data_6TS5 # _model_server_result.job_id 2moilwXH-Xm1_MmUcyQhpg _model_server_result.datetime_utc '2024-11-22 14:23:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ts5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 6TS5 # _exptl.entry_id 6TS5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TS5 _cell.length_a 59.99 _cell.length_b 60.6 _cell.length_c 66.92 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TS5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 A CYS 40 1_555 A SG CYS 45 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 127 A CYS 136 1_555 A SG CYS 194 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf3 A SG CYS 158 A CYS 168 1_555 A SG CYS 173 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 A SG CYS 184 A CYS 191 1_555 A SG CYS 212 A CYS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 6TS5 _atom_sites.fract_transf_matrix[1][1] 0.016669 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016502 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014943 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NW2 A 1 301 1 NW2 LI1 . C 3 SO4 A 1 302 301 SO4 SO4 . D 3 SO4 A 1 303 302 SO4 SO4 . E 3 SO4 A 1 304 303 SO4 SO4 . F 4 DMS A 1 305 401 DMS DMS . G 4 DMS A 1 306 501 DMS DMS . H 5 HOH A 1 401 255 HOH HOH . H 5 HOH A 2 402 182 HOH HOH . H 5 HOH A 3 403 201 HOH HOH . H 5 HOH A 4 404 222 HOH HOH . H 5 HOH A 5 405 244 HOH HOH . H 5 HOH A 6 406 44 HOH HOH . H 5 HOH A 7 407 96 HOH HOH . H 5 HOH A 8 408 67 HOH HOH . H 5 HOH A 9 409 62 HOH HOH . H 5 HOH A 10 410 170 HOH HOH . H 5 HOH A 11 411 154 HOH HOH . H 5 HOH A 12 412 262 HOH HOH . H 5 HOH A 13 413 171 HOH HOH . H 5 HOH A 14 414 155 HOH HOH . H 5 HOH A 15 415 174 HOH HOH . H 5 HOH A 16 416 142 HOH HOH . H 5 HOH A 17 417 126 HOH HOH . H 5 HOH A 18 418 188 HOH HOH . H 5 HOH A 19 419 235 HOH HOH . H 5 HOH A 20 420 190 HOH HOH . H 5 HOH A 21 421 147 HOH HOH . H 5 HOH A 22 422 89 HOH HOH . H 5 HOH A 23 423 134 HOH HOH . H 5 HOH A 24 424 99 HOH HOH . H 5 HOH A 25 425 73 HOH HOH . H 5 HOH A 26 426 115 HOH HOH . H 5 HOH A 27 427 160 HOH HOH . H 5 HOH A 28 428 24 HOH HOH . H 5 HOH A 29 429 128 HOH HOH . H 5 HOH A 30 430 108 HOH HOH . H 5 HOH A 31 431 48 HOH HOH . H 5 HOH A 32 432 11 HOH HOH . H 5 HOH A 33 433 196 HOH HOH . H 5 HOH A 34 434 157 HOH HOH . H 5 HOH A 35 435 165 HOH HOH . H 5 HOH A 36 436 173 HOH HOH . H 5 HOH A 37 437 217 HOH HOH . H 5 HOH A 38 438 59 HOH HOH . H 5 HOH A 39 439 3 HOH HOH . H 5 HOH A 40 440 60 HOH HOH . H 5 HOH A 41 441 80 HOH HOH . H 5 HOH A 42 442 113 HOH HOH . H 5 HOH A 43 443 57 HOH HOH . H 5 HOH A 44 444 26 HOH HOH . H 5 HOH A 45 445 116 HOH HOH . H 5 HOH A 46 446 9 HOH HOH . H 5 HOH A 47 447 70 HOH HOH . H 5 HOH A 48 448 187 HOH HOH . H 5 HOH A 49 449 85 HOH HOH . H 5 HOH A 50 450 238 HOH HOH . H 5 HOH A 51 451 18 HOH HOH . H 5 HOH A 52 452 161 HOH HOH . H 5 HOH A 53 453 69 HOH HOH . H 5 HOH A 54 454 208 HOH HOH . H 5 HOH A 55 455 42 HOH HOH . H 5 HOH A 56 456 123 HOH HOH . H 5 HOH A 57 457 20 HOH HOH . H 5 HOH A 58 458 64 HOH HOH . H 5 HOH A 59 459 110 HOH HOH . H 5 HOH A 60 460 216 HOH HOH . H 5 HOH A 61 461 19 HOH HOH . H 5 HOH A 62 462 143 HOH HOH . H 5 HOH A 63 463 233 HOH HOH . H 5 HOH A 64 464 63 HOH HOH . H 5 HOH A 65 465 118 HOH HOH . H 5 HOH A 66 466 13 HOH HOH . H 5 HOH A 67 467 125 HOH HOH . H 5 HOH A 68 468 5 HOH HOH . H 5 HOH A 69 469 106 HOH HOH . H 5 HOH A 70 470 87 HOH HOH . H 5 HOH A 71 471 38 HOH HOH . H 5 HOH A 72 472 77 HOH HOH . H 5 HOH A 73 473 23 HOH HOH . H 5 HOH A 74 474 250 HOH HOH . H 5 HOH A 75 475 180 HOH HOH . H 5 HOH A 76 476 6 HOH HOH . H 5 HOH A 77 477 50 HOH HOH . H 5 HOH A 78 478 140 HOH HOH . H 5 HOH A 79 479 86 HOH HOH . H 5 HOH A 80 480 237 HOH HOH . H 5 HOH A 81 481 35 HOH HOH . H 5 HOH A 82 482 205 HOH HOH . H 5 HOH A 83 483 227 HOH HOH . H 5 HOH A 84 484 97 HOH HOH . H 5 HOH A 85 485 197 HOH HOH . H 5 HOH A 86 486 92 HOH HOH . H 5 HOH A 87 487 37 HOH HOH . H 5 HOH A 88 488 181 HOH HOH . H 5 HOH A 89 489 10 HOH HOH . H 5 HOH A 90 490 4 HOH HOH . H 5 HOH A 91 491 14 HOH HOH . H 5 HOH A 92 492 8 HOH HOH . H 5 HOH A 93 493 199 HOH HOH . H 5 HOH A 94 494 192 HOH HOH . H 5 HOH A 95 495 54 HOH HOH . H 5 HOH A 96 496 25 HOH HOH . H 5 HOH A 97 497 112 HOH HOH . H 5 HOH A 98 498 22 HOH HOH . H 5 HOH A 99 499 21 HOH HOH . H 5 HOH A 100 500 269 HOH HOH . H 5 HOH A 101 501 130 HOH HOH . H 5 HOH A 102 502 146 HOH HOH . H 5 HOH A 103 503 172 HOH HOH . H 5 HOH A 104 504 52 HOH HOH . H 5 HOH A 105 505 179 HOH HOH . H 5 HOH A 106 506 230 HOH HOH . H 5 HOH A 107 507 200 HOH HOH . H 5 HOH A 108 508 68 HOH HOH . H 5 HOH A 109 509 27 HOH HOH . H 5 HOH A 110 510 45 HOH HOH . H 5 HOH A 111 511 152 HOH HOH . H 5 HOH A 112 512 7 HOH HOH . H 5 HOH A 113 513 158 HOH HOH . H 5 HOH A 114 514 175 HOH HOH . H 5 HOH A 115 515 214 HOH HOH . H 5 HOH A 116 516 243 HOH HOH . H 5 HOH A 117 517 100 HOH HOH . H 5 HOH A 118 518 34 HOH HOH . H 5 HOH A 119 519 261 HOH HOH . H 5 HOH A 120 520 193 HOH HOH . H 5 HOH A 121 521 135 HOH HOH . H 5 HOH A 122 522 114 HOH HOH . H 5 HOH A 123 523 138 HOH HOH . H 5 HOH A 124 524 2 HOH HOH . H 5 HOH A 125 525 1 HOH HOH . H 5 HOH A 126 526 151 HOH HOH . H 5 HOH A 127 527 189 HOH HOH . H 5 HOH A 128 528 30 HOH HOH . H 5 HOH A 129 529 206 HOH HOH . H 5 HOH A 130 530 159 HOH HOH . H 5 HOH A 131 531 15 HOH HOH . H 5 HOH A 132 532 107 HOH HOH . H 5 HOH A 133 533 98 HOH HOH . H 5 HOH A 134 534 132 HOH HOH . H 5 HOH A 135 535 137 HOH HOH . H 5 HOH A 136 536 219 HOH HOH . H 5 HOH A 137 537 212 HOH HOH . H 5 HOH A 138 538 39 HOH HOH . H 5 HOH A 139 539 248 HOH HOH . H 5 HOH A 140 540 215 HOH HOH . H 5 HOH A 141 541 195 HOH HOH . H 5 HOH A 142 542 178 HOH HOH . H 5 HOH A 143 543 12 HOH HOH . H 5 HOH A 144 544 47 HOH HOH . H 5 HOH A 145 545 90 HOH HOH . H 5 HOH A 146 546 103 HOH HOH . H 5 HOH A 147 547 61 HOH HOH . H 5 HOH A 148 548 104 HOH HOH . H 5 HOH A 149 549 65 HOH HOH . H 5 HOH A 150 550 75 HOH HOH . H 5 HOH A 151 551 91 HOH HOH . H 5 HOH A 152 552 121 HOH HOH . H 5 HOH A 153 553 234 HOH HOH . H 5 HOH A 154 554 220 HOH HOH . H 5 HOH A 155 555 268 HOH HOH . H 5 HOH A 156 556 51 HOH HOH . H 5 HOH A 157 557 209 HOH HOH . H 5 HOH A 158 558 31 HOH HOH . H 5 HOH A 159 559 144 HOH HOH . H 5 HOH A 160 560 49 HOH HOH . H 5 HOH A 161 561 249 HOH HOH . H 5 HOH A 162 562 46 HOH HOH . H 5 HOH A 163 563 72 HOH HOH . H 5 HOH A 164 564 83 HOH HOH . H 5 HOH A 165 565 184 HOH HOH . H 5 HOH A 166 566 56 HOH HOH . H 5 HOH A 167 567 76 HOH HOH . H 5 HOH A 168 568 102 HOH HOH . H 5 HOH A 169 569 41 HOH HOH . H 5 HOH A 170 570 240 HOH HOH . H 5 HOH A 171 571 94 HOH HOH . H 5 HOH A 172 572 117 HOH HOH . H 5 HOH A 173 573 55 HOH HOH . H 5 HOH A 174 574 213 HOH HOH . H 5 HOH A 175 575 247 HOH HOH . H 5 HOH A 176 576 53 HOH HOH . H 5 HOH A 177 577 198 HOH HOH . H 5 HOH A 178 578 84 HOH HOH . H 5 HOH A 179 579 74 HOH HOH . H 5 HOH A 180 580 111 HOH HOH . H 5 HOH A 181 581 33 HOH HOH . H 5 HOH A 182 582 139 HOH HOH . H 5 HOH A 183 583 82 HOH HOH . H 5 HOH A 184 584 241 HOH HOH . H 5 HOH A 185 585 163 HOH HOH . H 5 HOH A 186 586 176 HOH HOH . H 5 HOH A 187 587 40 HOH HOH . H 5 HOH A 188 588 29 HOH HOH . H 5 HOH A 189 589 28 HOH HOH . H 5 HOH A 190 590 79 HOH HOH . H 5 HOH A 191 591 185 HOH HOH . H 5 HOH A 192 592 210 HOH HOH . H 5 HOH A 193 593 207 HOH HOH . H 5 HOH A 194 594 95 HOH HOH . H 5 HOH A 195 595 17 HOH HOH . H 5 HOH A 196 596 221 HOH HOH . H 5 HOH A 197 597 224 HOH HOH . H 5 HOH A 198 598 109 HOH HOH . H 5 HOH A 199 599 141 HOH HOH . H 5 HOH A 200 600 148 HOH HOH . H 5 HOH A 201 601 177 HOH HOH . H 5 HOH A 202 602 120 HOH HOH . H 5 HOH A 203 603 133 HOH HOH . H 5 HOH A 204 604 119 HOH HOH . H 5 HOH A 205 605 122 HOH HOH . H 5 HOH A 206 606 191 HOH HOH . H 5 HOH A 207 607 124 HOH HOH . H 5 HOH A 208 608 145 HOH HOH . H 5 HOH A 209 609 58 HOH HOH . H 5 HOH A 210 610 127 HOH HOH . H 5 HOH A 211 611 81 HOH HOH . H 5 HOH A 212 612 202 HOH HOH . H 5 HOH A 213 613 93 HOH HOH . H 5 HOH A 214 614 105 HOH HOH . H 5 HOH A 215 615 149 HOH HOH . H 5 HOH A 216 616 164 HOH HOH . H 5 HOH A 217 617 153 HOH HOH . H 5 HOH A 218 618 16 HOH HOH . H 5 HOH A 219 619 218 HOH HOH . H 5 HOH A 220 620 150 HOH HOH . H 5 HOH A 221 621 36 HOH HOH . H 5 HOH A 222 622 236 HOH HOH . H 5 HOH A 223 623 242 HOH HOH . H 5 HOH A 224 624 231 HOH HOH . H 5 HOH A 225 625 78 HOH HOH . H 5 HOH A 226 626 194 HOH HOH . H 5 HOH A 227 627 225 HOH HOH . H 5 HOH A 228 628 129 HOH HOH . H 5 HOH A 229 629 166 HOH HOH . H 5 HOH A 230 630 156 HOH HOH . H 5 HOH A 231 631 264 HOH HOH . H 5 HOH A 232 632 245 HOH HOH . H 5 HOH A 233 633 228 HOH HOH . H 5 HOH A 234 634 239 HOH HOH . H 5 HOH A 235 635 136 HOH HOH . H 5 HOH A 236 636 43 HOH HOH . H 5 HOH A 237 637 101 HOH HOH . H 5 HOH A 238 638 232 HOH HOH . H 5 HOH A 239 639 183 HOH HOH . H 5 HOH A 240 640 167 HOH HOH . H 5 HOH A 241 641 131 HOH HOH . H 5 HOH A 242 642 203 HOH HOH . H 5 HOH A 243 643 204 HOH HOH . H 5 HOH A 244 644 226 HOH HOH . H 5 HOH A 245 645 265 HOH HOH . H 5 HOH A 246 646 223 HOH HOH . H 5 HOH A 247 647 88 HOH HOH . H 5 HOH A 248 648 211 HOH HOH . H 5 HOH A 249 649 168 HOH HOH . H 5 HOH A 250 650 162 HOH HOH . H 5 HOH A 251 651 229 HOH HOH . H 5 HOH A 252 652 267 HOH HOH . H 5 HOH A 253 653 186 HOH HOH . H 5 HOH A 254 654 258 HOH HOH . H 5 HOH A 255 655 271 HOH HOH . H 5 HOH A 256 656 272 HOH HOH . H 5 HOH A 257 657 270 HOH HOH . H 5 HOH A 258 658 246 HOH HOH . H 5 HOH A 259 659 257 HOH HOH . H 5 HOH A 260 660 71 HOH HOH . H 5 HOH A 261 661 252 HOH HOH . H 5 HOH A 262 662 254 HOH HOH . H 5 HOH A 263 663 256 HOH HOH . H 5 HOH A 264 664 253 HOH HOH . H 5 HOH A 265 665 259 HOH HOH . H 5 HOH A 266 666 260 HOH HOH . H 5 HOH A 267 667 263 HOH HOH . H 5 HOH A 268 668 266 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . F 4 14.293 16.321 3 1 41.92 ? S DMS 305 A 1 HETATM 2 O O DMS . . . F 4 15.444 16.413 2.112 1 41.5 ? O DMS 305 A 1 HETATM 3 C C1 DMS . . . F 4 14.89 16.382 4.661 1 41.9 ? C1 DMS 305 A 1 HETATM 4 C C2 DMS . . . F 4 13.784 14.637 3.008 1 41.95 ? C2 DMS 305 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #