data_6TNM
#
_model_server_result.job_id            -8VSo46NqCWZ8rxRXOdBBg 
_model_server_result.datetime_utc      '2024-12-21 12:52:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6tnm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":802}' 
#
_entry.id    6TNM 
#
_exptl.entry_id    6TNM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6TNM 
_cell.length_a            130.384 
_cell.length_b            214.113 
_cell.length_c            76.52 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6TNM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    'C 2c 2' 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     6TNM 
_atom_sites.fract_transf_matrix[1][1]    0.00767 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00467 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013068 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 801 1 GOL GOL . 
C 3 ATP A 1 802 1 ATP ATP . 
D 4 NO3 A 1 803 1 NO3 NO3 . 
E 4 NO3 A 1 804 2 NO3 NO3 . 
F 4 NO3 A 1 805 3 NO3 NO3 . 
G 4 NO3 A 1 806 4 NO3 NO3 . 
H 4 NO3 A 1 807 5 NO3 NO3 . 
I 4 NO3 A 1 808 6 NO3 NO3 . 
J 4 NO3 A 1 809 7 NO3 NO3 . 
K 5 HOH A 1 901 34 HOH HOH . 
K 5 HOH A 2 902 2 HOH HOH . 
K 5 HOH A 3 903 35 HOH HOH . 
K 5 HOH A 4 904 15 HOH HOH . 
K 5 HOH A 5 905 24 HOH HOH . 
K 5 HOH A 6 906 3 HOH HOH . 
K 5 HOH A 7 907 41 HOH HOH . 
K 5 HOH A 8 908 43 HOH HOH . 
K 5 HOH A 9 909 26 HOH HOH . 
K 5 HOH A 10 910 38 HOH HOH . 
K 5 HOH A 11 911 7 HOH HOH . 
K 5 HOH A 12 912 11 HOH HOH . 
K 5 HOH A 13 913 12 HOH HOH . 
K 5 HOH A 14 914 6 HOH HOH . 
K 5 HOH A 15 915 5 HOH HOH . 
K 5 HOH A 16 916 22 HOH HOH . 
K 5 HOH A 17 917 19 HOH HOH . 
K 5 HOH A 18 918 8 HOH HOH . 
K 5 HOH A 19 919 1 HOH HOH . 
K 5 HOH A 20 920 4 HOH HOH . 
K 5 HOH A 21 921 21 HOH HOH . 
K 5 HOH A 22 922 23 HOH HOH . 
K 5 HOH A 23 923 45 HOH HOH . 
K 5 HOH A 24 924 9 HOH HOH . 
K 5 HOH A 25 925 37 HOH HOH . 
K 5 HOH A 26 926 42 HOH HOH . 
K 5 HOH A 27 927 40 HOH HOH . 
K 5 HOH A 28 928 14 HOH HOH . 
K 5 HOH A 29 929 44 HOH HOH . 
K 5 HOH A 30 930 18 HOH HOH . 
K 5 HOH A 31 931 16 HOH HOH . 
K 5 HOH A 32 932 10 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . C 3 31.728 9.937 -37.988 1 112.79 ? PG ATP 802 A 1 
HETATM 2 O O1G ATP . . . C 3 30.658 8.928 -37.648 1 114 ? O1G ATP 802 A 1 
HETATM 3 O O2G ATP . . . C 3 31.367 11.373 -37.692 1 113.27 ? O2G ATP 802 A 1 
HETATM 4 O O3G ATP . . . C 3 32.389 9.745 -39.334 1 111.37 ? O3G ATP 802 A 1 
HETATM 5 P PB ATP . . . C 3 33.289 8.075 -36.586 1 96.67 ? PB ATP 802 A 1 
HETATM 6 O O1B ATP . . . C 3 32.866 7.159 -37.705 1 98.13 ? O1B ATP 802 A 1 
HETATM 7 O O2B ATP . . . C 3 32.8 7.788 -35.181 1 95.15 ? O2B ATP 802 A 1 
HETATM 8 O O3B ATP . . . C 3 32.889 9.597 -36.927 1 105.89 ? O3B ATP 802 A 1 
HETATM 9 P PA ATP . . . C 3 35.9 7.31 -37.48 1 82.51 ? PA ATP 802 A 1 
HETATM 10 O O1A ATP . . . C 3 36.716 8.225 -38.364 1 83.49 ? O1A ATP 802 A 1 
HETATM 11 O O2A ATP . . . C 3 35.237 6.097 -38.089 1 82.28 ? O2A ATP 802 A 1 
HETATM 12 O O3A ATP . . . C 3 34.898 8.179 -36.555 1 88.33 ? O3A ATP 802 A 1 
HETATM 13 O O5' ATP . . . C 3 36.897 6.752 -36.356 1 75 ? O5' ATP 802 A 1 
HETATM 14 C C5' ATP . . . C 3 37.439 7.605 -35.361 1 69.48 ? C5' ATP 802 A 1 
HETATM 15 C C4' ATP . . . C 3 38.798 7.015 -35.029 1 65.63 ? C4' ATP 802 A 1 
HETATM 16 O O4' ATP . . . C 3 38.704 5.632 -34.673 1 65.71 ? O4' ATP 802 A 1 
HETATM 17 C C3' ATP . . . C 3 39.66 7.078 -36.273 1 63.75 ? C3' ATP 802 A 1 
HETATM 18 O O3' ATP . . . C 3 40.915 7.596 -35.834 1 61.91 ? O3' ATP 802 A 1 
HETATM 19 C C2' ATP . . . C 3 39.843 5.647 -36.736 1 62.06 ? C2' ATP 802 A 1 
HETATM 20 O O2' ATP . . . C 3 41.171 5.418 -37.208 1 61.27 ? O2' ATP 802 A 1 
HETATM 21 C C1' ATP . . . C 3 39.598 4.849 -35.467 1 63.32 ? C1' ATP 802 A 1 
HETATM 22 N N9 ATP . . . C 3 39.083 3.469 -35.731 1 61.25 ? N9 ATP 802 A 1 
HETATM 23 C C8 ATP . . . C 3 38.001 3.151 -36.443 1 59.9 ? C8 ATP 802 A 1 
HETATM 24 N N7 ATP . . . C 3 37.846 1.797 -36.473 1 58.8 ? N7 ATP 802 A 1 
HETATM 25 C C5 ATP . . . C 3 38.841 1.236 -35.774 1 59.37 ? C5 ATP 802 A 1 
HETATM 26 C C6 ATP . . . C 3 39.303 -0.123 -35.39 1 57.43 ? C6 ATP 802 A 1 
HETATM 27 N N6 ATP . . . C 3 38.638 -1.236 -35.776 1 59.66 ? N6 ATP 802 A 1 
HETATM 28 N N1 ATP . . . C 3 40.424 -0.229 -34.631 1 54.22 ? N1 ATP 802 A 1 
HETATM 29 C C2 ATP . . . C 3 41.108 0.851 -34.23 1 53.01 ? C2 ATP 802 A 1 
HETATM 30 N N3 ATP . . . C 3 40.754 2.106 -34.537 1 54.92 ? N3 ATP 802 A 1 
HETATM 31 C C4 ATP . . . C 3 39.667 2.364 -35.284 1 59.26 ? C4 ATP 802 A 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           340 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           31 
#