data_6TLB # _model_server_result.job_id jITI3u_1AXa376znsAiZkA _model_server_result.datetime_utc '2024-10-19 19:38:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tlb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":303}' # _entry.id 6TLB # loop_ _exptl.entry_id _exptl.method 6TLB 'X-RAY DIFFRACTION' 6TLB 'SOLUTION SCATTERING' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.35 _cell.angle_gamma 90 _cell.entry_id 6TLB _cell.length_a 63.993 _cell.length_b 92.25 _cell.length_c 214.502 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TLB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression B,D,F,H,I,J,K,M,O 1 1 A,C,E,G,L,N 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_455 x-1,y,z 1 0 0 0 1 0 0 0 1 -63.993 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 J N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 47 A CYS 47 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? disulf ? disulf2 A SG CYS 49 A CYS 49 1_555 A SG CYS 195 A CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? disulf ? disulf3 B SG CYS 47 B CYS 47 1_555 B SG CYS 72 B CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? disulf ? disulf4 B SG CYS 49 B CYS 49 1_555 B SG CYS 195 B CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? disulf ? disulf5 C SG CYS 47 C CYS 47 1_555 C SG CYS 72 C CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? disulf ? disulf6 D SG CYS 47 D CYS 47 1_555 D SG CYS 72 D CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? disulf ? disulf7 D SG CYS 49 D CYS 49 1_555 D SG CYS 195 D CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6TLB _atom_sites.fract_transf_matrix[1][1] 0.015627 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002294 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01084 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004712 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GOL A 1 401 401 GOL GOL . F 3 NA B 1 401 401 NA NA . G 2 GOL C 1 201 201 GOL GOL . H 2 GOL D 1 301 301 GOL GOL . I 2 GOL D 1 302 501 GOL GOL . J 3 NA D 1 303 1101 NA NA . K 3 NA D 1 304 1201 NA NA . L 4 HOH A 1 501 44 HOH HOH . L 4 HOH A 2 502 15 HOH HOH . L 4 HOH A 3 503 30 HOH HOH . L 4 HOH A 4 504 11 HOH HOH . L 4 HOH A 5 505 12 HOH HOH . L 4 HOH A 6 506 1 HOH HOH . L 4 HOH A 7 507 52 HOH HOH . L 4 HOH A 8 508 21 HOH HOH . L 4 HOH A 9 509 31 HOH HOH . L 4 HOH A 10 510 53 HOH HOH . L 4 HOH A 11 511 28 HOH HOH . L 4 HOH A 12 512 55 HOH HOH . M 4 HOH B 1 501 4 HOH HOH . M 4 HOH B 2 502 3 HOH HOH . M 4 HOH B 3 503 10 HOH HOH . M 4 HOH B 4 504 25 HOH HOH . M 4 HOH B 5 505 16 HOH HOH . M 4 HOH B 6 506 22 HOH HOH . M 4 HOH B 7 507 18 HOH HOH . M 4 HOH B 8 508 43 HOH HOH . N 4 HOH C 1 301 9 HOH HOH . N 4 HOH C 2 302 34 HOH HOH . N 4 HOH C 3 303 2 HOH HOH . N 4 HOH C 4 304 36 HOH HOH . N 4 HOH C 5 305 14 HOH HOH . N 4 HOH C 6 306 39 HOH HOH . N 4 HOH C 7 307 33 HOH HOH . N 4 HOH C 8 308 27 HOH HOH . N 4 HOH C 9 309 8 HOH HOH . N 4 HOH C 10 310 23 HOH HOH . N 4 HOH C 11 311 32 HOH HOH . N 4 HOH C 12 312 35 HOH HOH . N 4 HOH C 13 313 26 HOH HOH . O 4 HOH D 1 401 50 HOH HOH . O 4 HOH D 2 402 13 HOH HOH . O 4 HOH D 3 403 20 HOH HOH . O 4 HOH D 4 404 19 HOH HOH . O 4 HOH D 5 405 47 HOH HOH . O 4 HOH D 6 406 45 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x -23.641 _atom_site.Cartn_y 61.089 _atom_site.Cartn_z -40.6 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 303 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #