data_6TMG # _model_server_result.job_id S60Bi3sprA5HdDC7gtYc2Q _model_server_result.datetime_utc '2024-11-04 22:38:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tmg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"NC","auth_seq_id":403}' # _entry.id 6TMG # _exptl.entry_id 6TMG _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 510.615 _entity.id 26 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TMG _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TMG _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 48-meric _pdbx_struct_assembly.oligomeric_count 48 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC,IC,JC,KC,LC,MC,NC _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 26 XA N N ? 26 DB N N ? 26 GB N N ? 26 KB N N ? 26 MB N N ? 26 OB N N ? 26 QB N N ? 26 SB N N ? 26 YB N N ? 26 BC N N ? 26 HC N N ? 26 JC N N ? 26 LC N N ? 26 NC N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 193 i CYS 193 1_555 B SG CYS 225 i CYS 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 203 i CYS 203 1_555 B SG CYS 213 i CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 D SG CYS 200 g CYS 200 1_555 D SG CYS 212 g CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 E SG CYS 125 o CYS 125 1_555 E SG CYS 144 o CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 J SG CYS 168 h CYS 168 1_555 J SG CYS 205 h CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 Q SG CYS 129 l CYS 129 1_555 Q SG CYS 165 l CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf7 U SG CYS 14 n CYS 14 1_555 U SG CYS 46 n CYS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf8 Z SG CYS 193 I CYS 193 1_555 Z SG CYS 225 I CYS 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf9 Z SG CYS 203 I CYS 203 1_555 Z SG CYS 213 I CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf10 BA SG CYS 200 G CYS 200 1_555 BA SG CYS 212 G CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf11 CA SG CYS 125 O CYS 125 1_555 CA SG CYS 144 O CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf12 HA SG CYS 168 H CYS 168 1_555 HA SG CYS 205 H CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf13 OA SG CYS 129 L CYS 129 1_555 OA SG CYS 165 L CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf14 SA SG CYS 14 N CYS 14 1_555 SA SG CYS 46 N CYS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? covale ? covale1 E NH2 ARG 15 o ARG 15 1_555 ZA O12 PC1 . o PC1 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.299 ? covale ? covale2 CA NH2 ARG 15 O ARG 15 1_555 UB O12 PC1 . O PC1 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.295 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6TMG _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code WA 25 PC1 o 1 201 900 PC1 PC1 . XA 26 LMT o 1 202 901 LMT LMT . YA 27 CDL o 1 203 904 CDL CDL . ZA 25 PC1 o 1 204 907 PC1 PC1 . AB 28 PEE j 1 301 905 PEE PEE . BB 28 PEE j 1 302 912 PEE PEE . CB 27 CDL u 1 201 909 CDL CDL . DB 26 LMT h 1 301 908 LMT LMT . EB 27 CDL h 1 302 913 CDL CDL . FB 27 CDL e 1 401 921 CDL CDL . GB 26 LMT x 1 101 911 LMT LMT . HB 27 CDL b 1 601 914 CDL CDL . IB 27 CDL v 1 201 910 CDL CDL . JB 25 PC1 v 1 202 918 PC1 PC1 . KB 26 LMT c 1 401 915 LMT LMT . LB 28 PEE c 1 402 917 PEE PEE . MB 26 LMT c 1 403 919 LMT LMT . NB 27 CDL c 1 404 920 CDL CDL . OB 26 LMT d 1 401 902 LMT LMT . PB 27 CDL d 1 402 903 CDL CDL . QB 26 LMT d 1 403 916 LMT LMT . RB 25 PC1 O 1 201 900 PC1 PC1 . SB 26 LMT O 1 202 901 LMT LMT . TB 27 CDL O 1 203 904 CDL CDL . UB 25 PC1 O 1 204 907 PC1 PC1 . VB 28 PEE J 1 301 905 PEE PEE . WB 28 PEE J 1 302 912 PEE PEE . XB 27 CDL U 1 201 909 CDL CDL . YB 26 LMT H 1 301 908 LMT LMT . ZB 27 CDL H 1 302 913 CDL CDL . AC 27 CDL E 1 401 921 CDL CDL . BC 26 LMT X 1 101 911 LMT LMT . CC 27 CDL B 1 601 906 CDL CDL . DC 27 CDL B 1 602 914 CDL CDL . EC 27 CDL V 1 201 906 CDL CDL . FC 27 CDL V 1 202 910 CDL CDL . GC 25 PC1 V 1 203 918 PC1 PC1 . HC 26 LMT C 1 401 915 LMT LMT . IC 28 PEE C 1 402 917 PEE PEE . JC 26 LMT C 1 403 919 LMT LMT . KC 27 CDL C 1 404 920 CDL CDL . LC 26 LMT D 1 401 902 LMT LMT . MC 27 CDL D 1 402 903 CDL CDL . NC 26 LMT D 1 403 916 LMT LMT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . NC 26 263.95 260.392 166.728 1 34.69 ? C1B LMT 403 D 1 HETATM 2 C C2B LMT . . . NC 26 263.511 261.662 166.022 1 34.69 ? C2B LMT 403 D 1 HETATM 3 C C3B LMT . . . NC 26 262.052 261.887 166.167 1 34.69 ? C3B LMT 403 D 1 HETATM 4 C C4B LMT . . . NC 26 261.264 260.687 165.745 1 34.69 ? C4B LMT 403 D 1 HETATM 5 C C5B LMT . . . NC 26 261.741 259.412 166.441 1 34.69 ? C5B LMT 403 D 1 HETATM 6 C C6B LMT . . . NC 26 260.987 258.238 165.893 1 34.69 ? C6B LMT 403 D 1 HETATM 7 O O1B LMT . . . NC 26 263.702 260.547 168.062 1 34.69 ? O1B LMT 403 D 1 HETATM 8 O O2B LMT . . . NC 26 264.223 262.775 166.595 1 34.69 ? O2B LMT 403 D 1 HETATM 9 O O3B LMT . . . NC 26 261.661 263.017 165.343 1 34.69 ? O3B LMT 403 D 1 HETATM 10 O O4' LMT . . . NC 26 259.886 260.9 166.055 1 34.69 ? O4' LMT 403 D 1 HETATM 11 O O5B LMT . . . NC 26 263.183 259.2 166.242 1 34.69 ? O5B LMT 403 D 1 HETATM 12 O O6B LMT . . . NC 26 260.364 257.553 166.945 1 34.69 ? O6B LMT 403 D 1 HETATM 13 C C1' LMT . . . NC 26 265.472 259.857 171.695 1 34.69 ? C1' LMT 403 D 1 HETATM 14 C C2' LMT . . . NC 26 266.177 260.849 170.793 1 34.69 ? C2' LMT 403 D 1 HETATM 15 C C3' LMT . . . NC 26 265.287 261.248 169.672 1 34.69 ? C3' LMT 403 D 1 HETATM 16 C C4' LMT . . . NC 26 264.765 260.073 168.912 1 34.69 ? C4' LMT 403 D 1 HETATM 17 C C5' LMT . . . NC 26 264.196 258.975 169.808 1 34.69 ? C5' LMT 403 D 1 HETATM 18 C C6' LMT . . . NC 26 263.971 257.748 168.995 1 34.69 ? C6' LMT 403 D 1 HETATM 19 O O1' LMT . . . NC 26 266.281 259.502 172.742 1 34.69 ? O1' LMT 403 D 1 HETATM 20 O O2' LMT . . . NC 26 266.535 262.012 171.554 1 34.69 ? O2' LMT 403 D 1 HETATM 21 O O3' LMT . . . NC 26 266.028 262.106 168.762 1 34.69 ? O3' LMT 403 D 1 HETATM 22 O O5' LMT . . . NC 26 265.093 258.634 170.93 1 34.69 ? O5' LMT 403 D 1 HETATM 23 O O6' LMT . . . NC 26 263.532 256.718 169.829 1 34.69 ? O6' LMT 403 D 1 HETATM 24 C C1 LMT . . . NC 26 265.729 258.431 173.504 1 34.69 ? C1 LMT 403 D 1 HETATM 25 C C2 LMT . . . NC 26 265.735 258.799 175.013 1 34.69 ? C2 LMT 403 D 1 HETATM 26 C C3 LMT . . . NC 26 264.565 258.061 175.708 1 34.69 ? C3 LMT 403 D 1 HETATM 27 C C4 LMT . . . NC 26 264.312 258.682 177.107 1 34.69 ? C4 LMT 403 D 1 HETATM 28 C C5 LMT . . . NC 26 265.447 258.253 178.078 1 34.69 ? C5 LMT 403 D 1 HETATM 29 C C6 LMT . . . NC 26 264.862 258.094 179.507 1 34.69 ? C6 LMT 403 D 1 HETATM 30 C C7 LMT . . . NC 26 264.072 256.762 179.586 1 34.69 ? C7 LMT 403 D 1 HETATM 31 C C8 LMT . . . NC 26 263.847 256.367 181.066 1 34.69 ? C8 LMT 403 D 1 HETATM 32 C C9 LMT . . . NC 26 262.807 255.226 181.136 1 34.69 ? C9 LMT 403 D 1 HETATM 33 C C10 LMT . . . NC 26 262.923 254.498 182.488 1 34.69 ? C10 LMT 403 D 1 HETATM 34 C C11 LMT . . . NC 26 262.61 255.477 183.634 1 34.69 ? C11 LMT 403 D 1 HETATM 35 C C12 LMT . . . NC 26 262.642 254.72 184.959 1 34.69 ? C12 LMT 403 D 1 HETATM 36 H H1B LMT . . . NC 26 264.892 260.257 166.556 1 34.69 ? H1B LMT 403 D 1 HETATM 37 H H2B LMT . . . NC 26 263.73 261.589 165.081 1 34.69 ? H2B LMT 403 D 1 HETATM 38 H H3B LMT . . . NC 26 261.853 262.082 167.095 1 34.69 ? H3B LMT 403 D 1 HETATM 39 H H4B LMT . . . NC 26 261.362 260.573 164.79 1 34.69 ? H4B LMT 403 D 1 HETATM 40 H H5B LMT . . . NC 26 261.567 259.49 167.39 1 34.69 ? H5B LMT 403 D 1 HETATM 41 H "H6'2" LMT . . . NC 26 260.315 258.551 165.268 1 34.69 ? "H6'2" LMT 403 D 1 HETATM 42 H "H6'1" LMT . . . NC 26 261.601 257.641 165.439 1 34.69 ? "H6'1" LMT 403 D 1 HETATM 43 H H2O1 LMT . . . NC 26 265.055 262.601 166.605 1 34.69 ? H2O1 LMT 403 D 1 HETATM 44 H H3O1 LMT . . . NC 26 260.86 263.235 165.525 1 34.69 ? H3O1 LMT 403 D 1 HETATM 45 H H4O1 LMT . . . NC 26 259.406 260.471 165.501 1 34.69 ? H4O1 LMT 403 D 1 HETATM 46 H H6B LMT . . . NC 26 260.427 256.717 166.813 1 34.69 ? H6B LMT 403 D 1 HETATM 47 H H1' LMT . . . NC 26 264.668 260.269 172.041 1 34.69 ? H1' LMT 403 D 1 HETATM 48 H H2' LMT . . . NC 26 266.977 260.439 170.432 1 34.69 ? H2' LMT 403 D 1 HETATM 49 H H3' LMT . . . NC 26 264.536 261.742 170.032 1 34.69 ? H3' LMT 403 D 1 HETATM 50 H H4' LMT . . . NC 26 265.488 259.694 168.392 1 34.69 ? H4' LMT 403 D 1 HETATM 51 H H5' LMT . . . NC 26 263.349 259.274 170.167 1 34.69 ? H5' LMT 403 D 1 HETATM 52 H H6D LMT . . . NC 26 264.8 257.486 168.567 1 34.69 ? H6D LMT 403 D 1 HETATM 53 H H6E LMT . . . NC 26 263.3 257.928 168.321 1 34.69 ? H6E LMT 403 D 1 HETATM 54 H H2O2 LMT . . . NC 26 267.36 261.973 171.755 1 34.69 ? H2O2 LMT 403 D 1 HETATM 55 H H3O2 LMT . . . NC 26 265.512 262.714 168.467 1 34.69 ? H3O2 LMT 403 D 1 HETATM 56 H H6' LMT . . . NC 26 264.135 256.122 169.882 1 34.69 ? H6' LMT 403 D 1 HETATM 57 H H12 LMT . . . NC 26 264.815 258.276 173.222 1 34.69 ? H12 LMT 403 D 1 HETATM 58 H H11 LMT . . . NC 26 266.258 257.632 173.358 1 34.69 ? H11 LMT 403 D 1 HETATM 59 H H22 LMT . . . NC 26 265.614 259.755 175.117 1 34.69 ? H22 LMT 403 D 1 HETATM 60 H H21 LMT . . . NC 26 266.575 258.537 175.42 1 34.69 ? H21 LMT 403 D 1 HETATM 61 H H32 LMT . . . NC 26 263.767 258.16 175.168 1 34.69 ? H32 LMT 403 D 1 HETATM 62 H H31 LMT . . . NC 26 264.776 257.119 175.8 1 34.69 ? H31 LMT 403 D 1 HETATM 63 H H42 LMT . . . NC 26 264.305 259.648 177.034 1 34.69 ? H42 LMT 403 D 1 HETATM 64 H H41 LMT . . . NC 26 263.456 258.384 177.452 1 34.69 ? H41 LMT 403 D 1 HETATM 65 H H52 LMT . . . NC 26 266.162 258.908 178.078 1 34.69 ? H52 LMT 403 D 1 HETATM 66 H H51 LMT . . . NC 26 265.797 257.398 177.786 1 34.69 ? H51 LMT 403 D 1 HETATM 67 H H62 LMT . . . NC 26 264.27 258.836 179.705 1 34.69 ? H62 LMT 403 D 1 HETATM 68 H H61 LMT . . . NC 26 265.579 258.076 180.159 1 34.69 ? H61 LMT 403 D 1 HETATM 69 H H72 LMT . . . NC 26 263.214 256.862 179.146 1 34.69 ? H72 LMT 403 D 1 HETATM 70 H H71 LMT . . . NC 26 264.572 256.058 179.145 1 34.69 ? H71 LMT 403 D 1 HETATM 71 H H82 LMT . . . NC 26 264.68 256.072 181.462 1 34.69 ? H82 LMT 403 D 1 HETATM 72 H H81 LMT . . . NC 26 263.516 257.133 181.561 1 34.69 ? H81 LMT 403 D 1 HETATM 73 H H92 LMT . . . NC 26 262.953 254.596 180.414 1 34.69 ? H92 LMT 403 D 1 HETATM 74 H H91 LMT . . . NC 26 261.92 255.608 181.057 1 34.69 ? H91 LMT 403 D 1 HETATM 75 H H102 LMT . . . NC 26 262.293 253.762 182.519 1 34.69 ? H102 LMT 403 D 1 HETATM 76 H H101 LMT . . . NC 26 263.819 254.148 182.595 1 34.69 ? H101 LMT 403 D 1 HETATM 77 H H112 LMT . . . NC 26 263.273 256.185 183.654 1 34.69 ? H112 LMT 403 D 1 HETATM 78 H H111 LMT . . . NC 26 261.73 255.861 183.501 1 34.69 ? H111 LMT 403 D 1 HETATM 79 H H123 LMT . . . NC 26 263.556 254.473 185.169 1 34.69 ? H123 LMT 403 D 1 HETATM 80 H H122 LMT . . . NC 26 262.292 255.292 185.658 1 34.69 ? H122 LMT 403 D 1 HETATM 81 H H121 LMT . . . NC 26 262.097 253.921 184.89 1 34.69 ? H121 LMT 403 D 1 # _model_server_stats.io_time_ms 38 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 445 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 81 #