data_6TOI
#
_model_server_result.job_id            Jrp_ESra6z9swUqhpkw1zg 
_model_server_result.datetime_utc      '2024-11-14 03:47:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6toi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":207}' 
#
_entry.id    6TOI 
#
_exptl.entry_id    6TOI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6TOI 
_cell.length_a            67.66 
_cell.length_b            67.66 
_cell.length_c            166.64 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6TOI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_545 x,x-y-1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 33.83 -58.595279 27.773333 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 I N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     6TOI 
_atom_sites.fract_transf_matrix[1][1]    0.01478 
_atom_sites.fract_transf_matrix[1][2]    0.008533 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017066 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006001 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NQN A 1 201 200 NQN 357 . 
D 4 EDO A 1 202 1 EDO EDO . 
E 4 EDO A 1 203 3 EDO EDO . 
F 4 EDO A 1 204 4 EDO EDO . 
G 4 EDO A 1 205 5 EDO EDO . 
H 5 DMS A 1 206 1 DMS DMS . 
I 5 DMS A 1 207 2 DMS DMS . 
J 4 EDO B 1 101 2 EDO EDO . 
K 6 HOH A 1 301 156 HOH HOH . 
K 6 HOH A 2 302 79 HOH HOH . 
K 6 HOH A 3 303 13 HOH HOH . 
K 6 HOH A 4 304 22 HOH HOH . 
K 6 HOH A 5 305 142 HOH HOH . 
K 6 HOH A 6 306 146 HOH HOH . 
K 6 HOH A 7 307 6 HOH HOH . 
K 6 HOH A 8 308 122 HOH HOH . 
K 6 HOH A 9 309 144 HOH HOH . 
K 6 HOH A 10 310 160 HOH HOH . 
K 6 HOH A 11 311 40 HOH HOH . 
K 6 HOH A 12 312 151 HOH HOH . 
K 6 HOH A 13 313 30 HOH HOH . 
K 6 HOH A 14 314 165 HOH HOH . 
K 6 HOH A 15 315 27 HOH HOH . 
K 6 HOH A 16 316 58 HOH HOH . 
K 6 HOH A 17 317 166 HOH HOH . 
K 6 HOH A 18 318 89 HOH HOH . 
K 6 HOH A 19 319 96 HOH HOH . 
K 6 HOH A 20 320 143 HOH HOH . 
K 6 HOH A 21 321 102 HOH HOH . 
K 6 HOH A 22 322 83 HOH HOH . 
K 6 HOH A 23 323 138 HOH HOH . 
K 6 HOH A 24 324 21 HOH HOH . 
K 6 HOH A 25 325 25 HOH HOH . 
K 6 HOH A 26 326 152 HOH HOH . 
K 6 HOH A 27 327 95 HOH HOH . 
K 6 HOH A 28 328 55 HOH HOH . 
K 6 HOH A 29 329 50 HOH HOH . 
K 6 HOH A 30 330 15 HOH HOH . 
K 6 HOH A 31 331 33 HOH HOH . 
K 6 HOH A 32 332 16 HOH HOH . 
K 6 HOH A 33 333 168 HOH HOH . 
K 6 HOH A 34 334 191 HOH HOH . 
K 6 HOH A 35 335 12 HOH HOH . 
K 6 HOH A 36 336 148 HOH HOH . 
K 6 HOH A 37 337 119 HOH HOH . 
K 6 HOH A 38 338 1 HOH HOH . 
K 6 HOH A 39 339 149 HOH HOH . 
K 6 HOH A 40 340 23 HOH HOH . 
K 6 HOH A 41 341 92 HOH HOH . 
K 6 HOH A 42 342 3 HOH HOH . 
K 6 HOH A 43 343 24 HOH HOH . 
K 6 HOH A 44 344 5 HOH HOH . 
K 6 HOH A 45 345 2 HOH HOH . 
K 6 HOH A 46 346 67 HOH HOH . 
K 6 HOH A 47 347 38 HOH HOH . 
K 6 HOH A 48 348 94 HOH HOH . 
K 6 HOH A 49 349 93 HOH HOH . 
K 6 HOH A 50 350 14 HOH HOH . 
K 6 HOH A 51 351 129 HOH HOH . 
K 6 HOH A 52 352 73 HOH HOH . 
K 6 HOH A 53 353 141 HOH HOH . 
K 6 HOH A 54 354 52 HOH HOH . 
K 6 HOH A 55 355 4 HOH HOH . 
K 6 HOH A 56 356 91 HOH HOH . 
K 6 HOH A 57 357 37 HOH HOH . 
K 6 HOH A 58 358 64 HOH HOH . 
K 6 HOH A 59 359 188 HOH HOH . 
K 6 HOH A 60 360 20 HOH HOH . 
K 6 HOH A 61 361 9 HOH HOH . 
K 6 HOH A 62 362 11 HOH HOH . 
K 6 HOH A 63 363 70 HOH HOH . 
K 6 HOH A 64 364 90 HOH HOH . 
K 6 HOH A 65 365 56 HOH HOH . 
K 6 HOH A 66 366 42 HOH HOH . 
K 6 HOH A 67 367 192 HOH HOH . 
K 6 HOH A 68 368 153 HOH HOH . 
K 6 HOH A 69 369 147 HOH HOH . 
K 6 HOH A 70 370 34 HOH HOH . 
K 6 HOH A 71 371 28 HOH HOH . 
K 6 HOH A 72 372 161 HOH HOH . 
K 6 HOH A 73 373 74 HOH HOH . 
K 6 HOH A 74 374 162 HOH HOH . 
K 6 HOH A 75 375 35 HOH HOH . 
K 6 HOH A 76 376 195 HOH HOH . 
K 6 HOH A 77 377 7 HOH HOH . 
K 6 HOH A 78 378 65 HOH HOH . 
K 6 HOH A 79 379 145 HOH HOH . 
K 6 HOH A 80 380 97 HOH HOH . 
K 6 HOH A 81 381 61 HOH HOH . 
K 6 HOH A 82 382 32 HOH HOH . 
K 6 HOH A 83 383 36 HOH HOH . 
K 6 HOH A 84 384 19 HOH HOH . 
K 6 HOH A 85 385 48 HOH HOH . 
K 6 HOH A 86 386 154 HOH HOH . 
K 6 HOH A 87 387 72 HOH HOH . 
K 6 HOH A 88 388 134 HOH HOH . 
K 6 HOH A 89 389 41 HOH HOH . 
K 6 HOH A 90 390 197 HOH HOH . 
K 6 HOH A 91 391 8 HOH HOH . 
K 6 HOH A 92 392 17 HOH HOH . 
K 6 HOH A 93 393 169 HOH HOH . 
K 6 HOH A 94 394 51 HOH HOH . 
K 6 HOH A 95 395 45 HOH HOH . 
K 6 HOH A 96 396 77 HOH HOH . 
K 6 HOH A 97 397 71 HOH HOH . 
K 6 HOH A 98 398 201 HOH HOH . 
K 6 HOH A 99 399 200 HOH HOH . 
K 6 HOH A 100 400 18 HOH HOH . 
K 6 HOH A 101 401 63 HOH HOH . 
K 6 HOH A 102 402 26 HOH HOH . 
K 6 HOH A 103 403 86 HOH HOH . 
K 6 HOH A 104 404 46 HOH HOH . 
K 6 HOH A 105 405 106 HOH HOH . 
K 6 HOH A 106 406 31 HOH HOH . 
K 6 HOH A 107 407 180 HOH HOH . 
K 6 HOH A 108 408 49 HOH HOH . 
K 6 HOH A 109 409 183 HOH HOH . 
K 6 HOH A 110 410 10 HOH HOH . 
K 6 HOH A 111 411 100 HOH HOH . 
K 6 HOH A 112 412 190 HOH HOH . 
K 6 HOH A 113 413 47 HOH HOH . 
K 6 HOH A 114 414 163 HOH HOH . 
K 6 HOH A 115 415 126 HOH HOH . 
K 6 HOH A 116 416 39 HOH HOH . 
K 6 HOH A 117 417 120 HOH HOH . 
K 6 HOH A 118 418 60 HOH HOH . 
K 6 HOH A 119 419 85 HOH HOH . 
K 6 HOH A 120 420 178 HOH HOH . 
K 6 HOH A 121 421 182 HOH HOH . 
K 6 HOH A 122 422 198 HOH HOH . 
K 6 HOH A 123 423 98 HOH HOH . 
K 6 HOH A 124 424 196 HOH HOH . 
K 6 HOH A 125 425 171 HOH HOH . 
K 6 HOH A 126 426 181 HOH HOH . 
K 6 HOH A 127 427 170 HOH HOH . 
K 6 HOH A 128 428 99 HOH HOH . 
K 6 HOH A 129 429 111 HOH HOH . 
K 6 HOH A 130 430 174 HOH HOH . 
K 6 HOH A 131 431 59 HOH HOH . 
K 6 HOH A 132 432 193 HOH HOH . 
K 6 HOH A 133 433 157 HOH HOH . 
K 6 HOH A 134 434 76 HOH HOH . 
K 6 HOH A 135 435 179 HOH HOH . 
K 6 HOH A 136 436 82 HOH HOH . 
K 6 HOH A 137 437 68 HOH HOH . 
K 6 HOH A 138 438 66 HOH HOH . 
K 6 HOH A 139 439 155 HOH HOH . 
K 6 HOH A 140 440 184 HOH HOH . 
K 6 HOH A 141 441 189 HOH HOH . 
K 6 HOH A 142 442 199 HOH HOH . 
K 6 HOH A 143 443 185 HOH HOH . 
K 6 HOH A 144 444 187 HOH HOH . 
K 6 HOH A 145 445 186 HOH HOH . 
K 6 HOH A 146 446 176 HOH HOH . 
K 6 HOH A 147 447 172 HOH HOH . 
K 6 HOH A 148 448 177 HOH HOH . 
L 6 HOH B 1 201 103 HOH HOH . 
L 6 HOH B 2 202 44 HOH HOH . 
L 6 HOH B 3 203 175 HOH HOH . 
L 6 HOH B 4 204 54 HOH HOH . 
L 6 HOH B 5 205 80 HOH HOH . 
L 6 HOH B 6 206 69 HOH HOH . 
L 6 HOH B 7 207 173 HOH HOH . 
L 6 HOH B 8 208 159 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . I 5 34.466 -18.607 36.477 0.59 59.72 ? S DMS 207 A 1 
HETATM 2 O O DMS . . . I 5 33.751 -19.871 36.718 0.59 58.78 ? O DMS 207 A 1 
HETATM 3 C C1 DMS . . . I 5 34.625 -17.893 38.092 0.59 59.81 ? C1 DMS 207 A 1 
HETATM 4 C C2 DMS . . . I 5 36.153 -19.083 36.229 0.59 60.04 ? C2 DMS 207 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           285 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#