data_6TT7 # _model_server_result.job_id ksC3O0MTUz0oLKysfAAFNw _model_server_result.datetime_utc '2024-10-11 08:26:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tt7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"KA","auth_seq_id":301}' # _entry.id 6TT7 # _exptl.entry_id 6TT7 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 722.97 _entity.id 20 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TT7 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TT7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 28-meric _pdbx_struct_assembly.oligomeric_count 28 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 20 KA N N ? 20 LA N N ? 20 NA N N ? 20 RA N N ? 20 SA N N ? 20 TA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 219 B THR 176 1_555 CA MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc2 CA MG MG . B MG 601 1_555 DA O3B ADP . B ADP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc3 CA MG MG . B MG 601 1_555 DA O3A ADP . B ADP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc4 B OG1 THR 219 C THR 176 1_555 EA MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc5 EA MG MG . C MG 601 1_555 FA O2B ADP . C ADP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc6 GA MG MG . A MG 601 1_555 HA O2B ADP . A ADP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? metalc ? metalc7 GA MG MG . A MG 601 1_555 HA O2A ADP . A ADP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc8 GA MG MG . A MG 601 1_555 HA O3A ADP . A ADP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc9 GA MG MG . A MG 601 1_555 HA O3B ADP . A ADP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.82 ? # _chem_comp.formula 'C38 H75 O10 P' _chem_comp.formula_weight 722.97 _chem_comp.id LHG _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 LHG sing 491 n n O1 HO1 LHG sing 492 n n C1 C2 LHG sing 493 n n C1 HC11 LHG sing 494 n n C1 HC12 LHG sing 495 n n C2 O2 LHG sing 496 n n C2 C3 LHG sing 497 n n C2 HC2 LHG sing 498 n n O2 H02 LHG sing 499 n n C3 O3 LHG sing 500 n n C3 HC31 LHG sing 501 n n C3 HC32 LHG sing 502 n n O3 P LHG sing 503 n n P O4 LHG sing 504 n n P O5 LHG doub 505 n n P O6 LHG sing 506 n n O4 HO4 LHG sing 507 n n O6 C4 LHG sing 508 n n C4 C5 LHG sing 509 n n C4 HC41 LHG sing 510 n n C4 HC42 LHG sing 511 n n C5 C6 LHG sing 512 n n C5 O7 LHG sing 513 n n C5 HC5 LHG sing 514 n n C6 O8 LHG sing 515 n n C6 HC61 LHG sing 516 n n C6 HC62 LHG sing 517 n n O7 C7 LHG sing 518 n n C7 O9 LHG doub 519 n n C7 C8 LHG sing 520 n n C8 C9 LHG sing 521 n n C8 HC81 LHG sing 522 n n C8 HC82 LHG sing 523 n n C9 C10 LHG sing 524 n n C9 HC91 LHG sing 525 n n C9 HC92 LHG sing 526 n n C10 C11 LHG sing 527 n n C10 H101 LHG sing 528 n n C10 H102 LHG sing 529 n n O8 C23 LHG sing 530 n n C23 O10 LHG doub 531 n n C23 C24 LHG sing 532 n n C24 C25 LHG sing 533 n n C24 H241 LHG sing 534 n n C24 H242 LHG sing 535 n n C11 C12 LHG sing 536 n n C11 H111 LHG sing 537 n n C11 H112 LHG sing 538 n n C12 C13 LHG sing 539 n n C12 H121 LHG sing 540 n n C12 H122 LHG sing 541 n n C13 C14 LHG sing 542 n n C13 H131 LHG sing 543 n n C13 H132 LHG sing 544 n n C14 C15 LHG sing 545 n n C14 H141 LHG sing 546 n n C14 H142 LHG sing 547 n n C15 C16 LHG sing 548 n n C15 H151 LHG sing 549 n n C15 H152 LHG sing 550 n n C16 C17 LHG sing 551 n n C16 H161 LHG sing 552 n n C16 H162 LHG sing 553 n n C17 C18 LHG sing 554 n n C17 H171 LHG sing 555 n n C17 H172 LHG sing 556 n n C18 C19 LHG sing 557 n n C18 H181 LHG sing 558 n n C18 H182 LHG sing 559 n n C19 C20 LHG sing 560 n n C19 H191 LHG sing 561 n n C19 H192 LHG sing 562 n n C20 C21 LHG sing 563 n n C20 H201 LHG sing 564 n n C20 H202 LHG sing 565 n n C21 C22 LHG sing 566 n n C21 H211 LHG sing 567 n n C21 H212 LHG sing 568 n n C22 H221 LHG sing 569 n n C22 H222 LHG sing 570 n n C22 H223 LHG sing 571 n n C25 C26 LHG sing 572 n n C25 H251 LHG sing 573 n n C25 H252 LHG sing 574 n n C26 C27 LHG sing 575 n n C26 H261 LHG sing 576 n n C26 H262 LHG sing 577 n n C27 C28 LHG sing 578 n n C27 H271 LHG sing 579 n n C27 H272 LHG sing 580 n n C28 C29 LHG sing 581 n n C28 H281 LHG sing 582 n n C28 H282 LHG sing 583 n n C29 C30 LHG sing 584 n n C29 H291 LHG sing 585 n n C29 H292 LHG sing 586 n n C30 C31 LHG sing 587 n n C30 H301 LHG sing 588 n n C30 H302 LHG sing 589 n n C31 C32 LHG sing 590 n n C31 H311 LHG sing 591 n n C31 H312 LHG sing 592 n n C32 C33 LHG sing 593 n n C32 H321 LHG sing 594 n n C32 H322 LHG sing 595 n n C33 C34 LHG sing 596 n n C33 H331 LHG sing 597 n n C33 H332 LHG sing 598 n n C34 C35 LHG sing 599 n n C34 H341 LHG sing 600 n n C34 H342 LHG sing 601 n n C35 C36 LHG sing 602 n n C35 H351 LHG sing 603 n n C35 H352 LHG sing 604 n n C36 C37 LHG sing 605 n n C36 H361 LHG sing 606 n n C36 H362 LHG sing 607 n n C37 C38 LHG sing 608 n n C37 H371 LHG sing 609 n n C37 H372 LHG sing 610 n n C38 H381 LHG sing 611 n n C38 H382 LHG sing 612 n n C38 H383 LHG sing 613 n n # _atom_sites.entry_id 6TT7 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code CA 18 MG B 1 601 599 MG MG . DA 19 ADP B 1 602 600 ADP ADP . EA 18 MG C 1 601 599 MG MG . FA 19 ADP C 1 602 600 ADP ADP . GA 18 MG A 1 601 599 MG MG . HA 19 ADP A 1 602 600 ADP ADP . IA 19 ADP D 1 600 600 ADP ADP . JA 19 ADP F 1 600 600 ADP ADP . KA 20 LHG K 1 301 301 LHG LHG . LA 20 LHG K 1 302 101 LHG LHG . MA 21 P5S 2 1 201 201 P5S P5S . NA 20 LHG 2 1 202 101 LHG LHG . OA 22 CDL R 1 301 301 CDL CDL . PA 22 CDL R 1 302 401 CDL CDL . QA 22 CDL R 1 303 501 CDL CDL . RA 20 LHG R 1 304 201 LHG LHG . SA 20 LHG S 1 201 201 LHG LHG . TA 20 LHG S 1 202 301 LHG LHG . UA 23 S12 T 1 201 201 S12 LPS . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 LHG . . . KA 20 43.187 27.046 62.465 1 124.99 ? O1 LHG 301 K 1 HETATM 2 C C1 LHG . . . KA 20 44.226 27.574 61.644 1 121.11 ? C1 LHG 301 K 1 HETATM 3 C C2 LHG . . . KA 20 45.533 27.541 62.414 1 128.47 ? C2 LHG 301 K 1 HETATM 4 O O2 LHG . . . KA 20 45.574 28.556 63.394 1 139.65 ? O2 LHG 301 K 1 HETATM 5 C C3 LHG . . . KA 20 46.743 27.764 61.546 1 114.61 ? C3 LHG 301 K 1 HETATM 6 O O3 LHG . . . KA 20 47.54 26.693 61.977 1 108.99 ? O3 LHG 301 K 1 HETATM 7 P P LHG . . . KA 20 48.562 26.873 63.201 1 113.42 ? P LHG 301 K 1 HETATM 8 O O4 LHG . . . KA 20 48.839 28.329 63.338 1 101.76 ? O4 LHG 301 K 1 HETATM 9 O O5 LHG . . . KA 20 48.149 25.826 64.171 1 156.58 ? O5 LHG 301 K 1 HETATM 10 O O6 LHG . . . KA 20 49.88 26.33 62.35 1 100.96 ? O6 LHG 301 K 1 HETATM 11 C C4 LHG . . . KA 20 51.06 27.068 62.352 1 95.1 ? C4 LHG 301 K 1 HETATM 12 C C5 LHG . . . KA 20 51.464 27.199 60.857 1 112.11 ? C5 LHG 301 K 1 HETATM 13 C C6 LHG . . . KA 20 50.497 26.544 59.865 1 115.24 ? C6 LHG 301 K 1 HETATM 14 O O7 LHG . . . KA 20 51.605 28.592 60.494 1 109.89 ? O7 LHG 301 K 1 HETATM 15 C C7 LHG . . . KA 20 50.776 29.499 61.1 1 109.04 ? C7 LHG 301 K 1 HETATM 16 O O9 LHG . . . KA 20 49.585 29.568 60.834 1 115.3 ? O9 LHG 301 K 1 HETATM 17 C C8 LHG . . . KA 20 51.591 30.664 61.498 1 98.03 ? C8 LHG 301 K 1 HETATM 18 C C9 LHG . . . KA 20 51.917 31.47 60.266 1 100.6 ? C9 LHG 301 K 1 HETATM 19 C C10 LHG . . . KA 20 53.369 31.287 59.896 1 115.99 ? C10 LHG 301 K 1 HETATM 20 O O8 LHG . . . KA 20 50.781 27.225 58.629 1 109.31 ? O8 LHG 301 K 1 HETATM 21 C C23 LHG . . . KA 20 51.543 26.574 57.696 1 96.02 ? C23 LHG 301 K 1 HETATM 22 O O10 LHG . . . KA 20 52.652 26.154 57.977 1 80.02 ? O10 LHG 301 K 1 HETATM 23 C C24 LHG . . . KA 20 51.012 26.381 56.293 1 102.59 ? C24 LHG 301 K 1 HETATM 24 C C11 LHG . . . KA 20 53.566 32.333 58.832 1 117.31 ? C11 LHG 301 K 1 HETATM 25 C C12 LHG . . . KA 20 53.309 31.737 57.49 1 104.4 ? C12 LHG 301 K 1 HETATM 26 C C13 LHG . . . KA 20 54.04 32.584 56.476 1 103.42 ? C13 LHG 301 K 1 HETATM 27 C C14 LHG . . . KA 20 53.72 32.161 55.068 1 114.41 ? C14 LHG 301 K 1 HETATM 28 C C15 LHG . . . KA 20 54.479 33.12 54.175 1 129.92 ? C15 LHG 301 K 1 HETATM 29 C C16 LHG . . . KA 20 53.958 32.997 52.768 1 120.13 ? C16 LHG 301 K 1 HETATM 30 C C25 LHG . . . KA 20 51.925 26.794 55.149 1 141.35 ? C25 LHG 301 K 1 HETATM 31 C C26 LHG . . . KA 20 52.714 28.101 55.298 1 150.14 ? C26 LHG 301 K 1 HETATM 32 C C27 LHG . . . KA 20 52.538 28.781 53.955 1 114.87 ? C27 LHG 301 K 1 HETATM 33 C C28 LHG . . . KA 20 53.328 28.216 52.804 1 106.96 ? C28 LHG 301 K 1 HETATM 34 C C29 LHG . . . KA 20 52.436 28.36 51.571 1 105.32 ? C29 LHG 301 K 1 HETATM 35 C C30 LHG . . . KA 20 53.134 28.468 50.224 1 116.35 ? C30 LHG 301 K 1 HETATM 36 C C31 LHG . . . KA 20 53.042 27.246 49.322 1 139.73 ? C31 LHG 301 K 1 HETATM 37 C C32 LHG . . . KA 20 53.399 27.462 47.851 1 121.07 ? C32 LHG 301 K 1 HETATM 38 C C33 LHG . . . KA 20 54.223 26.262 47.395 1 109.87 ? C33 LHG 301 K 1 HETATM 39 C C34 LHG . . . KA 20 53.64 25.445 46.256 1 117.47 ? C34 LHG 301 K 1 HETATM 40 C C35 LHG . . . KA 20 54.595 24.353 45.808 1 118.21 ? C35 LHG 301 K 1 HETATM 41 C C36 LHG . . . KA 20 54.57 23.225 46.83 1 121.96 ? C36 LHG 301 K 1 HETATM 42 C C37 LHG . . . KA 20 53.312 22.434 46.592 1 138.68 ? C37 LHG 301 K 1 HETATM 43 C C38 LHG . . . KA 20 53.493 20.929 46.605 1 124.75 ? C38 LHG 301 K 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 44 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 43 #