data_6TMG # _model_server_result.job_id QUC40tJRAIZhpB915YCa9A _model_server_result.datetime_utc '2024-11-04 22:36:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tmg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"BC","auth_seq_id":101}' # _entry.id 6TMG # _exptl.entry_id 6TMG _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 510.615 _entity.id 26 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TMG _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TMG _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 48-meric _pdbx_struct_assembly.oligomeric_count 48 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC,IC,JC,KC,LC,MC,NC _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 26 XA N N ? 26 DB N N ? 26 GB N N ? 26 KB N N ? 26 MB N N ? 26 OB N N ? 26 QB N N ? 26 SB N N ? 26 YB N N ? 26 BC N N ? 26 HC N N ? 26 JC N N ? 26 LC N N ? 26 NC N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 193 i CYS 193 1_555 B SG CYS 225 i CYS 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 203 i CYS 203 1_555 B SG CYS 213 i CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 D SG CYS 200 g CYS 200 1_555 D SG CYS 212 g CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 E SG CYS 125 o CYS 125 1_555 E SG CYS 144 o CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 J SG CYS 168 h CYS 168 1_555 J SG CYS 205 h CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 Q SG CYS 129 l CYS 129 1_555 Q SG CYS 165 l CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf7 U SG CYS 14 n CYS 14 1_555 U SG CYS 46 n CYS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf8 Z SG CYS 193 I CYS 193 1_555 Z SG CYS 225 I CYS 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf9 Z SG CYS 203 I CYS 203 1_555 Z SG CYS 213 I CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf10 BA SG CYS 200 G CYS 200 1_555 BA SG CYS 212 G CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf11 CA SG CYS 125 O CYS 125 1_555 CA SG CYS 144 O CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf12 HA SG CYS 168 H CYS 168 1_555 HA SG CYS 205 H CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf13 OA SG CYS 129 L CYS 129 1_555 OA SG CYS 165 L CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf14 SA SG CYS 14 N CYS 14 1_555 SA SG CYS 46 N CYS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? covale ? covale1 E NH2 ARG 15 o ARG 15 1_555 ZA O12 PC1 . o PC1 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.299 ? covale ? covale2 CA NH2 ARG 15 O ARG 15 1_555 UB O12 PC1 . O PC1 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.295 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6TMG _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code WA 25 PC1 o 1 201 900 PC1 PC1 . XA 26 LMT o 1 202 901 LMT LMT . YA 27 CDL o 1 203 904 CDL CDL . ZA 25 PC1 o 1 204 907 PC1 PC1 . AB 28 PEE j 1 301 905 PEE PEE . BB 28 PEE j 1 302 912 PEE PEE . CB 27 CDL u 1 201 909 CDL CDL . DB 26 LMT h 1 301 908 LMT LMT . EB 27 CDL h 1 302 913 CDL CDL . FB 27 CDL e 1 401 921 CDL CDL . GB 26 LMT x 1 101 911 LMT LMT . HB 27 CDL b 1 601 914 CDL CDL . IB 27 CDL v 1 201 910 CDL CDL . JB 25 PC1 v 1 202 918 PC1 PC1 . KB 26 LMT c 1 401 915 LMT LMT . LB 28 PEE c 1 402 917 PEE PEE . MB 26 LMT c 1 403 919 LMT LMT . NB 27 CDL c 1 404 920 CDL CDL . OB 26 LMT d 1 401 902 LMT LMT . PB 27 CDL d 1 402 903 CDL CDL . QB 26 LMT d 1 403 916 LMT LMT . RB 25 PC1 O 1 201 900 PC1 PC1 . SB 26 LMT O 1 202 901 LMT LMT . TB 27 CDL O 1 203 904 CDL CDL . UB 25 PC1 O 1 204 907 PC1 PC1 . VB 28 PEE J 1 301 905 PEE PEE . WB 28 PEE J 1 302 912 PEE PEE . XB 27 CDL U 1 201 909 CDL CDL . YB 26 LMT H 1 301 908 LMT LMT . ZB 27 CDL H 1 302 913 CDL CDL . AC 27 CDL E 1 401 921 CDL CDL . BC 26 LMT X 1 101 911 LMT LMT . CC 27 CDL B 1 601 906 CDL CDL . DC 27 CDL B 1 602 914 CDL CDL . EC 27 CDL V 1 201 906 CDL CDL . FC 27 CDL V 1 202 910 CDL CDL . GC 25 PC1 V 1 203 918 PC1 PC1 . HC 26 LMT C 1 401 915 LMT LMT . IC 28 PEE C 1 402 917 PEE PEE . JC 26 LMT C 1 403 919 LMT LMT . KC 27 CDL C 1 404 920 CDL CDL . LC 26 LMT D 1 401 902 LMT LMT . MC 27 CDL D 1 402 903 CDL CDL . NC 26 LMT D 1 403 916 LMT LMT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . BC 26 254.78 285.42 166.541 1 42.86 ? C1B LMT 101 X 1 HETATM 2 C C2B LMT . . . BC 26 255.209 285.029 165.135 1 42.86 ? C2B LMT 101 X 1 HETATM 3 C C3B LMT . . . BC 26 256.404 285.786 164.684 1 42.86 ? C3B LMT 101 X 1 HETATM 4 C C4B LMT . . . BC 26 256.242 287.266 164.866 1 42.86 ? C4B LMT 101 X 1 HETATM 5 C C5B LMT . . . BC 26 255.788 287.623 166.281 1 42.86 ? C5B LMT 101 X 1 HETATM 6 C C6B LMT . . . BC 26 255.538 289.097 166.374 1 42.86 ? C6B LMT 101 X 1 HETATM 7 O O1B LMT . . . BC 26 255.761 285.031 167.408 1 42.86 ? O1B LMT 101 X 1 HETATM 8 O O2B LMT . . . BC 26 255.523 283.624 165.114 1 42.86 ? O2B LMT 101 X 1 HETATM 9 O O3B LMT . . . BC 26 256.637 285.503 163.278 1 42.86 ? O3B LMT 101 X 1 HETATM 10 O O4' LMT . . . BC 26 257.494 287.907 164.612 1 42.86 ? O4' LMT 101 X 1 HETATM 11 O O5B LMT . . . BC 26 254.56 286.901 166.64 1 42.86 ? O5B LMT 101 X 1 HETATM 12 O O6B LMT . . . BC 26 256.42 289.658 167.308 1 42.86 ? O6B LMT 101 X 1 HETATM 13 C C1' LMT . . . BC 26 256.317 283.839 171.074 1 42.86 ? C1' LMT 101 X 1 HETATM 14 C C2' LMT . . . BC 26 254.92 284.39 170.879 1 42.86 ? C2' LMT 101 X 1 HETATM 15 C C3' LMT . . . BC 26 254.619 284.506 169.433 1 42.86 ? C3' LMT 101 X 1 HETATM 16 C C4' LMT . . . BC 26 255.516 285.488 168.754 1 42.86 ? C4' LMT 101 X 1 HETATM 17 C C5' LMT . . . BC 26 256.883 285.7 169.422 1 42.86 ? C5' LMT 101 X 1 HETATM 18 C C6' LMT . . . BC 26 256.837 286.988 170.172 1 42.86 ? C6' LMT 101 X 1 HETATM 19 O O1' LMT . . . BC 26 256.6 283.822 172.418 1 42.86 ? O1' LMT 101 X 1 HETATM 20 O O2' LMT . . . BC 26 253.976 283.503 171.496 1 42.86 ? O2' LMT 101 X 1 HETATM 21 O O3' LMT . . . BC 26 253.239 284.937 169.281 1 42.86 ? O3' LMT 101 X 1 HETATM 22 O O5' LMT . . . BC 26 257.359 284.633 170.345 1 42.86 ? O5' LMT 101 X 1 HETATM 23 O O6' LMT . . . BC 26 257.985 287.101 170.959 1 42.86 ? O6' LMT 101 X 1 HETATM 24 C C1 LMT . . . BC 26 257.111 285.05 172.933 1 42.86 ? C1 LMT 101 X 1 HETATM 25 C C2 LMT . . . BC 26 256.989 285.035 174.482 1 42.86 ? C2 LMT 101 X 1 HETATM 26 C C3 LMT . . . BC 26 257.577 286.339 175.081 1 42.86 ? C3 LMT 101 X 1 HETATM 27 C C4 LMT . . . BC 26 259.12 286.335 174.929 1 42.86 ? C4 LMT 101 X 1 HETATM 28 C C5 LMT . . . BC 26 259.64 287.707 174.414 1 42.86 ? C5 LMT 101 X 1 HETATM 29 C C6 LMT . . . BC 26 260.069 288.63 175.587 1 42.86 ? C6 LMT 101 X 1 HETATM 30 C C7 LMT . . . BC 26 261.178 289.576 175.058 1 42.86 ? C7 LMT 101 X 1 HETATM 31 C C8 LMT . . . BC 26 261.41 290.774 176.012 1 42.86 ? C8 LMT 101 X 1 HETATM 32 C C9 LMT . . . BC 26 262.476 291.704 175.384 1 42.86 ? C9 LMT 101 X 1 HETATM 33 C C10 LMT . . . BC 26 261.834 292.607 174.313 1 42.86 ? C10 LMT 101 X 1 HETATM 34 C C11 LMT . . . BC 26 262.927 293.225 173.42 1 42.86 ? C11 LMT 101 X 1 HETATM 35 C C12 LMT . . . BC 26 263.866 294.101 174.249 1 42.86 ? C12 LMT 101 X 1 HETATM 36 H H1B LMT . . . BC 26 253.954 284.963 166.759 1 42.86 ? H1B LMT 101 X 1 HETATM 37 H H2B LMT . . . BC 26 254.477 285.203 164.526 1 42.86 ? H2B LMT 101 X 1 HETATM 38 H H3B LMT . . . BC 26 257.171 285.49 165.197 1 42.86 ? H3B LMT 101 X 1 HETATM 39 H H4B LMT . . . BC 26 255.583 287.591 164.235 1 42.86 ? H4B LMT 101 X 1 HETATM 40 H H5B LMT . . . BC 26 256.488 287.38 166.906 1 42.86 ? H5B LMT 101 X 1 HETATM 41 H "H6'2" LMT . . . BC 26 254.624 289.252 166.66 1 42.86 ? "H6'2" LMT 101 X 1 HETATM 42 H "H6'1" LMT . . . BC 26 255.68 289.503 165.506 1 42.86 ? "H6'1" LMT 101 X 1 HETATM 43 H H2O1 LMT . . . BC 26 256.178 283.49 164.591 1 42.86 ? H2O1 LMT 101 X 1 HETATM 44 H H3O1 LMT . . . BC 26 257.418 285.184 163.177 1 42.86 ? H3O1 LMT 101 X 1 HETATM 45 H H4O1 LMT . . . BC 26 257.36 288.73 164.454 1 42.86 ? H4O1 LMT 101 X 1 HETATM 46 H H6B LMT . . . BC 26 255.976 290.038 167.925 1 42.86 ? H6B LMT 101 X 1 HETATM 47 H H1' LMT . . . BC 26 256.337 282.929 170.74 1 42.86 ? H1' LMT 101 X 1 HETATM 48 H H2' LMT . . . BC 26 254.856 285.264 171.291 1 42.86 ? H2' LMT 101 X 1 HETATM 49 H H3' LMT . . . BC 26 254.733 283.64 169.016 1 42.86 ? H3' LMT 101 X 1 HETATM 50 H H4' LMT . . . BC 26 255.061 286.343 168.733 1 42.86 ? H4' LMT 101 X 1 HETATM 51 H H5' LMT . . . BC 26 257.541 285.791 168.716 1 42.86 ? H5' LMT 101 X 1 HETATM 52 H H6D LMT . . . BC 26 256.802 287.725 169.543 1 42.86 ? H6D LMT 101 X 1 HETATM 53 H H6E LMT . . . BC 26 256.052 287.008 170.738 1 42.86 ? H6E LMT 101 X 1 HETATM 54 H H2O2 LMT . . . BC 26 253.961 283.649 172.334 1 42.86 ? H2O2 LMT 101 X 1 HETATM 55 H H3O2 LMT . . . BC 26 252.742 284.477 169.796 1 42.86 ? H3O2 LMT 101 X 1 HETATM 56 H H6' LMT . . . BC 26 258.569 286.548 170.685 1 42.86 ? H6' LMT 101 X 1 HETATM 57 H H12 LMT . . . BC 26 256.589 285.787 172.584 1 42.86 ? H12 LMT 101 X 1 HETATM 58 H H11 LMT . . . BC 26 258.037 285.152 172.669 1 42.86 ? H11 LMT 101 X 1 HETATM 59 H H22 LMT . . . BC 26 257.463 284.27 174.84 1 42.86 ? H22 LMT 101 X 1 HETATM 60 H H21 LMT . . . BC 26 256.053 284.97 174.721 1 42.86 ? H21 LMT 101 X 1 HETATM 61 H H32 LMT . . . BC 26 257.361 286.376 176.022 1 42.86 ? H32 LMT 101 X 1 HETATM 62 H H31 LMT . . . BC 26 257.197 287.106 174.629 1 42.86 ? H31 LMT 101 X 1 HETATM 63 H H42 LMT . . . BC 26 259.521 286.139 175.787 1 42.86 ? H42 LMT 101 X 1 HETATM 64 H H41 LMT . . . BC 26 259.368 285.647 174.296 1 42.86 ? H41 LMT 101 X 1 HETATM 65 H H52 LMT . . . BC 26 260.404 287.567 173.837 1 42.86 ? H52 LMT 101 X 1 HETATM 66 H H51 LMT . . . BC 26 258.945 288.144 173.899 1 42.86 ? H51 LMT 101 X 1 HETATM 67 H H62 LMT . . . BC 26 260.431 288.097 176.31 1 42.86 ? H62 LMT 101 X 1 HETATM 68 H H61 LMT . . . BC 26 259.316 289.146 175.911 1 42.86 ? H61 LMT 101 X 1 HETATM 69 H H72 LMT . . . BC 26 262.005 289.078 174.973 1 42.86 ? H72 LMT 101 X 1 HETATM 70 H H71 LMT . . . BC 26 260.93 289.912 174.185 1 42.86 ? H71 LMT 101 X 1 HETATM 71 H H82 LMT . . . BC 26 260.581 291.261 176.141 1 42.86 ? H82 LMT 101 X 1 HETATM 72 H H81 LMT . . . BC 26 261.732 290.442 176.863 1 42.86 ? H81 LMT 101 X 1 HETATM 73 H H92 LMT . . . BC 26 263.167 291.162 174.975 1 42.86 ? H92 LMT 101 X 1 HETATM 74 H H91 LMT . . . BC 26 262.865 292.26 176.076 1 42.86 ? H91 LMT 101 X 1 HETATM 75 H H102 LMT . . . BC 26 261.248 292.069 173.76 1 42.86 ? H102 LMT 101 X 1 HETATM 76 H H101 LMT . . . BC 26 261.321 293.31 174.74 1 42.86 ? H101 LMT 101 X 1 HETATM 77 H H112 LMT . . . BC 26 263.438 292.515 173.003 1 42.86 ? H112 LMT 101 X 1 HETATM 78 H H111 LMT . . . BC 26 262.51 293.766 172.732 1 42.86 ? H111 LMT 101 X 1 HETATM 79 H H123 LMT . . . BC 26 263.349 294.758 174.74 1 42.86 ? H123 LMT 101 X 1 HETATM 80 H H122 LMT . . . BC 26 264.487 294.554 173.658 1 42.86 ? H122 LMT 101 X 1 HETATM 81 H H121 LMT . . . BC 26 264.363 293.549 174.872 1 42.86 ? H121 LMT 101 X 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 414 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 81 #