data_6TPN # _model_server_result.job_id 9FqONgBJnmQjdRSjNvbkVw _model_server_result.datetime_utc '2024-11-22 19:10:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tpn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1205}' # _entry.id 6TPN # _exptl.entry_id 6TPN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TPN _cell.length_a 90.945 _cell.length_b 173.95 _cell.length_c 78.327 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TPN _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 138 A CYS 127 1_555 A SG CYS 221 A CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? covale ? covale1 A C ASP 268 A ASP 1003 1_555 A N YCM 269 A YCM 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 ? covale ? covale2 A C YCM 269 A YCM 1004 1_555 A N SER 270 A SER 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 344 n n O1 HO1 PG4 sing 345 n n C1 C2 PG4 sing 346 n n C1 H11 PG4 sing 347 n n C1 H12 PG4 sing 348 n n C2 O2 PG4 sing 349 n n C2 H21 PG4 sing 350 n n C2 H22 PG4 sing 351 n n O2 C3 PG4 sing 352 n n C3 C4 PG4 sing 353 n n C3 H31 PG4 sing 354 n n C3 H32 PG4 sing 355 n n C4 O3 PG4 sing 356 n n C4 H41 PG4 sing 357 n n C4 H42 PG4 sing 358 n n O3 C5 PG4 sing 359 n n C5 C6 PG4 sing 360 n n C5 H51 PG4 sing 361 n n C5 H52 PG4 sing 362 n n C6 O4 PG4 sing 363 n n C6 H61 PG4 sing 364 n n C6 H62 PG4 sing 365 n n O4 C7 PG4 sing 366 n n C7 C8 PG4 sing 367 n n C7 H71 PG4 sing 368 n n C7 H72 PG4 sing 369 n n C8 O5 PG4 sing 370 n n C8 H81 PG4 sing 371 n n C8 H82 PG4 sing 372 n n O5 HO5 PG4 sing 373 n n # _atom_sites.entry_id 6TPN _atom_sites.fract_transf_matrix[1][1] 0.010996 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005749 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012767 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NU8 A 1 1201 900 NU8 LIG . C 3 NO3 A 1 1202 1 NO3 NO3 . D 3 NO3 A 1 1203 2 NO3 NO3 . E 4 PG4 A 1 1204 1 PG4 PG4 . F 4 PG4 A 1 1205 2 PG4 PG4 . G 5 OLA A 1 1206 2 OLA OLA . H 5 OLA A 1 1207 3 OLA OLA . I 5 OLA A 1 1208 4 OLA OLA . J 5 OLA A 1 1209 5 OLA OLA . K 6 HOH A 1 1301 67 HOH HOH . K 6 HOH A 2 1302 59 HOH HOH . K 6 HOH A 3 1303 70 HOH HOH . K 6 HOH A 4 1304 73 HOH HOH . K 6 HOH A 5 1305 44 HOH HOH . K 6 HOH A 6 1306 53 HOH HOH . K 6 HOH A 7 1307 14 HOH HOH . K 6 HOH A 8 1308 27 HOH HOH . K 6 HOH A 9 1309 39 HOH HOH . K 6 HOH A 10 1310 52 HOH HOH . K 6 HOH A 11 1311 18 HOH HOH . K 6 HOH A 12 1312 1 HOH HOH . K 6 HOH A 13 1313 31 HOH HOH . K 6 HOH A 14 1314 10 HOH HOH . K 6 HOH A 15 1315 50 HOH HOH . K 6 HOH A 16 1316 16 HOH HOH . K 6 HOH A 17 1317 54 HOH HOH . K 6 HOH A 18 1318 47 HOH HOH . K 6 HOH A 19 1319 71 HOH HOH . K 6 HOH A 20 1320 21 HOH HOH . K 6 HOH A 21 1321 32 HOH HOH . K 6 HOH A 22 1322 12 HOH HOH . K 6 HOH A 23 1323 23 HOH HOH . K 6 HOH A 24 1324 26 HOH HOH . K 6 HOH A 25 1325 48 HOH HOH . K 6 HOH A 26 1326 42 HOH HOH . K 6 HOH A 27 1327 68 HOH HOH . K 6 HOH A 28 1328 60 HOH HOH . K 6 HOH A 29 1329 24 HOH HOH . K 6 HOH A 30 1330 61 HOH HOH . K 6 HOH A 31 1331 8 HOH HOH . K 6 HOH A 32 1332 69 HOH HOH . K 6 HOH A 33 1333 3 HOH HOH . K 6 HOH A 34 1334 29 HOH HOH . K 6 HOH A 35 1335 58 HOH HOH . K 6 HOH A 36 1336 49 HOH HOH . K 6 HOH A 37 1337 45 HOH HOH . K 6 HOH A 38 1338 13 HOH HOH . K 6 HOH A 39 1339 41 HOH HOH . K 6 HOH A 40 1340 57 HOH HOH . K 6 HOH A 41 1341 51 HOH HOH . K 6 HOH A 42 1342 43 HOH HOH . K 6 HOH A 43 1343 55 HOH HOH . K 6 HOH A 44 1344 7 HOH HOH . K 6 HOH A 45 1345 72 HOH HOH . K 6 HOH A 46 1346 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . F 4 121.938 181.56 2.659 1 53.42 ? O1 PG4 1205 A 1 HETATM 2 C C1 PG4 . . . F 4 121.119 180.757 3.516 1 55.19 ? C1 PG4 1205 A 1 HETATM 3 C C2 PG4 . . . F 4 119.799 180.42 2.828 1 59.21 ? C2 PG4 1205 A 1 HETATM 4 O O2 PG4 . . . F 4 118.968 181.577 2.753 1 63.32 ? O2 PG4 1205 A 1 HETATM 5 C C3 PG4 . . . F 4 117.586 181.222 2.71 1 64.12 ? C3 PG4 1205 A 1 HETATM 6 C C4 PG4 . . . F 4 116.734 182.463 2.944 1 64.39 ? C4 PG4 1205 A 1 HETATM 7 O O3 PG4 . . . F 4 116.938 183.376 1.87 1 65.91 ? O3 PG4 1205 A 1 HETATM 8 C C5 PG4 . . . F 4 116.134 184.546 2.005 1 66.41 ? C5 PG4 1205 A 1 HETATM 9 C C6 PG4 . . . F 4 116.218 185.349 0.713 1 67.47 ? C6 PG4 1205 A 1 HETATM 10 O O4 PG4 . . . F 4 117.573 185.741 0.502 1 69.92 ? O4 PG4 1205 A 1 HETATM 11 C C7 PG4 . . . F 4 117.871 185.911 -0.882 1 71.01 ? C7 PG4 1205 A 1 HETATM 12 C C8 PG4 . . . F 4 119.383 185.989 -1.05 1 70.46 ? C8 PG4 1205 A 1 HETATM 13 O O5 PG4 . . . F 4 119.976 184.791 -0.536 1 70.12 ? O5 PG4 1205 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #