data_6TMH
#
_model_server_result.job_id            LMKt2X6CIXjE2CkSfUVFqw 
_model_server_result.datetime_utc      '2024-10-13 04:17:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6tmh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Z","auth_seq_id":601}' 
#
_entry.id    6TMH 
#
_exptl.entry_id    6TMH 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          9 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6TMH 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6TMH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    21-meric 
_pdbx_struct_assembly.oligomeric_count      21 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 9 V N N 
? 9 X N N 
? 9 Z N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B OG1 THR 227 A THR 227 1_555 W MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.907 ? 
metalc ? metalc2 V O1G ATP . A ATP 601 1_555 W MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc3 V O1B ATP . A ATP 601 1_555 W MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? 
metalc ? metalc4 C OG1 THR 227 E THR 227 1_555 Y MG MG . E MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? 
metalc ? metalc5 X O2G ATP . E ATP 601 1_555 Y MG MG . E MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc6 X O1B ATP . E ATP 601 1_555 Y MG MG . E MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.891 ? 
metalc ? metalc7 D OG1 THR 227 C THR 227 1_555 AA MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? 
metalc ? metalc8 Z O1G ATP . C ATP 601 1_555 AA MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? 
metalc ? metalc9 Z O2B ATP . C ATP 601 1_555 AA MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? 
metalc ? metalc10 E OG1 THR 234 B THR 234 1_555 CA MG MG . B MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc11 BA O2B ADP . B ADP 601 1_555 CA MG MG . B MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.798 ? 
metalc ? metalc12 G OG1 THR 234 D THR 234 1_555 EA MG MG . D MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? 
metalc ? metalc13 DA O2B ADP . D ADP 601 1_555 EA MG MG . D MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 114 n n 
PG O2G ATP sing 115 n n 
PG O3G ATP sing 116 n n 
PG O3B ATP sing 117 n n 
O2G HOG2 ATP sing 118 n n 
O3G HOG3 ATP sing 119 n n 
PB O1B ATP doub 120 n n 
PB O2B ATP sing 121 n n 
PB O3B ATP sing 122 n n 
PB O3A ATP sing 123 n n 
O2B HOB2 ATP sing 124 n n 
PA O1A ATP doub 125 n n 
PA O2A ATP sing 126 n n 
PA O3A ATP sing 127 n n 
PA O5' ATP sing 128 n n 
O2A HOA2 ATP sing 129 n n 
O5' C5' ATP sing 130 n n 
C5' C4' ATP sing 131 n n 
C5' "H5'1" ATP sing 132 n n 
C5' "H5'2" ATP sing 133 n n 
C4' O4' ATP sing 134 n n 
C4' C3' ATP sing 135 n n 
C4' H4' ATP sing 136 n n 
O4' C1' ATP sing 137 n n 
C3' O3' ATP sing 138 n n 
C3' C2' ATP sing 139 n n 
C3' H3' ATP sing 140 n n 
O3' HO3' ATP sing 141 n n 
C2' O2' ATP sing 142 n n 
C2' C1' ATP sing 143 n n 
C2' H2' ATP sing 144 n n 
O2' HO2' ATP sing 145 n n 
C1' N9 ATP sing 146 n n 
C1' H1' ATP sing 147 n n 
N9 C8 ATP sing 148 n y 
N9 C4 ATP sing 149 n y 
C8 N7 ATP doub 150 n y 
C8 H8 ATP sing 151 n n 
N7 C5 ATP sing 152 n y 
C5 C6 ATP sing 153 n y 
C5 C4 ATP doub 154 n y 
C6 N6 ATP sing 155 n n 
C6 N1 ATP doub 156 n y 
N6 HN61 ATP sing 157 n n 
N6 HN62 ATP sing 158 n n 
N1 C2 ATP sing 159 n y 
C2 N3 ATP doub 160 n y 
C2 H2 ATP sing 161 n n 
N3 C4 ATP sing 162 n y 
#
_atom_sites.entry_id                     6TMH 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
V 9 ATP A 1 601 1 ATP ATP . 
W 10 MG A 1 602 101 MG MG . 
X 9 ATP E 1 601 1 ATP ATP . 
Y 10 MG E 1 602 101 MG MG . 
Z 9 ATP C 1 601 1 ATP ATP . 
AA 10 MG C 1 602 101 MG MG . 
BA 11 ADP B 1 601 1 ADP ADP . 
CA 10 MG B 1 602 101 MG MG . 
DA 11 ADP D 1 601 1 ADP ADP . 
EA 10 MG D 1 602 101 MG MG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . Z 9 300.901 244.802 295.425 1 29.59 ? PG ATP 601 C 1 
HETATM 2 O O1G ATP . . . Z 9 300.136 245.754 296.307 1 29.59 ? O1G ATP 601 C 1 
HETATM 3 O O2G ATP . . . Z 9 302.107 245.501 294.861 1 29.59 ? O2G ATP 601 C 1 
HETATM 4 O O3G ATP . . . Z 9 301.333 243.601 296.22 1 29.59 ? O3G ATP 601 C 1 
HETATM 5 P PB ATP . . . Z 9 298.602 245.156 293.736 1 29.59 ? PB ATP 601 C 1 
HETATM 6 O O1B ATP . . . Z 9 297.841 244.348 292.726 1 29.59 ? O1B ATP 601 C 1 
HETATM 7 O O2B ATP . . . Z 9 297.74 245.43 294.938 1 29.59 ? O2B ATP 601 C 1 
HETATM 8 O O3B ATP . . . Z 9 299.921 244.303 294.207 1 29.59 ? O3B ATP 601 C 1 
HETATM 9 P PA ATP . . . Z 9 298.173 247.909 292.818 1 29.59 ? PA ATP 601 C 1 
HETATM 10 O O1A ATP . . . Z 9 298.296 248.847 293.986 1 29.59 ? O1A ATP 601 C 1 
HETATM 11 O O2A ATP . . . Z 9 296.735 247.535 292.611 1 29.59 ? O2A ATP 601 C 1 
HETATM 12 O O3A ATP . . . Z 9 299.102 246.58 293.085 1 29.59 ? O3A ATP 601 C 1 
HETATM 13 O O5' ATP . . . Z 9 298.752 248.679 291.488 1 29.59 ? O5' ATP 601 C 1 
HETATM 14 C C5' ATP . . . Z 9 299.755 248.04 290.753 1 29.59 ? C5' ATP 601 C 1 
HETATM 15 C C4' ATP . . . Z 9 299.871 248.679 289.349 1 29.59 ? C4' ATP 601 C 1 
HETATM 16 O O4' ATP . . . Z 9 298.843 248.355 288.619 1 29.59 ? O4' ATP 601 C 1 
HETATM 17 C C3' ATP . . . Z 9 299.853 250.212 289.499 1 29.59 ? C3' ATP 601 C 1 
HETATM 18 O O3' ATP . . . Z 9 300.843 250.777 288.77 1 29.59 ? O3' ATP 601 C 1 
HETATM 19 C C2' ATP . . . Z 9 298.484 250.635 288.957 1 29.59 ? C2' ATP 601 C 1 
HETATM 20 O O2' ATP . . . Z 9 298.581 251.989 288.338 1 29.59 ? O2' ATP 601 C 1 
HETATM 21 C C1' ATP . . . Z 9 298.204 249.729 288.066 1 29.59 ? C1' ATP 601 C 1 
HETATM 22 N N9 ATP . . . Z 9 296.787 249.564 287.925 1 29.59 ? N9 ATP 601 C 1 
HETATM 23 C C8 ATP . . . Z 9 295.884 249 288.714 1 29.59 ? C8 ATP 601 C 1 
HETATM 24 N N7 ATP . . . Z 9 294.704 249.107 288.112 1 29.59 ? N7 ATP 601 C 1 
HETATM 25 C C5 ATP . . . Z 9 294.897 249.743 286.952 1 29.59 ? C5 ATP 601 C 1 
HETATM 26 C C6 ATP . . . Z 9 294.027 250.106 285.961 1 29.59 ? C6 ATP 601 C 1 
HETATM 27 N N6 ATP . . . Z 9 292.601 249.915 285.858 1 29.59 ? N6 ATP 601 C 1 
HETATM 28 N N1 ATP . . . Z 9 294.464 250.735 284.891 1 29.59 ? N1 ATP 601 C 1 
HETATM 29 C C2 ATP . . . Z 9 295.778 251.021 284.773 1 29.59 ? C2 ATP 601 C 1 
HETATM 30 N N3 ATP . . . Z 9 296.641 250.665 285.744 1 29.59 ? N3 ATP 601 C 1 
HETATM 31 C C4 ATP . . . Z 9 296.189 250.028 286.832 1 29.59 ? C4 ATP 601 C 1 
HETATM 32 H "H5'1" ATP . . . Z 9 299.536 247.102 290.658 1 29.59 ? "H5'1" ATP 601 C 1 
HETATM 33 H "H5'2" ATP . . . Z 9 300.601 248.134 291.212 1 29.59 ? "H5'2" ATP 601 C 1 
HETATM 34 H H4' ATP . . . Z 9 300.687 248.397 288.917 1 29.59 ? H4' ATP 601 C 1 
HETATM 35 H H3' ATP . . . Z 9 299.94 250.461 290.427 1 29.59 ? H3' ATP 601 C 1 
HETATM 36 H H2' ATP . . . Z 9 297.836 250.629 289.671 1 29.59 ? H2' ATP 601 C 1 
HETATM 37 H HO2' ATP . . . Z 9 298.739 252.56 288.948 1 29.59 ? HO2' ATP 601 C 1 
HETATM 38 H H1' ATP . . . Z 9 298.602 249.962 287.218 1 29.59 ? H1' ATP 601 C 1 
HETATM 39 H H8 ATP . . . Z 9 296.048 248.603 289.531 1 29.59 ? H8 ATP 601 C 1 
HETATM 40 H HN61 ATP . . . Z 9 292.116 250.538 285.527 1 29.59 ? HN61 ATP 601 C 1 
HETATM 41 H HN62 ATP . . . Z 9 292.243 249.183 286.126 1 29.59 ? HN62 ATP 601 C 1 
HETATM 42 H H2 ATP . . . Z 9 296.088 251.464 284.021 1 29.59 ? H2 ATP 601 C 1 
#
_model_server_stats.io_time_ms              49 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    83 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           42 
#