data_6TRW # _model_server_result.job_id 4eskAuIJ94qkYRXECP4i_A _model_server_result.datetime_utc '2024-10-19 15:43:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6trw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":901}' # _entry.id 6TRW # _exptl.entry_id 6TRW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TRW _cell.length_a 163.045 _cell.length_b 245.283 _cell.length_c 261.439 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TRW _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G,J,M 1 1,2 B,C,E,F,H,I,K,L,N,O 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_557 x,-y,-z+2 1 0 0 0 -1 0 0 0 -1 0 0 522.878 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ARG 163 A ARG 158 1_555 G NA NA . A NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.625 ? metalc ? metalc2 A O GLN 279 A GLN 274 1_555 G NA NA . A NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.917 ? metalc ? metalc3 A OD1 ASP 283 A ASP 278 1_555 G NA NA . A NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc4 A OH TYR 285 A TYR 280 1_555 G NA NA . A NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.985 ? metalc ? metalc5 B O ARG 163 B ARG 158 1_555 H NA NA . B NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? metalc ? metalc6 B O GLN 279 B GLN 274 1_555 H NA NA . B NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.88 ? metalc ? metalc7 B OD1 ASP 283 B ASP 278 1_555 H NA NA . B NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.809 ? metalc ? metalc8 B OH TYR 285 B TYR 280 1_555 H NA NA . B NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.763 ? metalc ? metalc9 C O ARG 163 C ARG 158 1_555 I NA NA . C NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc10 C O GLN 279 C GLN 274 1_555 I NA NA . C NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.07 ? metalc ? metalc11 C OD1 ASP 283 C ASP 278 1_555 I NA NA . C NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.706 ? metalc ? metalc12 C OH TYR 285 C TYR 280 1_555 I NA NA . C NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.835 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6TRW _atom_sites.fract_transf_matrix[1][1] 0.006133 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004077 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003825 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 NA A 1 901 3 NA NA . H 3 NA B 1 901 1 NA NA . I 3 NA C 1 901 2 NA NA . J 4 HOH A 1 1001 38 HOH HOH . J 4 HOH A 2 1002 27 HOH HOH . J 4 HOH A 3 1003 30 HOH HOH . J 4 HOH A 4 1004 18 HOH HOH . J 4 HOH A 5 1005 26 HOH HOH . J 4 HOH A 6 1006 17 HOH HOH . J 4 HOH A 7 1007 37 HOH HOH . J 4 HOH A 8 1008 6 HOH HOH . J 4 HOH A 9 1009 25 HOH HOH . J 4 HOH A 10 1010 20 HOH HOH . J 4 HOH A 11 1011 36 HOH HOH . J 4 HOH A 12 1012 7 HOH HOH . J 4 HOH A 13 1013 31 HOH HOH . K 4 HOH B 1 1001 29 HOH HOH . K 4 HOH B 2 1002 22 HOH HOH . K 4 HOH B 3 1003 32 HOH HOH . K 4 HOH B 4 1004 35 HOH HOH . K 4 HOH B 5 1005 21 HOH HOH . K 4 HOH B 6 1006 19 HOH HOH . K 4 HOH B 7 1007 4 HOH HOH . K 4 HOH B 8 1008 5 HOH HOH . K 4 HOH B 9 1009 33 HOH HOH . L 4 HOH C 1 1001 10 HOH HOH . L 4 HOH C 2 1002 39 HOH HOH . L 4 HOH C 3 1003 40 HOH HOH . L 4 HOH C 4 1004 16 HOH HOH . L 4 HOH C 5 1005 24 HOH HOH . L 4 HOH C 6 1006 34 HOH HOH . L 4 HOH C 7 1007 23 HOH HOH . L 4 HOH C 8 1008 8 HOH HOH . M 4 HOH D 1 101 12 HOH HOH . N 4 HOH E 1 101 14 HOH HOH . O 4 HOH F 1 101 13 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x 79.902 _atom_site.Cartn_y 38.337 _atom_site.Cartn_z 229.43 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 66.86 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 901 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 373 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #