data_6TRX # _model_server_result.job_id dZgGAYbd_BwMqng3WI2MnA _model_server_result.datetime_utc '2024-11-05 09:29:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6trx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":904}' # _entry.id 6TRX # _exptl.entry_id 6TRX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TRX _cell.length_a 163.963 _cell.length_b 246.288 _cell.length_c 261.805 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TRX _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,L,M,N,O,P,R 1 1 B,H,I,J,K,Q 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 K N N ? 5 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ARG 163 B ARG 158 1_555 F NA NA . B NA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? metalc ? metalc2 A O GLN 279 B GLN 274 1_555 F NA NA . B NA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.918 ? metalc ? metalc3 A OD1 ASP 283 B ASP 278 1_555 F NA NA . B NA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc4 A OH TYR 285 B TYR 280 1_555 F NA NA . B NA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.877 ? metalc ? metalc5 B O ARG 163 A ARG 158 1_555 J NA NA . A NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc6 B O GLN 279 A GLN 274 1_555 J NA NA . A NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.95 ? metalc ? metalc7 B OD1 ASP 283 A ASP 278 1_555 J NA NA . A NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc8 B OH TYR 285 A TYR 280 1_555 J NA NA . A NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.89 ? metalc ? metalc9 C O ARG 163 C ARG 158 1_555 N NA NA . C NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? metalc ? metalc10 C O GLN 279 C GLN 274 1_555 N NA NA . C NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.064 ? metalc ? metalc11 C O GLU 280 C GLU 275 1_555 N NA NA . C NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.186 ? metalc ? metalc12 C OD1 ASP 283 C ASP 278 1_555 N NA NA . C NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? metalc ? metalc13 C OH TYR 285 C TYR 280 1_555 N NA NA . C NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.055 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 331 n n P O2 PO4 sing 332 n n P O3 PO4 sing 333 n n P O4 PO4 sing 334 n n # _atom_sites.entry_id 6TRX _atom_sites.fract_transf_matrix[1][1] 0.006099 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00406 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00382 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 TMO B 1 1001 1001 TMO TMO . E 3 9XH B 1 1002 2 9XH INX . F 4 NA B 1 1003 1 NA NA . G 5 PO4 B 1 1004 2 PO4 PO4 . H 2 TMO A 1 901 901 TMO TMO . I 3 9XH A 1 902 3 9XH INX . J 4 NA A 1 903 2 NA NA . K 5 PO4 A 1 904 3 PO4 PO4 . L 2 TMO C 1 901 901 TMO TMO . M 3 9XH C 1 902 1 9XH INX . N 4 NA C 1 903 3 NA NA . O 5 PO4 C 1 904 1 PO4 PO4 . P 6 HOH B 1 1101 144 HOH HOH . P 6 HOH B 2 1102 103 HOH HOH . P 6 HOH B 3 1103 85 HOH HOH . P 6 HOH B 4 1104 215 HOH HOH . P 6 HOH B 5 1105 54 HOH HOH . P 6 HOH B 6 1106 124 HOH HOH . P 6 HOH B 7 1107 227 HOH HOH . P 6 HOH B 8 1108 255 HOH HOH . P 6 HOH B 9 1109 228 HOH HOH . P 6 HOH B 10 1110 266 HOH HOH . P 6 HOH B 11 1111 89 HOH HOH . P 6 HOH B 12 1112 7 HOH HOH . P 6 HOH B 13 1113 14 HOH HOH . P 6 HOH B 14 1114 155 HOH HOH . P 6 HOH B 15 1115 307 HOH HOH . P 6 HOH B 16 1116 277 HOH HOH . P 6 HOH B 17 1117 236 HOH HOH . P 6 HOH B 18 1118 191 HOH HOH . P 6 HOH B 19 1119 278 HOH HOH . P 6 HOH B 20 1120 259 HOH HOH . P 6 HOH B 21 1121 207 HOH HOH . P 6 HOH B 22 1122 247 HOH HOH . P 6 HOH B 23 1123 254 HOH HOH . P 6 HOH B 24 1124 10 HOH HOH . P 6 HOH B 25 1125 258 HOH HOH . P 6 HOH B 26 1126 3 HOH HOH . P 6 HOH B 27 1127 11 HOH HOH . P 6 HOH B 28 1128 213 HOH HOH . P 6 HOH B 29 1129 276 HOH HOH . P 6 HOH B 30 1130 285 HOH HOH . P 6 HOH B 31 1131 260 HOH HOH . P 6 HOH B 32 1132 240 HOH HOH . P 6 HOH B 33 1133 225 HOH HOH . P 6 HOH B 34 1134 291 HOH HOH . P 6 HOH B 35 1135 233 HOH HOH . P 6 HOH B 36 1136 279 HOH HOH . P 6 HOH B 37 1137 275 HOH HOH . P 6 HOH B 38 1138 308 HOH HOH . P 6 HOH B 39 1139 237 HOH HOH . P 6 HOH B 40 1140 23 HOH HOH . P 6 HOH B 41 1141 262 HOH HOH . P 6 HOH B 42 1142 218 HOH HOH . P 6 HOH B 43 1143 264 HOH HOH . P 6 HOH B 44 1144 295 HOH HOH . P 6 HOH B 45 1145 248 HOH HOH . P 6 HOH B 46 1146 219 HOH HOH . P 6 HOH B 47 1147 281 HOH HOH . P 6 HOH B 48 1148 250 HOH HOH . P 6 HOH B 49 1149 305 HOH HOH . P 6 HOH B 50 1150 316 HOH HOH . P 6 HOH B 51 1151 274 HOH HOH . P 6 HOH B 52 1152 312 HOH HOH . Q 6 HOH A 1 1001 5 HOH HOH . Q 6 HOH A 2 1002 283 HOH HOH . Q 6 HOH A 3 1003 309 HOH HOH . Q 6 HOH A 4 1004 272 HOH HOH . Q 6 HOH A 5 1005 256 HOH HOH . Q 6 HOH A 6 1006 257 HOH HOH . Q 6 HOH A 7 1007 206 HOH HOH . Q 6 HOH A 8 1008 107 HOH HOH . Q 6 HOH A 9 1009 31 HOH HOH . Q 6 HOH A 10 1010 234 HOH HOH . Q 6 HOH A 11 1011 229 HOH HOH . Q 6 HOH A 12 1012 282 HOH HOH . Q 6 HOH A 13 1013 30 HOH HOH . Q 6 HOH A 14 1014 243 HOH HOH . Q 6 HOH A 15 1015 43 HOH HOH . Q 6 HOH A 16 1016 208 HOH HOH . Q 6 HOH A 17 1017 292 HOH HOH . Q 6 HOH A 18 1018 131 HOH HOH . Q 6 HOH A 19 1019 1 HOH HOH . Q 6 HOH A 20 1020 261 HOH HOH . Q 6 HOH A 21 1021 21 HOH HOH . Q 6 HOH A 22 1022 211 HOH HOH . Q 6 HOH A 23 1023 296 HOH HOH . Q 6 HOH A 24 1024 231 HOH HOH . Q 6 HOH A 25 1025 214 HOH HOH . Q 6 HOH A 26 1026 286 HOH HOH . Q 6 HOH A 27 1027 223 HOH HOH . Q 6 HOH A 28 1028 265 HOH HOH . Q 6 HOH A 29 1029 244 HOH HOH . Q 6 HOH A 30 1030 222 HOH HOH . Q 6 HOH A 31 1031 241 HOH HOH . Q 6 HOH A 32 1032 252 HOH HOH . Q 6 HOH A 33 1033 314 HOH HOH . Q 6 HOH A 34 1034 238 HOH HOH . Q 6 HOH A 35 1035 203 HOH HOH . Q 6 HOH A 36 1036 313 HOH HOH . Q 6 HOH A 37 1037 311 HOH HOH . R 6 HOH C 1 1001 132 HOH HOH . R 6 HOH C 2 1002 41 HOH HOH . R 6 HOH C 3 1003 147 HOH HOH . R 6 HOH C 4 1004 310 HOH HOH . R 6 HOH C 5 1005 52 HOH HOH . R 6 HOH C 6 1006 298 HOH HOH . R 6 HOH C 7 1007 6 HOH HOH . R 6 HOH C 8 1008 102 HOH HOH . R 6 HOH C 9 1009 246 HOH HOH . R 6 HOH C 10 1010 267 HOH HOH . R 6 HOH C 11 1011 20 HOH HOH . R 6 HOH C 12 1012 235 HOH HOH . R 6 HOH C 13 1013 50 HOH HOH . R 6 HOH C 14 1014 273 HOH HOH . R 6 HOH C 15 1015 226 HOH HOH . R 6 HOH C 16 1016 230 HOH HOH . R 6 HOH C 17 1017 232 HOH HOH . R 6 HOH C 18 1018 118 HOH HOH . R 6 HOH C 19 1019 220 HOH HOH . R 6 HOH C 20 1020 210 HOH HOH . R 6 HOH C 21 1021 263 HOH HOH . R 6 HOH C 22 1022 9 HOH HOH . R 6 HOH C 23 1023 209 HOH HOH . R 6 HOH C 24 1024 212 HOH HOH . R 6 HOH C 25 1025 2 HOH HOH . R 6 HOH C 26 1026 293 HOH HOH . R 6 HOH C 27 1027 249 HOH HOH . R 6 HOH C 28 1028 242 HOH HOH . R 6 HOH C 29 1029 284 HOH HOH . R 6 HOH C 30 1030 224 HOH HOH . R 6 HOH C 31 1031 251 HOH HOH . R 6 HOH C 32 1032 239 HOH HOH . R 6 HOH C 33 1033 253 HOH HOH . R 6 HOH C 34 1034 317 HOH HOH . R 6 HOH C 35 1035 245 HOH HOH . R 6 HOH C 36 1036 221 HOH HOH . R 6 HOH C 37 1037 290 HOH HOH . R 6 HOH C 38 1038 315 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . O 5 -59.474 17.639 -62.385 1 140.1 ? P PO4 904 C 1 HETATM 2 O O1 PO4 . . . O 5 -60.69 18.053 -63.172 1 148.64 ? O1 PO4 904 C 1 HETATM 3 O O2 PO4 . . . O 5 -58.363 18.637 -62.607 1 143.9 ? O2 PO4 904 C 1 HETATM 4 O O3 PO4 . . . O 5 -59.036 16.274 -62.861 1 135.99 ? O3 PO4 904 C 1 HETATM 5 O O4 PO4 . . . O 5 -59.826 17.609 -60.917 1 134.11 ? O4 PO4 904 C 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #