data_6TOG # _model_server_result.job_id FyMk96JzIRSWBAvgk7cxtg _model_server_result.datetime_utc '2025-01-10 08:19:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tog # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 6TOG # _exptl.entry_id 6TOG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6TOG _cell.length_a 67.329 _cell.length_b 67.329 _cell.length_c 154.395 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TOG _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_554 -y,-x,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 -25.7325 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 6TOG _atom_sites.fract_transf_matrix[1][1] 0.014852 _atom_sites.fract_transf_matrix[1][2] 0.008575 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01715 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006477 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NQH A 1 201 200 NQH 848 . D 4 DMS A 1 202 1 DMS DMS . E 5 CL A 1 203 1 CL CL . F 6 HOH A 1 301 28 HOH HOH . F 6 HOH A 2 302 6 HOH HOH . F 6 HOH A 3 303 15 HOH HOH . F 6 HOH A 4 304 45 HOH HOH . F 6 HOH A 5 305 47 HOH HOH . F 6 HOH A 6 306 14 HOH HOH . F 6 HOH A 7 307 54 HOH HOH . F 6 HOH A 8 308 33 HOH HOH . F 6 HOH A 9 309 36 HOH HOH . F 6 HOH A 10 310 49 HOH HOH . F 6 HOH A 11 311 23 HOH HOH . F 6 HOH A 12 312 5 HOH HOH . F 6 HOH A 13 313 41 HOH HOH . F 6 HOH A 14 314 29 HOH HOH . F 6 HOH A 15 315 27 HOH HOH . F 6 HOH A 16 316 22 HOH HOH . F 6 HOH A 17 317 18 HOH HOH . F 6 HOH A 18 318 9 HOH HOH . F 6 HOH A 19 319 25 HOH HOH . F 6 HOH A 20 320 43 HOH HOH . F 6 HOH A 21 321 7 HOH HOH . F 6 HOH A 22 322 63 HOH HOH . F 6 HOH A 23 323 42 HOH HOH . F 6 HOH A 24 324 55 HOH HOH . F 6 HOH A 25 325 4 HOH HOH . F 6 HOH A 26 326 44 HOH HOH . F 6 HOH A 27 327 46 HOH HOH . F 6 HOH A 28 328 24 HOH HOH . F 6 HOH A 29 329 32 HOH HOH . F 6 HOH A 30 330 37 HOH HOH . F 6 HOH A 31 331 74 HOH HOH . F 6 HOH A 32 332 20 HOH HOH . F 6 HOH A 33 333 16 HOH HOH . F 6 HOH A 34 334 30 HOH HOH . F 6 HOH A 35 335 51 HOH HOH . F 6 HOH A 36 336 48 HOH HOH . F 6 HOH A 37 337 10 HOH HOH . F 6 HOH A 38 338 17 HOH HOH . F 6 HOH A 39 339 26 HOH HOH . F 6 HOH A 40 340 76 HOH HOH . F 6 HOH A 41 341 70 HOH HOH . F 6 HOH A 42 342 62 HOH HOH . F 6 HOH A 43 343 75 HOH HOH . F 6 HOH A 44 344 59 HOH HOH . F 6 HOH A 45 345 19 HOH HOH . F 6 HOH A 46 346 65 HOH HOH . F 6 HOH A 47 347 31 HOH HOH . F 6 HOH A 48 348 73 HOH HOH . F 6 HOH A 49 349 12 HOH HOH . F 6 HOH A 50 350 38 HOH HOH . F 6 HOH A 51 351 40 HOH HOH . F 6 HOH A 52 352 67 HOH HOH . F 6 HOH A 53 353 34 HOH HOH . F 6 HOH A 54 354 11 HOH HOH . F 6 HOH A 55 355 61 HOH HOH . F 6 HOH A 56 356 39 HOH HOH . F 6 HOH A 57 357 64 HOH HOH . F 6 HOH A 58 358 21 HOH HOH . F 6 HOH A 59 359 56 HOH HOH . F 6 HOH A 60 360 68 HOH HOH . F 6 HOH A 61 361 66 HOH HOH . F 6 HOH A 62 362 72 HOH HOH . F 6 HOH A 63 363 58 HOH HOH . F 6 HOH A 64 364 13 HOH HOH . F 6 HOH A 65 365 50 HOH HOH . F 6 HOH A 66 366 69 HOH HOH . F 6 HOH A 67 367 8 HOH HOH . F 6 HOH A 68 368 52 HOH HOH . G 6 HOH B 1 101 1 HOH HOH . G 6 HOH B 2 102 57 HOH HOH . G 6 HOH B 3 103 53 HOH HOH . G 6 HOH B 4 104 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 4 -39.721 9.975 -1.911 0.54 55.77 ? S DMS 202 A 1 HETATM 2 O O DMS . . . D 4 -39.72 9.601 -0.49 0.54 56.74 ? O DMS 202 A 1 HETATM 3 C C1 DMS . . . D 4 -39.031 11.603 -1.918 0.54 55.39 ? C1 DMS 202 A 1 HETATM 4 C C2 DMS . . . D 4 -38.391 9.038 -2.602 0.54 55.77 ? C2 DMS 202 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #