data_6TU9
#
_model_server_result.job_id            SNAMt0KDquyIfxeBRFRrpg 
_model_server_result.datetime_utc      '2025-03-02 06:32:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6tu9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":801}' 
#
_entry.id    6TU9 
#
_exptl.entry_id    6TU9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              532.559 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.045 
_cell.angle_gamma         90 
_cell.entry_id            6TU9 
_cell.length_a            54.29 
_cell.length_b            85.969 
_cell.length_c            72.98 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6TU9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C29 H27 F3 N6 O' 
_chem_comp.formula_weight    532.559 
_chem_comp.id                0LI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Ponatinib 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C84 0LI doub 1 n y 
N1 C1 0LI sing 2 n y 
N3 C20 0LI sing 3 n n 
N3 C21 0LI sing 4 n n 
N3 C24 0LI sing 5 n n 
C4 C5 0LI sing 6 n n 
C4 C3 0LI trip 7 n n 
C5 C6 0LI doub 8 n y 
C5 C10 0LI sing 9 n y 
C6 C7 0LI sing 10 n y 
C6 C11 0LI sing 11 n n 
C7 C8 0LI doub 12 n y 
C7 H7 0LI sing 13 n n 
C8 C9 0LI sing 14 n y 
C8 H8 0LI sing 15 n n 
C10 C9 0LI doub 16 n y 
C10 H10 0LI sing 17 n n 
C13 N2 0LI sing 18 n n 
C13 C14 0LI doub 19 n y 
C13 C18 0LI sing 20 n y 
C15 C14 0LI sing 21 n y 
C15 C16 0LI doub 22 n y 
C15 H15 0LI sing 23 n n 
C17 C16 0LI sing 24 n y 
C17 C18 0LI doub 25 n y 
C17 C19 0LI sing 26 n n 
C20 C16 0LI sing 27 n n 
C20 H20 0LI sing 28 n n 
C20 H20A 0LI sing 29 n n 
C21 C22 0LI sing 30 n n 
C21 H21 0LI sing 31 n n 
C21 H21A 0LI sing 32 n n 
C22 N4 0LI sing 33 n n 
C22 H22 0LI sing 34 n n 
C22 H22A 0LI sing 35 n n 
C24 C23 0LI sing 36 n n 
C24 H24 0LI sing 37 n n 
C24 H24A 0LI sing 38 n n 
C81 C82 0LI doub 39 n y 
C81 C84 0LI sing 40 n y 
C81 H81 0LI sing 41 n n 
C82 C83 0LI sing 42 n y 
C82 H82 0LI sing 43 n n 
C83 N81 0LI doub 44 n y 
C83 H83 0LI sing 45 n n 
N81 N82 0LI sing 46 n y 
N82 C84 0LI sing 47 n y 
N82 C2 0LI sing 48 n y 
C1 C2 0LI doub 49 n y 
C1 H1 0LI sing 50 n n 
C2 C3 0LI sing 51 n n 
C9 C12 0LI sing 52 n n 
C11 H11 0LI sing 53 n n 
C11 H11A 0LI sing 54 n n 
C11 H11B 0LI sing 55 n n 
C12 O1 0LI doub 56 n n 
C12 N2 0LI sing 57 n n 
N2 HN2 0LI sing 58 n n 
C14 H14 0LI sing 59 n n 
C18 H18 0LI sing 60 n n 
C19 F1 0LI sing 61 n n 
C19 F2 0LI sing 62 n n 
C19 F3 0LI sing 63 n n 
C23 N4 0LI sing 64 n n 
C23 H23 0LI sing 65 n n 
C23 H23A 0LI sing 66 n n 
C25 N4 0LI sing 67 n n 
C25 H25 0LI sing 68 n n 
C25 H25A 0LI sing 69 n n 
C25 H25B 0LI sing 70 n n 
#
_atom_sites.entry_id                     6TU9 
_atom_sites.fract_transf_matrix[1][1]    0.01842 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000336 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011632 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013705 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 0LI A 1 801 1 0LI PON . 
D 2 0LI B 1 801 2 0LI PON . 
E 3 HOH A 1 901 94 HOH HOH . 
E 3 HOH A 2 902 67 HOH HOH . 
E 3 HOH A 3 903 8 HOH HOH . 
E 3 HOH A 4 904 45 HOH HOH . 
E 3 HOH A 5 905 9 HOH HOH . 
E 3 HOH A 6 906 36 HOH HOH . 
E 3 HOH A 7 907 6 HOH HOH . 
E 3 HOH A 8 908 21 HOH HOH . 
E 3 HOH A 9 909 5 HOH HOH . 
E 3 HOH A 10 910 19 HOH HOH . 
E 3 HOH A 11 911 52 HOH HOH . 
E 3 HOH A 12 912 20 HOH HOH . 
E 3 HOH A 13 913 7 HOH HOH . 
E 3 HOH A 14 914 89 HOH HOH . 
E 3 HOH A 15 915 88 HOH HOH . 
E 3 HOH A 16 916 74 HOH HOH . 
E 3 HOH A 17 917 57 HOH HOH . 
E 3 HOH A 18 918 4 HOH HOH . 
E 3 HOH A 19 919 90 HOH HOH . 
E 3 HOH A 20 920 79 HOH HOH . 
E 3 HOH A 21 921 38 HOH HOH . 
E 3 HOH A 22 922 41 HOH HOH . 
E 3 HOH A 23 923 47 HOH HOH . 
E 3 HOH A 24 924 39 HOH HOH . 
E 3 HOH A 25 925 48 HOH HOH . 
E 3 HOH A 26 926 63 HOH HOH . 
E 3 HOH A 27 927 42 HOH HOH . 
E 3 HOH A 28 928 50 HOH HOH . 
E 3 HOH A 29 929 37 HOH HOH . 
E 3 HOH A 30 930 2 HOH HOH . 
E 3 HOH A 31 931 68 HOH HOH . 
E 3 HOH A 32 932 22 HOH HOH . 
E 3 HOH A 33 933 51 HOH HOH . 
E 3 HOH A 34 934 83 HOH HOH . 
E 3 HOH A 35 935 1 HOH HOH . 
E 3 HOH A 36 936 3 HOH HOH . 
E 3 HOH A 37 937 49 HOH HOH . 
E 3 HOH A 38 938 66 HOH HOH . 
E 3 HOH A 39 939 10 HOH HOH . 
E 3 HOH A 40 940 56 HOH HOH . 
E 3 HOH A 41 941 77 HOH HOH . 
E 3 HOH A 42 942 72 HOH HOH . 
E 3 HOH A 43 943 40 HOH HOH . 
E 3 HOH A 44 944 53 HOH HOH . 
E 3 HOH A 45 945 87 HOH HOH . 
E 3 HOH A 46 946 76 HOH HOH . 
E 3 HOH A 47 947 78 HOH HOH . 
E 3 HOH A 48 948 55 HOH HOH . 
F 3 HOH B 1 901 12 HOH HOH . 
F 3 HOH B 2 902 29 HOH HOH . 
F 3 HOH B 3 903 16 HOH HOH . 
F 3 HOH B 4 904 28 HOH HOH . 
F 3 HOH B 5 905 35 HOH HOH . 
F 3 HOH B 6 906 27 HOH HOH . 
F 3 HOH B 7 907 23 HOH HOH . 
F 3 HOH B 8 908 24 HOH HOH . 
F 3 HOH B 9 909 18 HOH HOH . 
F 3 HOH B 10 910 15 HOH HOH . 
F 3 HOH B 11 911 54 HOH HOH . 
F 3 HOH B 12 912 65 HOH HOH . 
F 3 HOH B 13 913 69 HOH HOH . 
F 3 HOH B 14 914 43 HOH HOH . 
F 3 HOH B 15 915 14 HOH HOH . 
F 3 HOH B 16 916 17 HOH HOH . 
F 3 HOH B 17 917 62 HOH HOH . 
F 3 HOH B 18 918 58 HOH HOH . 
F 3 HOH B 19 919 84 HOH HOH . 
F 3 HOH B 20 920 85 HOH HOH . 
F 3 HOH B 21 921 32 HOH HOH . 
F 3 HOH B 22 922 82 HOH HOH . 
F 3 HOH B 23 923 59 HOH HOH . 
F 3 HOH B 24 924 11 HOH HOH . 
F 3 HOH B 25 925 93 HOH HOH . 
F 3 HOH B 26 926 13 HOH HOH . 
F 3 HOH B 27 927 61 HOH HOH . 
F 3 HOH B 28 928 64 HOH HOH . 
F 3 HOH B 29 929 46 HOH HOH . 
F 3 HOH B 30 930 44 HOH HOH . 
F 3 HOH B 31 931 60 HOH HOH . 
F 3 HOH B 32 932 92 HOH HOH . 
F 3 HOH B 33 933 33 HOH HOH . 
F 3 HOH B 34 934 75 HOH HOH . 
F 3 HOH B 35 935 30 HOH HOH . 
F 3 HOH B 36 936 86 HOH HOH . 
F 3 HOH B 37 937 26 HOH HOH . 
F 3 HOH B 38 938 34 HOH HOH . 
F 3 HOH B 39 939 91 HOH HOH . 
F 3 HOH B 40 940 71 HOH HOH . 
F 3 HOH B 41 941 70 HOH HOH . 
F 3 HOH B 42 942 31 HOH HOH . 
F 3 HOH B 43 943 73 HOH HOH . 
F 3 HOH B 44 944 80 HOH HOH . 
F 3 HOH B 45 945 25 HOH HOH . 
F 3 HOH B 46 946 81 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 0LI . . . C 2 -22.053 10.093 -13.796 1 37.24 ? N1 0LI 801 A 1 
HETATM 2 N N3 0LI . . . C 2 -18.143 15.194 0.959 1 36.19 ? N3 0LI 801 A 1 
HETATM 3 C C4 0LI . . . C 2 -18.544 11.482 -10.711 1 30.05 ? C4 0LI 801 A 1 
HETATM 4 C C5 0LI . . . C 2 -17.639 11.838 -9.658 1 29.87 ? C5 0LI 801 A 1 
HETATM 5 C C6 0LI . . . C 2 -16.269 12.031 -9.9 1 43.35 ? C6 0LI 801 A 1 
HETATM 6 C C7 0LI . . . C 2 -15.475 12.469 -8.842 1 40.13 ? C7 0LI 801 A 1 
HETATM 7 C C8 0LI . . . C 2 -16.006 12.706 -7.588 1 41.68 ? C8 0LI 801 A 1 
HETATM 8 C C10 0LI . . . C 2 -18.164 12.05 -8.389 1 27.97 ? C10 0LI 801 A 1 
HETATM 9 C C13 0LI . . . C 2 -17.798 13.23 -3.663 1 38.18 ? C13 0LI 801 A 1 
HETATM 10 C C15 0LI . . . C 2 -17.261 13.945 -1.439 1 36.19 ? C15 0LI 801 A 1 
HETATM 11 C C17 0LI . . . C 2 -19.533 13.381 -1.983 1 30.23 ? C17 0LI 801 A 1 
HETATM 12 C C20 0LI . . . C 2 -18.99 14.146 0.373 1 35.66 ? C20 0LI 801 A 1 
HETATM 13 C C21 0LI . . . C 2 -18.318 15.267 2.418 1 41.33 ? C21 0LI 801 A 1 
HETATM 14 C C22 0LI . . . C 2 -17.463 16.379 3.013 1 40.18 ? C22 0LI 801 A 1 
HETATM 15 C C24 0LI . . . C 2 -18.455 16.496 0.362 1 30.6 ? C24 0LI 801 A 1 
HETATM 16 C C81 0LI . . . C 2 -21.805 11.75 -15.655 1 37.68 ? C81 0LI 801 A 1 
HETATM 17 C C82 0LI . . . C 2 -21.05 12.803 -16.063 1 45.08 ? C82 0LI 801 A 1 
HETATM 18 C C83 0LI . . . C 2 -20.023 13.263 -15.218 1 45.94 ? C83 0LI 801 A 1 
HETATM 19 N N81 0LI . . . C 2 -19.699 12.751 -14.013 1 41.46 ? N81 0LI 801 A 1 
HETATM 20 N N82 0LI . . . C 2 -20.491 11.685 -13.67 1 39.71 ? N82 0LI 801 A 1 
HETATM 21 C C84 0LI . . . C 2 -21.528 11.147 -14.412 1 40.09 ? C84 0LI 801 A 1 
HETATM 22 C C1 0LI . . . C 2 -21.333 9.952 -12.634 1 36.84 ? C1 0LI 801 A 1 
HETATM 23 C C2 0LI . . . C 2 -20.361 10.915 -12.514 1 31.92 ? C2 0LI 801 A 1 
HETATM 24 C C3 0LI . . . C 2 -19.378 11.208 -11.525 1 32.4 ? C3 0LI 801 A 1 
HETATM 25 C C9 0LI . . . C 2 -17.361 12.512 -7.352 1 32.58 ? C9 0LI 801 A 1 
HETATM 26 C C11 0LI . . . C 2 -15.662 11.722 -11.245 1 45.14 ? C11 0LI 801 A 1 
HETATM 27 C C12 0LI . . . C 2 -18.091 12.899 -6.105 1 35.13 ? C12 0LI 801 A 1 
HETATM 28 O O1 0LI . . . C 2 -19.288 13.164 -6.148 1 30.69 ? O1 0LI 801 A 1 
HETATM 29 N N2 0LI . . . C 2 -17.354 12.937 -4.971 1 33.1 ? N2 0LI 801 A 1 
HETATM 30 C C14 0LI . . . C 2 -16.866 13.661 -2.732 1 39.65 ? C14 0LI 801 A 1 
HETATM 31 C C16 0LI . . . C 2 -18.589 13.817 -1.047 1 37.25 ? C16 0LI 801 A 1 
HETATM 32 C C18 0LI . . . C 2 -19.131 13.092 -3.281 1 25.21 ? C18 0LI 801 A 1 
HETATM 33 C C19 0LI . . . C 2 -20.994 13.185 -1.67 1 36.58 ? C19 0LI 801 A 1 
HETATM 34 F F1 0LI . . . C 2 -21.194 12.372 -0.63 1 35.3 ? F1 0LI 801 A 1 
HETATM 35 F F2 0LI . . . C 2 -21.68 12.686 -2.696 1 36.79 ? F2 0LI 801 A 1 
HETATM 36 F F3 0LI . . . C 2 -21.598 14.3 -1.372 1 34.78 ? F3 0LI 801 A 1 
HETATM 37 C C23 0LI . . . C 2 -17.579 17.568 0.95 1 37.17 ? C23 0LI 801 A 1 
HETATM 38 C C25 0LI . . . C 2 -16.957 18.735 2.957 1 38.24 ? C25 0LI 801 A 1 
HETATM 39 N N4 0LI . . . C 2 -17.78 17.664 2.392 1 35.8 ? N4 0LI 801 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           39 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           464 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           39 
#