data_6TRX
#
_model_server_result.job_id            jYptCKeMP0l1De8atPnLCg 
_model_server_result.datetime_utc      '2024-11-28 18:43:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6trx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1003}' 
#
_entry.id    6TRX 
#
_exptl.entry_id    6TRX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6TRX 
_cell.length_a            163.963 
_cell.length_b            246.288 
_cell.length_c            261.805 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6TRX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,L,M,N,O,P,R 1 1 
B,H,I,J,K,Q 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 J N N 
? 4 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ARG 163 B ARG 158 1_555 F NA NA . B NA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? 
metalc ? metalc2 A O GLN 279 B GLN 274 1_555 F NA NA . B NA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.918 ? 
metalc ? metalc3 A OD1 ASP 283 B ASP 278 1_555 F NA NA . B NA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? 
metalc ? metalc4 A OH TYR 285 B TYR 280 1_555 F NA NA . B NA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.877 ? 
metalc ? metalc5 B O ARG 163 A ARG 158 1_555 J NA NA . A NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? 
metalc ? metalc6 B O GLN 279 A GLN 274 1_555 J NA NA . A NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.95 ? 
metalc ? metalc7 B OD1 ASP 283 A ASP 278 1_555 J NA NA . A NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? 
metalc ? metalc8 B OH TYR 285 A TYR 280 1_555 J NA NA . A NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.89 ? 
metalc ? metalc9 C O ARG 163 C ARG 158 1_555 N NA NA . C NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? 
metalc ? metalc10 C O GLN 279 C GLN 274 1_555 N NA NA . C NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.064 ? 
metalc ? metalc11 C O GLU 280 C GLU 275 1_555 N NA NA . C NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.186 ? 
metalc ? metalc12 C OD1 ASP 283 C ASP 278 1_555 N NA NA . C NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? 
metalc ? metalc13 C OH TYR 285 C TYR 280 1_555 N NA NA . C NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.055 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6TRX 
_atom_sites.fract_transf_matrix[1][1]    0.006099 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00406 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00382 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 TMO B 1 1001 1001 TMO TMO . 
E 3 9XH B 1 1002 2 9XH INX . 
F 4 NA B 1 1003 1 NA NA . 
G 5 PO4 B 1 1004 2 PO4 PO4 . 
H 2 TMO A 1 901 901 TMO TMO . 
I 3 9XH A 1 902 3 9XH INX . 
J 4 NA A 1 903 2 NA NA . 
K 5 PO4 A 1 904 3 PO4 PO4 . 
L 2 TMO C 1 901 901 TMO TMO . 
M 3 9XH C 1 902 1 9XH INX . 
N 4 NA C 1 903 3 NA NA . 
O 5 PO4 C 1 904 1 PO4 PO4 . 
P 6 HOH B 1 1101 144 HOH HOH . 
P 6 HOH B 2 1102 103 HOH HOH . 
P 6 HOH B 3 1103 85 HOH HOH . 
P 6 HOH B 4 1104 215 HOH HOH . 
P 6 HOH B 5 1105 54 HOH HOH . 
P 6 HOH B 6 1106 124 HOH HOH . 
P 6 HOH B 7 1107 227 HOH HOH . 
P 6 HOH B 8 1108 255 HOH HOH . 
P 6 HOH B 9 1109 228 HOH HOH . 
P 6 HOH B 10 1110 266 HOH HOH . 
P 6 HOH B 11 1111 89 HOH HOH . 
P 6 HOH B 12 1112 7 HOH HOH . 
P 6 HOH B 13 1113 14 HOH HOH . 
P 6 HOH B 14 1114 155 HOH HOH . 
P 6 HOH B 15 1115 307 HOH HOH . 
P 6 HOH B 16 1116 277 HOH HOH . 
P 6 HOH B 17 1117 236 HOH HOH . 
P 6 HOH B 18 1118 191 HOH HOH . 
P 6 HOH B 19 1119 278 HOH HOH . 
P 6 HOH B 20 1120 259 HOH HOH . 
P 6 HOH B 21 1121 207 HOH HOH . 
P 6 HOH B 22 1122 247 HOH HOH . 
P 6 HOH B 23 1123 254 HOH HOH . 
P 6 HOH B 24 1124 10 HOH HOH . 
P 6 HOH B 25 1125 258 HOH HOH . 
P 6 HOH B 26 1126 3 HOH HOH . 
P 6 HOH B 27 1127 11 HOH HOH . 
P 6 HOH B 28 1128 213 HOH HOH . 
P 6 HOH B 29 1129 276 HOH HOH . 
P 6 HOH B 30 1130 285 HOH HOH . 
P 6 HOH B 31 1131 260 HOH HOH . 
P 6 HOH B 32 1132 240 HOH HOH . 
P 6 HOH B 33 1133 225 HOH HOH . 
P 6 HOH B 34 1134 291 HOH HOH . 
P 6 HOH B 35 1135 233 HOH HOH . 
P 6 HOH B 36 1136 279 HOH HOH . 
P 6 HOH B 37 1137 275 HOH HOH . 
P 6 HOH B 38 1138 308 HOH HOH . 
P 6 HOH B 39 1139 237 HOH HOH . 
P 6 HOH B 40 1140 23 HOH HOH . 
P 6 HOH B 41 1141 262 HOH HOH . 
P 6 HOH B 42 1142 218 HOH HOH . 
P 6 HOH B 43 1143 264 HOH HOH . 
P 6 HOH B 44 1144 295 HOH HOH . 
P 6 HOH B 45 1145 248 HOH HOH . 
P 6 HOH B 46 1146 219 HOH HOH . 
P 6 HOH B 47 1147 281 HOH HOH . 
P 6 HOH B 48 1148 250 HOH HOH . 
P 6 HOH B 49 1149 305 HOH HOH . 
P 6 HOH B 50 1150 316 HOH HOH . 
P 6 HOH B 51 1151 274 HOH HOH . 
P 6 HOH B 52 1152 312 HOH HOH . 
Q 6 HOH A 1 1001 5 HOH HOH . 
Q 6 HOH A 2 1002 283 HOH HOH . 
Q 6 HOH A 3 1003 309 HOH HOH . 
Q 6 HOH A 4 1004 272 HOH HOH . 
Q 6 HOH A 5 1005 256 HOH HOH . 
Q 6 HOH A 6 1006 257 HOH HOH . 
Q 6 HOH A 7 1007 206 HOH HOH . 
Q 6 HOH A 8 1008 107 HOH HOH . 
Q 6 HOH A 9 1009 31 HOH HOH . 
Q 6 HOH A 10 1010 234 HOH HOH . 
Q 6 HOH A 11 1011 229 HOH HOH . 
Q 6 HOH A 12 1012 282 HOH HOH . 
Q 6 HOH A 13 1013 30 HOH HOH . 
Q 6 HOH A 14 1014 243 HOH HOH . 
Q 6 HOH A 15 1015 43 HOH HOH . 
Q 6 HOH A 16 1016 208 HOH HOH . 
Q 6 HOH A 17 1017 292 HOH HOH . 
Q 6 HOH A 18 1018 131 HOH HOH . 
Q 6 HOH A 19 1019 1 HOH HOH . 
Q 6 HOH A 20 1020 261 HOH HOH . 
Q 6 HOH A 21 1021 21 HOH HOH . 
Q 6 HOH A 22 1022 211 HOH HOH . 
Q 6 HOH A 23 1023 296 HOH HOH . 
Q 6 HOH A 24 1024 231 HOH HOH . 
Q 6 HOH A 25 1025 214 HOH HOH . 
Q 6 HOH A 26 1026 286 HOH HOH . 
Q 6 HOH A 27 1027 223 HOH HOH . 
Q 6 HOH A 28 1028 265 HOH HOH . 
Q 6 HOH A 29 1029 244 HOH HOH . 
Q 6 HOH A 30 1030 222 HOH HOH . 
Q 6 HOH A 31 1031 241 HOH HOH . 
Q 6 HOH A 32 1032 252 HOH HOH . 
Q 6 HOH A 33 1033 314 HOH HOH . 
Q 6 HOH A 34 1034 238 HOH HOH . 
Q 6 HOH A 35 1035 203 HOH HOH . 
Q 6 HOH A 36 1036 313 HOH HOH . 
Q 6 HOH A 37 1037 311 HOH HOH . 
R 6 HOH C 1 1001 132 HOH HOH . 
R 6 HOH C 2 1002 41 HOH HOH . 
R 6 HOH C 3 1003 147 HOH HOH . 
R 6 HOH C 4 1004 310 HOH HOH . 
R 6 HOH C 5 1005 52 HOH HOH . 
R 6 HOH C 6 1006 298 HOH HOH . 
R 6 HOH C 7 1007 6 HOH HOH . 
R 6 HOH C 8 1008 102 HOH HOH . 
R 6 HOH C 9 1009 246 HOH HOH . 
R 6 HOH C 10 1010 267 HOH HOH . 
R 6 HOH C 11 1011 20 HOH HOH . 
R 6 HOH C 12 1012 235 HOH HOH . 
R 6 HOH C 13 1013 50 HOH HOH . 
R 6 HOH C 14 1014 273 HOH HOH . 
R 6 HOH C 15 1015 226 HOH HOH . 
R 6 HOH C 16 1016 230 HOH HOH . 
R 6 HOH C 17 1017 232 HOH HOH . 
R 6 HOH C 18 1018 118 HOH HOH . 
R 6 HOH C 19 1019 220 HOH HOH . 
R 6 HOH C 20 1020 210 HOH HOH . 
R 6 HOH C 21 1021 263 HOH HOH . 
R 6 HOH C 22 1022 9 HOH HOH . 
R 6 HOH C 23 1023 209 HOH HOH . 
R 6 HOH C 24 1024 212 HOH HOH . 
R 6 HOH C 25 1025 2 HOH HOH . 
R 6 HOH C 26 1026 293 HOH HOH . 
R 6 HOH C 27 1027 249 HOH HOH . 
R 6 HOH C 28 1028 242 HOH HOH . 
R 6 HOH C 29 1029 284 HOH HOH . 
R 6 HOH C 30 1030 224 HOH HOH . 
R 6 HOH C 31 1031 251 HOH HOH . 
R 6 HOH C 32 1032 239 HOH HOH . 
R 6 HOH C 33 1033 253 HOH HOH . 
R 6 HOH C 34 1034 317 HOH HOH . 
R 6 HOH C 35 1035 245 HOH HOH . 
R 6 HOH C 36 1036 221 HOH HOH . 
R 6 HOH C 37 1037 290 HOH HOH . 
R 6 HOH C 38 1038 315 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -1.753 
_atom_site.Cartn_y               38.52 
_atom_site.Cartn_z               -32.275 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        66.88 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           1003 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           60 
_model_server_stats.create_model_time_ms    140 
_model_server_stats.query_time_ms           255 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           1 
#