data_6TR1
#
_model_server_result.job_id            RFnn7xhobEwBz-E6PA-pUw 
_model_server_result.datetime_utc      '2024-10-19 19:45:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6tr1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":104}' 
#
_entry.id    6TR1 
#
_exptl.entry_id    6TR1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6TR1 
_cell.length_a            94.8 
_cell.length_b            94.8 
_cell.length_c            160.22 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6TR1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,L 1 1 
B,F,G,H,I,J,M 2 1 
C,K,N 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 G N N 
? 5 H N N 
? 5 I N N 
? 5 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 14 A CYS 14 1_555 D CAB HEC . A HEC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? 
covale ? covale2 A SG CYS 17 A CYS 17 1_555 D CAC HEC . A HEC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
covale ? covale3 B SG CYS 14 C CYS 14 1_555 F CAB HEC . C HEC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? 
covale ? covale4 B C GLN 71 C GLN 71 1_555 B N MEN 72 C MEN 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale5 B C MEN 72 C MEN 72 1_555 B N VAL 73 C VAL 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? 
covale ? covale6 C SG CYS 14 E CYS 14 1_555 K CAB HEC . E HEC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.879 ? 
covale ? covale7 C SG CYS 17 E CYS 17 1_555 K CAC HEC . E HEC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? 
metalc ? metalc1 A O ALA 4 A ALA 4 1_555 H NA NA . C NA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? 
metalc ? metalc2 A NE2 HIS 18 A HIS 18 1_555 D FE HEC . A HEC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
metalc ? metalc3 A OE1 GLU 44 A GLU 44 1_555 E NA NA . A NA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? 
metalc ? metalc4 A SD MET 58 A MET 58 1_555 D FE HEC . A HEC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc5 E NA NA . A NA 102 1_555 L O HOH . A HOH 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.899 ? 
metalc ? metalc6 B OD1 ASN 13 C ASN 13 1_555 G NA NA . C NA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? 
metalc ? metalc7 B NE2 HIS 18 C HIS 18 1_555 F FE HEC . C HEC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? 
metalc ? metalc8 B OE2 GLU 37 C GLU 37 1_555 H NA NA . C NA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? 
metalc ? metalc9 B SD MET 58 C MET 58 1_555 F FE HEC . C HEC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc10 G NA NA . C NA 102 1_555 M O HOH . C HOH 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.031 ? 
metalc ? metalc11 C NE2 HIS 18 E HIS 18 1_555 K FE HEC . E HEC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
metalc ? metalc12 C SD MET 58 E MET 58 1_555 K FE HEC . E HEC 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6TR1 
_atom_sites.fract_transf_matrix[1][1]    0.010549 
_atom_sites.fract_transf_matrix[1][2]    0.00609 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01218 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006241 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 HEC A 1 101 93 HEC HEM . 
E 5 NA A 1 102 2 NA NA . 
F 4 HEC C 1 101 93 HEC HEM . 
G 5 NA C 1 102 1 NA NA . 
H 5 NA C 1 103 3 NA NA . 
I 5 NA C 1 104 5 NA NA . 
J 5 NA C 1 105 6 NA NA . 
K 4 HEC E 1 101 93 HEC HEM . 
L 6 HOH A 1 201 75 HOH HOH . 
L 6 HOH A 2 202 37 HOH HOH . 
L 6 HOH A 3 203 58 HOH HOH . 
L 6 HOH A 4 204 19 HOH HOH . 
L 6 HOH A 5 205 36 HOH HOH . 
L 6 HOH A 6 206 9 HOH HOH . 
L 6 HOH A 7 207 27 HOH HOH . 
L 6 HOH A 8 208 38 HOH HOH . 
L 6 HOH A 9 209 74 HOH HOH . 
L 6 HOH A 10 210 66 HOH HOH . 
L 6 HOH A 11 211 10 HOH HOH . 
L 6 HOH A 12 212 8 HOH HOH . 
L 6 HOH A 13 213 39 HOH HOH . 
L 6 HOH A 14 214 72 HOH HOH . 
L 6 HOH A 15 215 31 HOH HOH . 
L 6 HOH A 16 216 35 HOH HOH . 
L 6 HOH A 17 217 25 HOH HOH . 
L 6 HOH A 18 218 28 HOH HOH . 
L 6 HOH A 19 219 7 HOH HOH . 
L 6 HOH A 20 220 40 HOH HOH . 
L 6 HOH A 21 221 41 HOH HOH . 
L 6 HOH A 22 222 17 HOH HOH . 
L 6 HOH A 23 223 47 HOH HOH . 
L 6 HOH A 24 224 64 HOH HOH . 
L 6 HOH A 25 225 70 HOH HOH . 
M 6 HOH C 1 201 52 HOH HOH . 
M 6 HOH C 2 202 3 HOH HOH . 
M 6 HOH C 3 203 50 HOH HOH . 
M 6 HOH C 4 204 67 HOH HOH . 
M 6 HOH C 5 205 53 HOH HOH . 
M 6 HOH C 6 206 42 HOH HOH . 
M 6 HOH C 7 207 49 HOH HOH . 
M 6 HOH C 8 208 55 HOH HOH . 
M 6 HOH C 9 209 68 HOH HOH . 
M 6 HOH C 10 210 34 HOH HOH . 
M 6 HOH C 11 211 65 HOH HOH . 
M 6 HOH C 12 212 76 HOH HOH . 
M 6 HOH C 13 213 21 HOH HOH . 
N 6 HOH E 1 201 33 HOH HOH . 
N 6 HOH E 2 202 56 HOH HOH . 
N 6 HOH E 3 203 63 HOH HOH . 
N 6 HOH E 4 204 48 HOH HOH . 
N 6 HOH E 5 205 32 HOH HOH . 
N 6 HOH E 6 206 6 HOH HOH . 
N 6 HOH E 7 207 61 HOH HOH . 
N 6 HOH E 8 208 5 HOH HOH . 
N 6 HOH E 9 209 24 HOH HOH . 
N 6 HOH E 10 210 11 HOH HOH . 
N 6 HOH E 11 211 23 HOH HOH . 
N 6 HOH E 12 212 13 HOH HOH . 
N 6 HOH E 13 213 71 HOH HOH . 
N 6 HOH E 14 214 62 HOH HOH . 
N 6 HOH E 15 215 51 HOH HOH . 
N 6 HOH E 16 216 59 HOH HOH . 
N 6 HOH E 17 217 57 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               -51.844 
_atom_site.Cartn_y               0.786 
_atom_site.Cartn_z               12.527 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        36.89 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           104 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           1 
#