data_6TPA # _model_server_result.job_id IEhkfe5duSD1Ns-zxYe_Mg _model_server_result.datetime_utc '2024-10-19 01:39:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tpa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6TPA # _exptl.entry_id 6TPA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 525.867 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[4-chloranyl-3-(trifluoromethyl)phenyl]-3-(5-oxidanylidene-6-pyridin-4-yl-pyrido[2,3-b][1,5]benzoxazepin-9-yl)urea _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TPA _cell.length_a 71.985 _cell.length_b 72.339 _cell.length_c 189.127 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TPA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H15 Cl F3 N5 O3' _chem_comp.formula_weight 525.867 _chem_comp.id NZ8 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[4-chloranyl-3-(trifluoromethyl)phenyl]-3-(5-oxidanylidene-6-pyridin-4-yl-pyrido[2,3-b][1,5]benzoxazepin-9-yl)urea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CLK CBJ NZ8 sing 256 n n FAC CAB NZ8 sing 257 n n CBJ CBI NZ8 doub 258 n y CBJ CAE NZ8 sing 259 n y CBI CBH NZ8 sing 260 n y CAB CAE NZ8 sing 261 n n CAB FAD NZ8 sing 262 n n CAB FAA NZ8 sing 263 n n CAE CAF NZ8 doub 264 n y CBH CAG NZ8 doub 265 n y CAF CAG NZ8 sing 266 n y CAG NAH NZ8 sing 267 n n NAH CAI NZ8 sing 268 n n CAI OAJ NZ8 doub 269 n n CAI NAK NZ8 sing 270 n n NAK CAL NZ8 sing 271 n n CAL CAM NZ8 doub 272 n y CAL CBA NZ8 sing 273 n y CAM CAN NZ8 sing 274 n y CBA CAZ NZ8 doub 275 n y CAN CAO NZ8 doub 276 n y CAZ CAO NZ8 sing 277 n y CAZ OAY NZ8 sing 278 n n CAO NAP NZ8 sing 279 n n OAY CAX NZ8 sing 280 n n CBC CBD NZ8 doub 281 n y CBC CBB NZ8 sing 282 n y NAW CAX NZ8 doub 283 n y NAW CAV NZ8 sing 284 n y CAX CAS NZ8 sing 285 n y CBD NBE NZ8 sing 286 n y NAP CBB NZ8 sing 287 n n NAP CAQ NZ8 sing 288 n n CAV CAU NZ8 doub 289 n y CBB CBG NZ8 doub 290 n y CAS CAQ NZ8 sing 291 n n CAS CAT NZ8 doub 292 n y NBE CBF NZ8 doub 293 n y CAQ OAR NZ8 doub 294 n n CAU CAT NZ8 sing 295 n y CBG CBF NZ8 sing 296 n y CAF H1 NZ8 sing 297 n n CAM H2 NZ8 sing 298 n n CAN H3 NZ8 sing 299 n n CAT H4 NZ8 sing 300 n n CAU H5 NZ8 sing 301 n n CAV H6 NZ8 sing 302 n n CBA H7 NZ8 sing 303 n n CBC H8 NZ8 sing 304 n n CBD H9 NZ8 sing 305 n n CBF H10 NZ8 sing 306 n n CBG H11 NZ8 sing 307 n n CBH H12 NZ8 sing 308 n n CBI H13 NZ8 sing 309 n n NAH H14 NZ8 sing 310 n n NAK H15 NZ8 sing 311 n n # _atom_sites.entry_id 6TPA _atom_sites.fract_transf_matrix[1][1] 0.013892 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013824 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005287 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NZ8 A 1 501 401 NZ8 DRG . D 4 FMT A 1 502 1 FMT FMT . E 4 FMT A 1 503 10 FMT FMT . F 4 FMT A 1 504 12 FMT FMT . G 5 NZ5 A 1 505 2 NZ5 BUT . H 5 NZ5 A 1 506 3 NZ5 BUT . I 5 NZ5 A 1 507 4 NZ5 BUT . J 4 FMT B 1 301 3 FMT FMT . K 4 FMT B 1 302 4 FMT FMT . L 4 FMT B 1 303 5 FMT FMT . M 4 FMT B 1 304 6 FMT FMT . N 4 FMT B 1 305 7 FMT FMT . O 4 FMT B 1 306 8 FMT FMT . P 4 FMT B 1 307 9 FMT FMT . Q 4 FMT B 1 308 13 FMT FMT . R 4 FMT B 1 309 14 FMT FMT . S 5 NZ5 B 1 310 1 NZ5 BUT . T 6 HOH A 1 601 116 HOH HOH . T 6 HOH A 2 602 131 HOH HOH . T 6 HOH A 3 603 6 HOH HOH . T 6 HOH A 4 604 4 HOH HOH . T 6 HOH A 5 605 10 HOH HOH . T 6 HOH A 6 606 142 HOH HOH . T 6 HOH A 7 607 126 HOH HOH . T 6 HOH A 8 608 9 HOH HOH . T 6 HOH A 9 609 129 HOH HOH . T 6 HOH A 10 610 3 HOH HOH . T 6 HOH A 11 611 106 HOH HOH . T 6 HOH A 12 612 37 HOH HOH . T 6 HOH A 13 613 67 HOH HOH . T 6 HOH A 14 614 46 HOH HOH . T 6 HOH A 15 615 1 HOH HOH . T 6 HOH A 16 616 42 HOH HOH . T 6 HOH A 17 617 7 HOH HOH . T 6 HOH A 18 618 128 HOH HOH . T 6 HOH A 19 619 52 HOH HOH . T 6 HOH A 20 620 138 HOH HOH . T 6 HOH A 21 621 165 HOH HOH . T 6 HOH A 22 622 21 HOH HOH . T 6 HOH A 23 623 33 HOH HOH . T 6 HOH A 24 624 22 HOH HOH . T 6 HOH A 25 625 5 HOH HOH . T 6 HOH A 26 626 35 HOH HOH . T 6 HOH A 27 627 55 HOH HOH . T 6 HOH A 28 628 28 HOH HOH . T 6 HOH A 29 629 186 HOH HOH . T 6 HOH A 30 630 8 HOH HOH . T 6 HOH A 31 631 15 HOH HOH . T 6 HOH A 32 632 210 HOH HOH . T 6 HOH A 33 633 45 HOH HOH . T 6 HOH A 34 634 43 HOH HOH . T 6 HOH A 35 635 187 HOH HOH . T 6 HOH A 36 636 65 HOH HOH . T 6 HOH A 37 637 115 HOH HOH . T 6 HOH A 38 638 69 HOH HOH . T 6 HOH A 39 639 214 HOH HOH . T 6 HOH A 40 640 24 HOH HOH . T 6 HOH A 41 641 63 HOH HOH . T 6 HOH A 42 642 54 HOH HOH . T 6 HOH A 43 643 25 HOH HOH . T 6 HOH A 44 644 61 HOH HOH . T 6 HOH A 45 645 125 HOH HOH . T 6 HOH A 46 646 133 HOH HOH . T 6 HOH A 47 647 59 HOH HOH . T 6 HOH A 48 648 49 HOH HOH . T 6 HOH A 49 649 185 HOH HOH . T 6 HOH A 50 650 207 HOH HOH . T 6 HOH A 51 651 51 HOH HOH . T 6 HOH A 52 652 60 HOH HOH . T 6 HOH A 53 653 47 HOH HOH . T 6 HOH A 54 654 163 HOH HOH . T 6 HOH A 55 655 122 HOH HOH . T 6 HOH A 56 656 183 HOH HOH . U 6 HOH B 1 401 159 HOH HOH . U 6 HOH B 2 402 112 HOH HOH . U 6 HOH B 3 403 151 HOH HOH . U 6 HOH B 4 404 71 HOH HOH . U 6 HOH B 5 405 209 HOH HOH . U 6 HOH B 6 406 120 HOH HOH . U 6 HOH B 7 407 89 HOH HOH . U 6 HOH B 8 408 82 HOH HOH . U 6 HOH B 9 409 76 HOH HOH . U 6 HOH B 10 410 157 HOH HOH . U 6 HOH B 11 411 99 HOH HOH . U 6 HOH B 12 412 139 HOH HOH . U 6 HOH B 13 413 80 HOH HOH . U 6 HOH B 14 414 72 HOH HOH . U 6 HOH B 15 415 86 HOH HOH . U 6 HOH B 16 416 87 HOH HOH . U 6 HOH B 17 417 91 HOH HOH . U 6 HOH B 18 418 98 HOH HOH . U 6 HOH B 19 419 75 HOH HOH . U 6 HOH B 20 420 177 HOH HOH . U 6 HOH B 21 421 211 HOH HOH . U 6 HOH B 22 422 20 HOH HOH . U 6 HOH B 23 423 100 HOH HOH . U 6 HOH B 24 424 90 HOH HOH . U 6 HOH B 25 425 84 HOH HOH . U 6 HOH B 26 426 154 HOH HOH . U 6 HOH B 27 427 213 HOH HOH . U 6 HOH B 28 428 92 HOH HOH . U 6 HOH B 29 429 212 HOH HOH . U 6 HOH B 30 430 94 HOH HOH . U 6 HOH B 31 431 195 HOH HOH . U 6 HOH B 32 432 206 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAB NZ8 . . . C 3 1.693 12.003 -25.515 1 47.76 ? CAB NZ8 501 A 1 HETATM 2 C CAE NZ8 . . . C 3 2.301 10.604 -25.396 1 48.06 ? CAE NZ8 501 A 1 HETATM 3 C CAF NZ8 . . . C 3 3.171 10.238 -24.39 1 47.45 ? CAF NZ8 501 A 1 HETATM 4 C CAG NZ8 . . . C 3 3.663 8.947 -24.375 1 44.53 ? CAG NZ8 501 A 1 HETATM 5 C CAI NZ8 . . . C 3 4.634 9.092 -22.066 1 44.51 ? CAI NZ8 501 A 1 HETATM 6 C CAL NZ8 . . . C 3 5.811 8.874 -19.834 1 43.72 ? CAL NZ8 501 A 1 HETATM 7 C CAM NZ8 . . . C 3 5.415 10.133 -19.384 1 41.98 ? CAM NZ8 501 A 1 HETATM 8 C CAN NZ8 . . . C 3 5.559 10.476 -18.056 1 43.5 ? CAN NZ8 501 A 1 HETATM 9 C CAO NZ8 . . . C 3 6.128 9.533 -17.158 1 44.42 ? CAO NZ8 501 A 1 HETATM 10 C CAQ NZ8 . . . C 3 5.929 8.974 -14.657 1 43.88 ? CAQ NZ8 501 A 1 HETATM 11 C CAS NZ8 . . . C 3 5.456 7.538 -14.934 1 48.16 ? CAS NZ8 501 A 1 HETATM 12 C CAT NZ8 . . . C 3 4.453 6.975 -14.119 1 49 ? CAT NZ8 501 A 1 HETATM 13 C CAU NZ8 . . . C 3 4.089 5.656 -14.393 1 54.26 ? CAU NZ8 501 A 1 HETATM 14 C CAV NZ8 . . . C 3 4.694 4.943 -15.429 1 54.43 ? CAV NZ8 501 A 1 HETATM 15 C CAX NZ8 . . . C 3 6.035 6.78 -15.922 1 48.61 ? CAX NZ8 501 A 1 HETATM 16 C CAZ NZ8 . . . C 3 6.496 8.289 -17.62 1 42.69 ? CAZ NZ8 501 A 1 HETATM 17 C CBA NZ8 . . . C 3 6.336 7.927 -18.976 1 43.39 ? CBA NZ8 501 A 1 HETATM 18 C CBB NZ8 . . . C 3 6.729 11.228 -15.372 1 47.95 ? CBB NZ8 501 A 1 HETATM 19 C CBC NZ8 . . . C 3 7.646 11.924 -16.164 1 47.62 ? CBC NZ8 501 A 1 HETATM 20 C CBD NZ8 . . . C 3 8.019 13.214 -15.803 1 47.69 ? CBD NZ8 501 A 1 HETATM 21 C CBF NZ8 . . . C 3 6.67 13.201 -13.964 1 45.05 ? CBF NZ8 501 A 1 HETATM 22 C CBG NZ8 . . . C 3 6.257 11.914 -14.26 1 42.87 ? CBG NZ8 501 A 1 HETATM 23 C CBH NZ8 . . . C 3 3.313 7.998 -25.329 1 43.64 ? CBH NZ8 501 A 1 HETATM 24 C CBI NZ8 . . . C 3 2.463 8.385 -26.343 1 47.9 ? CBI NZ8 501 A 1 HETATM 25 C CBJ NZ8 . . . C 3 1.968 9.678 -26.35 1 44.08 ? CBJ NZ8 501 A 1 HETATM 26 F FAA NZ8 . . . C 3 2.245 12.912 -24.626 1 42.92 ? FAA NZ8 501 A 1 HETATM 27 F FAC NZ8 . . . C 3 1.858 12.378 -26.817 1 41.69 ? FAC NZ8 501 A 1 HETATM 28 F FAD NZ8 . . . C 3 0.353 11.918 -25.292 1 45.49 ? FAD NZ8 501 A 1 HETATM 29 N NAH NZ8 . . . C 3 4.562 8.511 -23.36 1 43.22 ? NAH NZ8 501 A 1 HETATM 30 N NAK NZ8 . . . C 3 5.616 8.461 -21.199 1 46.71 ? NAK NZ8 501 A 1 HETATM 31 N NAP NZ8 . . . C 3 6.276 9.874 -15.725 1 44.04 ? NAP NZ8 501 A 1 HETATM 32 N NAW NZ8 . . . C 3 5.637 5.504 -16.156 1 52.21 ? NAW NZ8 501 A 1 HETATM 33 N NBE NZ8 . . . C 3 7.53 13.815 -14.735 1 45.23 ? NBE NZ8 501 A 1 HETATM 34 O OAJ NZ8 . . . C 3 3.949 10.01 -21.771 1 43.82 ? OAJ NZ8 501 A 1 HETATM 35 O OAR NZ8 . . . C 3 6.058 9.274 -13.534 1 49.06 ? OAR NZ8 501 A 1 HETATM 36 O OAY NZ8 . . . C 3 7.047 7.326 -16.756 1 44.95 ? OAY NZ8 501 A 1 HETATM 37 CL CLK NZ8 . . . C 3 0.85 10.212 -27.597 1 58.28 ? CLK NZ8 501 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 37 #