data_6TNM # _model_server_result.job_id bNMm_kWgxe7mQnp7-UnGew _model_server_result.datetime_utc '2024-12-21 12:59:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tnm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 6TNM # _exptl.entry_id 6TNM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TNM _cell.length_a 130.384 _cell.length_b 214.113 _cell.length_c 76.52 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TNM _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 178 n n C1 C2 GOL sing 179 n n C1 H11 GOL sing 180 n n C1 H12 GOL sing 181 n n O1 HO1 GOL sing 182 n n C2 O2 GOL sing 183 n n C2 C3 GOL sing 184 n n C2 H2 GOL sing 185 n n O2 HO2 GOL sing 186 n n C3 O3 GOL sing 187 n n C3 H31 GOL sing 188 n n C3 H32 GOL sing 189 n n O3 HO3 GOL sing 190 n n # _atom_sites.entry_id 6TNM _atom_sites.fract_transf_matrix[1][1] 0.00767 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00467 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013068 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 801 1 GOL GOL . C 3 ATP A 1 802 1 ATP ATP . D 4 NO3 A 1 803 1 NO3 NO3 . E 4 NO3 A 1 804 2 NO3 NO3 . F 4 NO3 A 1 805 3 NO3 NO3 . G 4 NO3 A 1 806 4 NO3 NO3 . H 4 NO3 A 1 807 5 NO3 NO3 . I 4 NO3 A 1 808 6 NO3 NO3 . J 4 NO3 A 1 809 7 NO3 NO3 . K 5 HOH A 1 901 34 HOH HOH . K 5 HOH A 2 902 2 HOH HOH . K 5 HOH A 3 903 35 HOH HOH . K 5 HOH A 4 904 15 HOH HOH . K 5 HOH A 5 905 24 HOH HOH . K 5 HOH A 6 906 3 HOH HOH . K 5 HOH A 7 907 41 HOH HOH . K 5 HOH A 8 908 43 HOH HOH . K 5 HOH A 9 909 26 HOH HOH . K 5 HOH A 10 910 38 HOH HOH . K 5 HOH A 11 911 7 HOH HOH . K 5 HOH A 12 912 11 HOH HOH . K 5 HOH A 13 913 12 HOH HOH . K 5 HOH A 14 914 6 HOH HOH . K 5 HOH A 15 915 5 HOH HOH . K 5 HOH A 16 916 22 HOH HOH . K 5 HOH A 17 917 19 HOH HOH . K 5 HOH A 18 918 8 HOH HOH . K 5 HOH A 19 919 1 HOH HOH . K 5 HOH A 20 920 4 HOH HOH . K 5 HOH A 21 921 21 HOH HOH . K 5 HOH A 22 922 23 HOH HOH . K 5 HOH A 23 923 45 HOH HOH . K 5 HOH A 24 924 9 HOH HOH . K 5 HOH A 25 925 37 HOH HOH . K 5 HOH A 26 926 42 HOH HOH . K 5 HOH A 27 927 40 HOH HOH . K 5 HOH A 28 928 14 HOH HOH . K 5 HOH A 29 929 44 HOH HOH . K 5 HOH A 30 930 18 HOH HOH . K 5 HOH A 31 931 16 HOH HOH . K 5 HOH A 32 932 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 35.209 46.638 -3.567 1 26.75 ? C1 GOL 801 A 1 HETATM 2 O O1 GOL . . . B 2 34.696 45.588 -2.81 1 26.93 ? O1 GOL 801 A 1 HETATM 3 C C2 GOL . . . B 2 36.187 46.018 -4.588 1 32.88 ? C2 GOL 801 A 1 HETATM 4 O O2 GOL . . . B 2 35.606 44.98 -5.3 1 32.29 ? O2 GOL 801 A 1 HETATM 5 C C3 GOL . . . B 2 36.597 47.196 -5.501 1 34.71 ? C3 GOL 801 A 1 HETATM 6 O O3 GOL . . . B 2 37.41 46.666 -6.499 1 34.74 ? O3 GOL 801 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #