data_6TPR # _model_server_result.job_id oa_7YqsZ6Qkhc9LN2VczyA _model_server_result.datetime_utc '2024-12-27 00:43:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tpr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6TPR # _exptl.entry_id 6TPR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 442.493 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[(5-methyl-[1,2,4]triazino[5,6-b]indol-3-yl)sulfanyl]-~{N}-(4-pyridin-2-yloxyphenyl)ethanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6TPR _cell.length_a 118.754 _cell.length_b 118.754 _cell.length_c 115.242 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TPR _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 9_765 -x+2,-x+y+1,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 178.131 102.843981 38.414 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H18 N6 O2 S' _chem_comp.formula_weight 442.493 _chem_comp.id NV5 _chem_comp.mon_nstd_flag . _chem_comp.name 2-[(5-methyl-[1,2,4]triazino[5,6-b]indol-3-yl)sulfanyl]-~{N}-(4-pyridin-2-yloxyphenyl)ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N3 N2 NV5 doub 237 n y N3 C9 NV5 sing 238 n y C10 S1 NV5 sing 239 n n C10 C11 NV5 sing 240 n n S1 C9 NV5 sing 241 n n N2 C8 NV5 sing 242 n y C18 C17 NV5 doub 243 n y C18 C19 NV5 sing 244 n y C9 N6 NV5 doub 245 n y C21 C22 NV5 doub 246 n y C21 C15 NV5 sing 247 n y C17 C16 NV5 sing 248 n y C22 C12 NV5 sing 249 n y C19 C20 NV5 doub 250 n y C8 C7 NV5 sing 251 n y C8 C23 NV5 doub 252 n y C11 O1 NV5 doub 253 n n C11 N4 NV5 sing 254 n n C6 C7 NV5 doub 255 n y C6 C5 NV5 sing 256 n y C16 O2 NV5 sing 257 n n C16 N5 NV5 doub 258 n y N6 C23 NV5 sing 259 n y C20 N5 NV5 sing 260 n y C7 C2 NV5 sing 261 n y O2 C15 NV5 sing 262 n n C15 C14 NV5 doub 263 n y C23 N1 NV5 sing 264 n y C12 N4 NV5 sing 265 n n C12 C13 NV5 doub 266 n y C5 C4 NV5 doub 267 n y C2 N1 NV5 sing 268 n y C2 C3 NV5 doub 269 n y N1 C1 NV5 sing 270 n n C14 C13 NV5 sing 271 n y C4 C3 NV5 sing 272 n y C4 H1 NV5 sing 273 n n C5 H2 NV5 sing 274 n n C6 H3 NV5 sing 275 n n C10 H4 NV5 sing 276 n n C10 H5 NV5 sing 277 n n C13 H6 NV5 sing 278 n n C17 H7 NV5 sing 279 n n C20 H8 NV5 sing 280 n n C21 H9 NV5 sing 281 n n C22 H10 NV5 sing 282 n n C1 H11 NV5 sing 283 n n C1 H12 NV5 sing 284 n n C1 H13 NV5 sing 285 n n C3 H14 NV5 sing 286 n n C19 H15 NV5 sing 287 n n C14 H16 NV5 sing 288 n n N4 H17 NV5 sing 289 n n C18 H18 NV5 sing 290 n n # _atom_sites.entry_id 6TPR _atom_sites.fract_transf_matrix[1][1] 0.008421 _atom_sites.fract_transf_matrix[1][2] 0.004862 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009723 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008677 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NV5 A 1 401 301 NV5 LUI . C 3 HOH A 1 501 2 HOH HOH . C 3 HOH A 2 502 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 NV5 . . . B 2 91.179 40.53 9.81 1 115.28 ? C4 NV5 401 A 1 HETATM 2 C C5 NV5 . . . B 2 90.307 40.235 8.759 1 112.67 ? C5 NV5 401 A 1 HETATM 3 C C6 NV5 . . . B 2 89.746 41.239 8.004 1 110.22 ? C6 NV5 401 A 1 HETATM 4 C C7 NV5 . . . B 2 90.066 42.56 8.309 1 112.41 ? C7 NV5 401 A 1 HETATM 5 C C10 NV5 . . . B 2 90.713 48.669 6.571 1 149.19 ? C10 NV5 401 A 1 HETATM 6 C C13 NV5 . . . B 2 93.942 47.788 9.582 1 141.33 ? C13 NV5 401 A 1 HETATM 7 C C15 NV5 . . . B 2 96.017 47.906 8.404 1 128.54 ? C15 NV5 401 A 1 HETATM 8 C C17 NV5 . . . B 2 99.473 47.96 7.396 1 133.78 ? C17 NV5 401 A 1 HETATM 9 C C20 NV5 . . . B 2 99.354 50.526 8.29 1 143.17 ? C20 NV5 401 A 1 HETATM 10 C C21 NV5 . . . B 2 95.396 48.543 7.35 1 136.08 ? C21 NV5 401 A 1 HETATM 11 C C22 NV5 . . . B 2 94.038 48.813 7.419 1 133.17 ? C22 NV5 401 A 1 HETATM 12 C C1 NV5 . . . B 2 91.929 44.896 10.446 1 104.66 ? C1 NV5 401 A 1 HETATM 13 C C3 NV5 . . . B 2 91.511 41.828 10.131 1 116.48 ? C3 NV5 401 A 1 HETATM 14 C C9 NV5 . . . B 2 89.366 46.364 7.186 1 152.7 ? C9 NV5 401 A 1 HETATM 15 C C19 NV5 . . . B 2 100.472 50.123 7.586 1 141.39 ? C19 NV5 401 A 1 HETATM 16 C C2 NV5 . . . B 2 90.945 42.845 9.369 1 111.42 ? C2 NV5 401 A 1 HETATM 17 C C11 NV5 . . . B 2 91.098 49.362 7.851 1 135.01 ? C11 NV5 401 A 1 HETATM 18 C C16 NV5 . . . B 2 98.4 48.474 8.104 1 139.67 ? C16 NV5 401 A 1 HETATM 19 C C14 NV5 . . . B 2 95.298 47.52 9.514 1 133.42 ? C14 NV5 401 A 1 HETATM 20 C C12 NV5 . . . B 2 93.298 48.437 8.536 1 140.54 ? C12 NV5 401 A 1 HETATM 21 N N1 NV5 . . . B 2 91.098 44.216 9.466 1 111.45 ? N1 NV5 401 A 1 HETATM 22 C C8 NV5 . . . B 2 89.691 43.839 7.761 1 117.66 ? C8 NV5 401 A 1 HETATM 23 N N2 NV5 . . . B 2 88.894 44.166 6.749 1 136.53 ? N2 NV5 401 A 1 HETATM 24 N N3 NV5 . . . B 2 88.745 45.417 6.469 1 158.47 ? N3 NV5 401 A 1 HETATM 25 S S1 NV5 . . . B 2 89.048 48.009 6.678 1 182.02 ? S1 NV5 401 A 1 HETATM 26 O O1 NV5 . . . B 2 90.689 50.477 8.114 1 146.51 ? O1 NV5 401 A 1 HETATM 27 N N4 NV5 . . . B 2 91.905 48.655 8.66 1 138.74 ? N4 NV5 401 A 1 HETATM 28 O O2 NV5 . . . B 2 97.383 47.596 8.361 1 125.55 ? O2 NV5 401 A 1 HETATM 29 C C18 NV5 . . . B 2 100.523 48.815 7.136 1 131.63 ? C18 NV5 401 A 1 HETATM 30 N N5 NV5 . . . B 2 98.315 49.704 8.556 1 145.27 ? N5 NV5 401 A 1 HETATM 31 N N6 NV5 . . . B 2 90.178 46.13 8.21 1 133.9 ? N6 NV5 401 A 1 HETATM 32 C C23 NV5 . . . B 2 90.338 44.826 8.491 1 121.13 ? C23 NV5 401 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 398 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 32 #