data_6TN8
#
_model_server_result.job_id            GCMmKTeaqpqy6OJaNYhM1Q 
_model_server_result.datetime_utc      '2024-10-11 00:26:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6tn8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    6TN8 
#
_exptl.entry_id    6TN8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              88.105 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '1,4-DIETHYLENE DIOXIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6TN8 
_cell.length_a            59.55 
_cell.length_b            86.54 
_cell.length_c            139.599 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6TN8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    'C 2c 2' 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
_chem_comp.formula           'C4 H8 O2' 
_chem_comp.formula_weight    88.105 
_chem_comp.id                DIO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '1,4-DIETHYLENE DIOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C1' DIO sing 134 n n 
C1 O1 DIO sing 135 n n 
C1 H11 DIO sing 136 n n 
C1 H12 DIO sing 137 n n 
C2 C2' DIO sing 138 n n 
C2 O1 DIO sing 139 n n 
C2 H21 DIO sing 140 n n 
C2 H22 DIO sing 141 n n 
C1' O1' DIO sing 142 n n 
C1' "H1'1" DIO sing 143 n n 
C1' "H1'2" DIO sing 144 n n 
C2' O1' DIO sing 145 n n 
C2' "H2'1" DIO sing 146 n n 
C2' "H2'2" DIO sing 147 n n 
#
_atom_sites.entry_id                     6TN8 
_atom_sites.fract_transf_matrix[1][1]    0.016793 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011555 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007163 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DIO A 1 501 501 DIO DOX . 
C 2 DIO A 1 502 601 DIO DOX . 
D 2 DIO A 1 503 701 DIO DOX . 
E 2 DIO A 1 504 801 DIO DOX . 
F 3 5U6 A 1 505 1 5U6 E58 . 
G 4 SO4 A 1 506 1 SO4 SO4 . 
H 4 SO4 A 1 507 2 SO4 SO4 . 
I 5 EDO A 1 508 1 EDO EDO . 
J 5 EDO A 1 509 2 EDO EDO . 
K 5 EDO A 1 510 3 EDO EDO . 
L 6 HOH A 1 601 111 HOH HOH . 
L 6 HOH A 2 602 71 HOH HOH . 
L 6 HOH A 3 603 7 HOH HOH . 
L 6 HOH A 4 604 105 HOH HOH . 
L 6 HOH A 5 605 39 HOH HOH . 
L 6 HOH A 6 606 99 HOH HOH . 
L 6 HOH A 7 607 16 HOH HOH . 
L 6 HOH A 8 608 55 HOH HOH . 
L 6 HOH A 9 609 45 HOH HOH . 
L 6 HOH A 10 610 108 HOH HOH . 
L 6 HOH A 11 611 33 HOH HOH . 
L 6 HOH A 12 612 59 HOH HOH . 
L 6 HOH A 13 613 81 HOH HOH . 
L 6 HOH A 14 614 37 HOH HOH . 
L 6 HOH A 15 615 104 HOH HOH . 
L 6 HOH A 16 616 70 HOH HOH . 
L 6 HOH A 17 617 73 HOH HOH . 
L 6 HOH A 18 618 51 HOH HOH . 
L 6 HOH A 19 619 13 HOH HOH . 
L 6 HOH A 20 620 19 HOH HOH . 
L 6 HOH A 21 621 103 HOH HOH . 
L 6 HOH A 22 622 87 HOH HOH . 
L 6 HOH A 23 623 86 HOH HOH . 
L 6 HOH A 24 624 56 HOH HOH . 
L 6 HOH A 25 625 31 HOH HOH . 
L 6 HOH A 26 626 38 HOH HOH . 
L 6 HOH A 27 627 90 HOH HOH . 
L 6 HOH A 28 628 77 HOH HOH . 
L 6 HOH A 29 629 47 HOH HOH . 
L 6 HOH A 30 630 76 HOH HOH . 
L 6 HOH A 31 631 34 HOH HOH . 
L 6 HOH A 32 632 48 HOH HOH . 
L 6 HOH A 33 633 72 HOH HOH . 
L 6 HOH A 34 634 93 HOH HOH . 
L 6 HOH A 35 635 2 HOH HOH . 
L 6 HOH A 36 636 97 HOH HOH . 
L 6 HOH A 37 637 100 HOH HOH . 
L 6 HOH A 38 638 75 HOH HOH . 
L 6 HOH A 39 639 3 HOH HOH . 
L 6 HOH A 40 640 85 HOH HOH . 
L 6 HOH A 41 641 95 HOH HOH . 
L 6 HOH A 42 642 80 HOH HOH . 
L 6 HOH A 43 643 23 HOH HOH . 
L 6 HOH A 44 644 106 HOH HOH . 
L 6 HOH A 45 645 22 HOH HOH . 
L 6 HOH A 46 646 20 HOH HOH . 
L 6 HOH A 47 647 17 HOH HOH . 
L 6 HOH A 48 648 42 HOH HOH . 
L 6 HOH A 49 649 35 HOH HOH . 
L 6 HOH A 50 650 6 HOH HOH . 
L 6 HOH A 51 651 110 HOH HOH . 
L 6 HOH A 52 652 107 HOH HOH . 
L 6 HOH A 53 653 25 HOH HOH . 
L 6 HOH A 54 654 50 HOH HOH . 
L 6 HOH A 55 655 27 HOH HOH . 
L 6 HOH A 56 656 101 HOH HOH . 
L 6 HOH A 57 657 43 HOH HOH . 
L 6 HOH A 58 658 113 HOH HOH . 
L 6 HOH A 59 659 10 HOH HOH . 
L 6 HOH A 60 660 109 HOH HOH . 
L 6 HOH A 61 661 112 HOH HOH . 
L 6 HOH A 62 662 88 HOH HOH . 
L 6 HOH A 63 663 98 HOH HOH . 
L 6 HOH A 64 664 44 HOH HOH . 
L 6 HOH A 65 665 41 HOH HOH . 
L 6 HOH A 66 666 96 HOH HOH . 
L 6 HOH A 67 667 102 HOH HOH . 
L 6 HOH A 68 668 89 HOH HOH . 
L 6 HOH A 69 669 5 HOH HOH . 
L 6 HOH A 70 670 32 HOH HOH . 
L 6 HOH A 71 671 40 HOH HOH . 
L 6 HOH A 72 672 15 HOH HOH . 
L 6 HOH A 73 673 8 HOH HOH . 
L 6 HOH A 74 674 36 HOH HOH . 
L 6 HOH A 75 675 79 HOH HOH . 
L 6 HOH A 76 676 24 HOH HOH . 
L 6 HOH A 77 677 49 HOH HOH . 
L 6 HOH A 78 678 14 HOH HOH . 
L 6 HOH A 79 679 68 HOH HOH . 
L 6 HOH A 80 680 12 HOH HOH . 
L 6 HOH A 81 681 28 HOH HOH . 
L 6 HOH A 82 682 94 HOH HOH . 
L 6 HOH A 83 683 83 HOH HOH . 
L 6 HOH A 84 684 92 HOH HOH . 
L 6 HOH A 85 685 60 HOH HOH . 
L 6 HOH A 86 686 52 HOH HOH . 
L 6 HOH A 87 687 29 HOH HOH . 
L 6 HOH A 88 688 9 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DIO . . . D 2 -58.889 198.481 174.891 0.44 47.12 ? C1 DIO 503 A 1 
HETATM 2 C C2 DIO . . . D 2 -58.844 200.718 174.234 0.44 48.35 ? C2 DIO 503 A 1 
HETATM 3 C C1' DIO . . . D 2 -60.205 198.482 174.115 0.44 47.1 ? C1' DIO 503 A 1 
HETATM 4 C C2' DIO . . . D 2 -60.268 200.721 174.772 0.44 48.31 ? C2' DIO 503 A 1 
HETATM 5 O O1 DIO . . . D 2 -58.114 199.637 174.738 0.44 48.24 ? O1 DIO 503 A 1 
HETATM 6 O O1' DIO . . . D 2 -60.993 199.627 174.293 0.44 48.27 ? O1' DIO 503 A 1 
HETATM 7 H H11 DIO . . . D 2 -59.095 198.377 175.833 0.44 56.71 ? H11 DIO 503 A 1 
HETATM 8 H H12 DIO . . . D 2 -58.363 197.722 174.593 0.44 56.71 ? H12 DIO 503 A 1 
HETATM 9 H H21 DIO . . . D 2 -58.405 201.544 174.491 0.44 58.18 ? H21 DIO 503 A 1 
HETATM 10 H H22 DIO . . . D 2 -58.871 200.658 173.266 0.44 58.18 ? H22 DIO 503 A 1 
HETATM 11 H "H1'1" DIO . . . D 2 -59.999 198.401 173.171 0.44 56.69 ? "H1'1" DIO 503 A 1 
HETATM 12 H "H1'2" DIO . . . D 2 -60.723 197.712 174.396 0.44 56.69 ? "H1'2" DIO 503 A 1 
HETATM 13 H "H2'1" DIO . . . D 2 -60.24 200.684 175.74 0.44 58.13 ? "H2'1" DIO 503 A 1 
HETATM 14 H "H2'2" DIO . . . D 2 -60.709 201.54 174.495 0.44 58.13 ? "H2'2" DIO 503 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           335 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           14 
#