data_6TM6 # _model_server_result.job_id sQB1rJkuxFVzQnDnF9-EbQ _model_server_result.datetime_utc '2024-11-05 01:52:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tm6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1401}' # _entry.id 6TM6 # _exptl.entry_id 6TM6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TM6 _cell.length_a 54.879 _cell.length_b 57.854 _cell.length_c 27.471 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TM6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 1302 1_555 A SG CYS 96 A CYS 1395 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.806 ? disulf ? disulf2 A SG CYS 4 A CYS 1303 1_555 A SG CYS 90 A CYS 1389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 31 A CYS 1330 1_555 A SG CYS 89 A CYS 1388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf4 A SG CYS 39 A CYS 1338 1_555 A SG CYS 58 A CYS 1357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf5 A SG CYS 66 A CYS 1365 1_555 A SG CYS 80 A CYS 1379 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc1 A OD1 ASN 11 A ASN 1310 1_555 B CA CA . A CA 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc2 A O ASP 13 A ASP 1312 1_555 B CA CA . A CA 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc3 A OD1 ASP 13 A ASP 1312 1_555 C CA CA . A CA 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc4 A O HIS 14 A HIS 1313 1_555 C CA CA . A CA 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc5 A O SER 17 A SER 1316 1_555 C CA CA . A CA 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc6 A OD1 ASP 20 A ASP 1319 1_555 C CA CA . A CA 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc7 A O GLY 22 A GLY 1321 1_555 C CA CA . A CA 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc8 A OD1 ASP 23 A ASP 1322 1_555 B CA CA . A CA 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? metalc ? metalc9 A OD2 ASP 23 A ASP 1322 1_555 B CA CA . A CA 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc10 A OE2 GLU 25 A GLU 1324 1_555 B CA CA . A CA 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc11 A OD1 ASP 82 A ASP 1381 1_555 B CA CA . A CA 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc12 A O TYR 83 A TYR 1382 1_555 B CA CA . A CA 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc13 C CA CA . A CA 1402 1_555 D O HOH . A HOH 1541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6TM6 _atom_sites.fract_transf_matrix[1][1] 0.018222 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017285 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.036402 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 1401 1 CA CA . C 2 CA A 1 1402 2 CA CA . D 3 HOH A 1 1501 86 HOH HOH . D 3 HOH A 2 1502 109 HOH HOH . D 3 HOH A 3 1503 84 HOH HOH . D 3 HOH A 4 1504 58 HOH HOH . D 3 HOH A 5 1505 36 HOH HOH . D 3 HOH A 6 1506 71 HOH HOH . D 3 HOH A 7 1507 78 HOH HOH . D 3 HOH A 8 1508 88 HOH HOH . D 3 HOH A 9 1509 38 HOH HOH . D 3 HOH A 10 1510 17 HOH HOH . D 3 HOH A 11 1511 37 HOH HOH . D 3 HOH A 12 1512 30 HOH HOH . D 3 HOH A 13 1513 69 HOH HOH . D 3 HOH A 14 1514 10 HOH HOH . D 3 HOH A 15 1515 66 HOH HOH . D 3 HOH A 16 1516 32 HOH HOH . D 3 HOH A 17 1517 22 HOH HOH . D 3 HOH A 18 1518 7 HOH HOH . D 3 HOH A 19 1519 13 HOH HOH . D 3 HOH A 20 1520 33 HOH HOH . D 3 HOH A 21 1521 16 HOH HOH . D 3 HOH A 22 1522 96 HOH HOH . D 3 HOH A 23 1523 21 HOH HOH . D 3 HOH A 24 1524 49 HOH HOH . D 3 HOH A 25 1525 57 HOH HOH . D 3 HOH A 26 1526 2 HOH HOH . D 3 HOH A 27 1527 65 HOH HOH . D 3 HOH A 28 1528 83 HOH HOH . D 3 HOH A 29 1529 41 HOH HOH . D 3 HOH A 30 1530 12 HOH HOH . D 3 HOH A 31 1531 4 HOH HOH . D 3 HOH A 32 1532 28 HOH HOH . D 3 HOH A 33 1533 3 HOH HOH . D 3 HOH A 34 1534 68 HOH HOH . D 3 HOH A 35 1535 31 HOH HOH . D 3 HOH A 36 1536 82 HOH HOH . D 3 HOH A 37 1537 8 HOH HOH . D 3 HOH A 38 1538 14 HOH HOH . D 3 HOH A 39 1539 47 HOH HOH . D 3 HOH A 40 1540 97 HOH HOH . D 3 HOH A 41 1541 5 HOH HOH . D 3 HOH A 42 1542 34 HOH HOH . D 3 HOH A 43 1543 73 HOH HOH . D 3 HOH A 44 1544 18 HOH HOH . D 3 HOH A 45 1545 25 HOH HOH . D 3 HOH A 46 1546 63 HOH HOH . D 3 HOH A 47 1547 55 HOH HOH . D 3 HOH A 48 1548 95 HOH HOH . D 3 HOH A 49 1549 6 HOH HOH . D 3 HOH A 50 1550 48 HOH HOH . D 3 HOH A 51 1551 9 HOH HOH . D 3 HOH A 52 1552 20 HOH HOH . D 3 HOH A 53 1553 60 HOH HOH . D 3 HOH A 54 1554 1 HOH HOH . D 3 HOH A 55 1555 27 HOH HOH . D 3 HOH A 56 1556 23 HOH HOH . D 3 HOH A 57 1557 59 HOH HOH . D 3 HOH A 58 1558 15 HOH HOH . D 3 HOH A 59 1559 64 HOH HOH . D 3 HOH A 60 1560 24 HOH HOH . D 3 HOH A 61 1561 35 HOH HOH . D 3 HOH A 62 1562 29 HOH HOH . D 3 HOH A 63 1563 42 HOH HOH . D 3 HOH A 64 1564 40 HOH HOH . D 3 HOH A 65 1565 19 HOH HOH . D 3 HOH A 66 1566 108 HOH HOH . D 3 HOH A 67 1567 72 HOH HOH . D 3 HOH A 68 1568 46 HOH HOH . D 3 HOH A 69 1569 51 HOH HOH . D 3 HOH A 70 1570 54 HOH HOH . D 3 HOH A 71 1571 39 HOH HOH . D 3 HOH A 72 1572 45 HOH HOH . D 3 HOH A 73 1573 44 HOH HOH . D 3 HOH A 74 1574 87 HOH HOH . D 3 HOH A 75 1575 89 HOH HOH . D 3 HOH A 76 1576 56 HOH HOH . D 3 HOH A 77 1577 107 HOH HOH . D 3 HOH A 78 1578 104 HOH HOH . D 3 HOH A 79 1579 110 HOH HOH . D 3 HOH A 80 1580 80 HOH HOH . D 3 HOH A 81 1581 74 HOH HOH . D 3 HOH A 82 1582 99 HOH HOH . D 3 HOH A 83 1583 101 HOH HOH . D 3 HOH A 84 1584 114 HOH HOH . D 3 HOH A 85 1585 50 HOH HOH . D 3 HOH A 86 1586 76 HOH HOH . D 3 HOH A 87 1587 103 HOH HOH . D 3 HOH A 88 1588 26 HOH HOH . D 3 HOH A 89 1589 53 HOH HOH . D 3 HOH A 90 1590 90 HOH HOH . D 3 HOH A 91 1591 75 HOH HOH . D 3 HOH A 92 1592 79 HOH HOH . D 3 HOH A 93 1593 98 HOH HOH . D 3 HOH A 94 1594 11 HOH HOH . D 3 HOH A 95 1595 85 HOH HOH . D 3 HOH A 96 1596 91 HOH HOH . D 3 HOH A 97 1597 81 HOH HOH . D 3 HOH A 98 1598 93 HOH HOH . D 3 HOH A 99 1599 61 HOH HOH . D 3 HOH A 100 1600 92 HOH HOH . D 3 HOH A 101 1601 77 HOH HOH . D 3 HOH A 102 1602 106 HOH HOH . D 3 HOH A 103 1603 94 HOH HOH . D 3 HOH A 104 1604 67 HOH HOH . D 3 HOH A 105 1605 112 HOH HOH . D 3 HOH A 106 1606 70 HOH HOH . D 3 HOH A 107 1607 43 HOH HOH . D 3 HOH A 108 1608 102 HOH HOH . D 3 HOH A 109 1609 62 HOH HOH . D 3 HOH A 110 1610 111 HOH HOH . D 3 HOH A 111 1611 52 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 25.539 _atom_site.Cartn_y 16.399 _atom_site.Cartn_z 13.677 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.42 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #