM 5 C CBK NJK . . . E 2 -33.021 -6.985 27.896 1 44.02 ? CBK NJK 1201 BBB 1 
HETATM 6 C CBL NJK . . . E 2 -33.804 -5.976 27.352 1 43.98 ? CBL NJK 1201 BBB 1 
HETATM 7 C CBF NJK . . . E 2 -34.9 -5.492 28.056 1 41.84 ? CBF NJK 1201 BBB 1 
HETATM 8 N NBE NJK . . . E 2 -35.649 -4.551 27.521 1 39.58 ? NBE NJK 1201 BBB 1 
HETATM 9 C CAJ NJK . . . E 2 -36.859 -4.717 27.036 1 38.73 ? CAJ NJK 1201 BBB 1 
HETATM 10 C CAG NJK . . . E 2 -37.599 -5.825 26.917 1 40.76 ? CAG NJK 1201 BBB 1 
HETATM 11 C CAF NJK . . . E 2 -38.84 -5.874 27.546 1 41.44 ? CAF NJK 1201 BBB 1 
HETATM 12 C CAE NJK . . . E 2 -39.675 -6.981 27.375 1 42.75 ? CAE NJK 1201 BBB 1 
HETATM 13 N NAH NJK . . . E 2 -37.22 -6.853 26.138 1 42.44 ? NAH NJK 1201 BBB 1 
HETATM 14 C CAI NJK . . . E 2 -38.049 -7.974 25.951 1 44.07 ? CAI NJK 1201 BBB 1 
HETATM 15 C CAD NJK . . . E 2 -39.275 -8.044 26.58 1 44.85 ? CAD NJK 1201 BBB 1 
HETATM 16 O OAC NJK . . . E 2 -40.067 -9.124 26.357 1 50.93 ? OAC NJK 1201 BBB 1 
HETATM 17 C CAB NJK . . . E 2 -40.505 -9.938 27.411 1 53.85 ? CAB NJK 1201 BBB 1 
HETATM 18 C CAA NJK . . . E 2 -40.927 -11.243 26.709 1 55.42 ? CAA NJK 1201 BBB 1 
HETATM 19 N NAK NJK . . . E 2 -37.293 -3.536 26.581 1 36.94 ? NAK NJK 1201 BBB 1 
HETATM 20 N NAL NJK . . . E 2 -36.422 -2.666 26.786 1 37.19 ? NAL NJK 1201 BBB 1 
HETATM 21 C CAM NJK . . . E 2 -35.388 -3.263 27.365 1 37.41 ? CAM NJK 1201 BBB 1 
HETATM 22 C CAN NJK . . . E 2 -34.122 -2.605 27.836 1 36.96 ? CAN NJK 1201 BBB 1 
HETATM 23 C CAQ NJK . . . E 2 -32.908 -3.076 27.078 1 37.56 ? CAQ NJK 1201 BBB 1 
HETATM 24 C CAO NJK . . . E 2 -33.97 -1.176 27.376 1 37.24 ? CAO NJK 1201 BBB 1 
HETATM 25 C CAP NJK . . . E 2 -32.657 -1.578 26.703 1 38.27 ? CAP NJK 1201 BBB 1 
HETATM 26 N NAR NJK . . . E 2 -31.4 -1.015 27.32 1 37.18 ? NAR NJK 1201 BBB 1 
HETATM 27 C CAS NJK . . . E 2 -31.114 0.315 27.365 1 36.73 ? CAS NJK 1201 BBB 1 
HETATM 28 O OAT NJK . . . E 2 -31.857 1.184 26.902 1 35.67 ? OAT NJK 1201 BBB 1 
HETATM 29 C CAU NJK . . . E 2 -29.854 0.664 27.886 1 37.23 ? CAU NJK 1201 BBB 1 
HETATM 30 N NBD NJK . . . E 2 -29.062 -0.242 28.497 1 38.78 ? NBD NJK 1201 BBB 1 
HETATM 31 C CBC NJK . . . E 2 -27.833 0.075 28.974 1 37.05 ? CBC NJK 1201 BBB 1 
HETATM 32 C CBB NJK . . . E 2 -27.052 -0.907 29.58 1 35.64 ? CBB NJK 1201 BBB 1 
HETATM 33 C CBA NJK . . . E 2 -25.796 -0.585 30.06 1 36.85 ? CBA NJK 1201 BBB 1 
HETATM 34 C CAZ NJK . . . E 2 -25.328 0.724 29.944 1 39.49 ? CAZ NJK 1201 BBB 1 
HETATM 35 N NAY NJK . . . E 2 -26.128 1.7 29.324 1 39.6 ? NAY NJK 1201 BBB 1 
HETATM 36 C CAX NJK . . . E 2 -27.343 1.372 28.854 1 37.06 ? CAX NJK 1201 BBB 1 
HETATM 37 C CAW NJK . . . E 2 -28.13 2.335 28.25 1 37.06 ? CAW NJK 1201 BBB 1 
HETATM 38 C CAV NJK . . . E 2 -29.381 1.971 27.759 1 37.58 ? CAV NJK 1201 BBB 1 
HETATM 39 H HBI NJK . . . E 2 -34.692 -7.431 30.815 1 42.86 ? HBI NJK 1201 BBB 1 
HETATM 40 H HBJ NJK . . . E 2 -32.731 -8.292 29.574 1 43.61 ? HBJ NJK 1201 BBB 1 
HETATM 41 H HBK NJK . . . E 2 -32.157 -7.365 27.351 1 43.88 ? HBK NJK 1201 BBB 1 
HETATM 42 H HBL NJK . . . E 2 -33.552 -5.579 26.376 1 43.39 ? HBL NJK 1201 BBB 1 
HETATM 43 H HAG NJK . . . E 2 -39.17 -5.037 28.162 1 41.73 ? HAG NJK 1201 BBB 1 
HETATM 44 H HAF NJK . . . E 2 -40.643 -7.009 27.87 1 42.97 ? HAF NJK 1201 BBB 1 
HETATM 45 H HAI NJK . . . E 2 -37.718 -8.796 25.316 1 43.76 ? HAI NJK 1201 BBB 1 
HETATM 46 H HAE NJK . . . E 2 -39.762 -10.26 28.079 1 53.57 ? HAE NJK 1201 BBB 1 
HETATM 47 H HAD NJK . . . E 2 -41.354 -9.463 27.851 1 53.53 ? HAD NJK 1201 BBB 1 
HETATM 48 H HAB NJK . . . E 2 -40.641 -11.21 25.65 1 55.07 ? HAB NJK 1201 BBB 1 
HETATM 49 H HAC NJK . . . E 2 -42.006 -11.371 26.798 1 55.11 ? HAC NJK 1201 BBB 1 
HETATM 50 H HAA NJK . . . E 2 -40.422 -12.09 27.185 1 54.99 ? HAA NJK 1201 BBB 1 
HETATM 51 H HAN NJK . . . E 2 -33.987 -2.701 28.904 1 37.28 ? HAN NJK 1201 BBB 1 
HETATM 52 H HAR NJK . . . E 2 -33.026 -3.59 26.135 1 37.6 ? HAR NJK 1201 BBB 1 
HETATM 53 H HAS NJK . . . E 2 -32.027 -3.311 27.626 1 37.58 ? HAS NJK 1201 BBB 1 
HETATM 54 H HAO NJK . . . E 2 -33.84 -0.488 28.215 1 37.42 ? HAO NJK 1201 BBB 1 
HETATM 55 H HAP NJK . . . E 2 -34.735 -0.851 26.671 1 37.41 ? HAP NJK 1201 BBB 1 
HETATM 56 H HAQ NJK . . . E 2 -32.713 -1.434 25.624 1 37.72 ? HAQ NJK 1201 BBB 1 
HETATM 57 H HBM NJK . . . E 2 -30.719 -1.66 27.67 1 37.3 ? HBM NJK 1201 BBB 1 
HETATM 58 H HBB NJK . . . E 2 -27.424 -1.927 29.667 1 36.45 ? HBB NJK 1201 BBB 1 
HETATM 59 H HBA NJK . . . E 2 -25.185 -1.344 30.549 1 37.2 ? HBA NJK 1201 BBB 1 
HETATM 60 H HAZ NJK . . . E 2 -24.345 0.99 30.334 1 38.67 ? HAZ NJK 1201 BBB 1 
HETATM 61 H HAW NJK . . . E 2 -27.77 3.359 28.144 1 37.22 ? HAW NJK 1201 BBB 1 
HETATM 62 H HAV NJK . . . E 2 -29.999 2.728 27.28 1 37.39 ? HAV NJK 1201 BBB 1 
#
_model_server_stats.io_time_ms              76 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           62 
#