data_6TUL # _model_server_result.job_id VuXzBD51a2CyHztVjY3x-g _model_server_result.datetime_utc '2024-11-01 02:18:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6tul # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 6TUL # _exptl.entry_id 6TUL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6TUL _cell.length_a 53.537 _cell.length_b 69.244 _cell.length_c 106.517 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TUL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 HHH CYS 22 1_555 A SG CYS 100 HHH CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 151 HHH CYS 140 1_555 A SG CYS 207 HHH CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf3 B SG CYS 26 LLL CYS 23 1_555 B SG CYS 93 LLL CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 B SG CYS 142 LLL CYS 135 1_555 B SG CYS 201 LLL CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 251 n n O1 H1 P6G sing 252 n n C2 C3 P6G sing 253 n n C2 H21 P6G sing 254 n n C2 H22 P6G sing 255 n n C3 O4 P6G sing 256 n n C3 H31 P6G sing 257 n n C3 H32 P6G sing 258 n n O4 C5 P6G sing 259 n n C5 C6 P6G sing 260 n n C5 H51 P6G sing 261 n n C5 H52 P6G sing 262 n n C6 O7 P6G sing 263 n n C6 H61 P6G sing 264 n n C6 H62 P6G sing 265 n n O7 C8 P6G sing 266 n n C8 C9 P6G sing 267 n n C8 H81 P6G sing 268 n n C8 H82 P6G sing 269 n n C9 O10 P6G sing 270 n n C9 H91 P6G sing 271 n n C9 H92 P6G sing 272 n n O10 C11 P6G sing 273 n n C11 C12 P6G sing 274 n n C11 H111 P6G sing 275 n n C11 H112 P6G sing 276 n n C12 O13 P6G sing 277 n n C12 H121 P6G sing 278 n n C12 H122 P6G sing 279 n n O13 C14 P6G sing 280 n n C14 C15 P6G sing 281 n n C14 H141 P6G sing 282 n n C14 H142 P6G sing 283 n n C15 O16 P6G sing 284 n n C15 H151 P6G sing 285 n n C15 H152 P6G sing 286 n n O16 C17 P6G sing 287 n n C17 C18 P6G sing 288 n n C17 H171 P6G sing 289 n n C17 H172 P6G sing 290 n n C18 O19 P6G sing 291 n n C18 H181 P6G sing 292 n n C18 H182 P6G sing 293 n n O19 H19 P6G sing 294 n n # _atom_sites.entry_id 6TUL _atom_sites.fract_transf_matrix[1][1] 0.018679 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014442 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009388 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PG4 HHH 1 301 101 PG4 PG4 . D 4 P6G HHH 1 302 401 P6G P6G . E 5 MLT HHH 1 303 1 MLT 8KJ . F 5 MLT HHH 1 304 2 MLT MLT . G 6 PGE LLL 1 301 2 PGE PGE . H 6 PGE LLL 1 302 301 PGE PGE . I 3 PG4 LLL 1 303 501 PG4 PG4 . J 7 HOH HHH 1 401 4 HOH HOH . J 7 HOH HHH 2 402 41 HOH HOH . J 7 HOH HHH 3 403 14 HOH HOH . J 7 HOH HHH 4 404 37 HOH HOH . J 7 HOH HHH 5 405 30 HOH HOH . J 7 HOH HHH 6 406 43 HOH HOH . J 7 HOH HHH 7 407 25 HOH HOH . J 7 HOH HHH 8 408 45 HOH HOH . J 7 HOH HHH 9 409 42 HOH HOH . J 7 HOH HHH 10 410 38 HOH HOH . J 7 HOH HHH 11 411 20 HOH HOH . J 7 HOH HHH 12 412 19 HOH HOH . J 7 HOH HHH 13 413 22 HOH HOH . J 7 HOH HHH 14 414 28 HOH HOH . J 7 HOH HHH 15 415 29 HOH HOH . K 7 HOH LLL 1 401 26 HOH HOH . K 7 HOH LLL 2 402 33 HOH HOH . K 7 HOH LLL 3 403 10 HOH HOH . K 7 HOH LLL 4 404 6 HOH HOH . K 7 HOH LLL 5 405 36 HOH HOH . K 7 HOH LLL 6 406 31 HOH HOH . K 7 HOH LLL 7 407 5 HOH HOH . K 7 HOH LLL 8 408 8 HOH HOH . K 7 HOH LLL 9 409 18 HOH HOH . K 7 HOH LLL 10 410 7 HOH HOH . K 7 HOH LLL 11 411 9 HOH HOH . K 7 HOH LLL 12 412 17 HOH HOH . K 7 HOH LLL 13 413 2 HOH HOH . K 7 HOH LLL 14 414 23 HOH HOH . K 7 HOH LLL 15 415 24 HOH HOH . K 7 HOH LLL 16 416 34 HOH HOH . K 7 HOH LLL 17 417 13 HOH HOH . K 7 HOH LLL 18 418 35 HOH HOH . K 7 HOH LLL 19 419 1 HOH HOH . K 7 HOH LLL 20 420 32 HOH HOH . K 7 HOH LLL 21 421 44 HOH HOH . K 7 HOH LLL 22 422 15 HOH HOH . K 7 HOH LLL 23 423 3 HOH HOH . K 7 HOH LLL 24 424 40 HOH HOH . K 7 HOH LLL 25 425 39 HOH HOH . K 7 HOH LLL 26 426 21 HOH HOH . K 7 HOH LLL 27 427 16 HOH HOH . K 7 HOH LLL 28 428 11 HOH HOH . K 7 HOH LLL 29 429 27 HOH HOH . K 7 HOH LLL 30 430 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P6G . . . D 4 5.177 9.001 8.455 1 83.19 ? O1 P6G 302 HHH 1 HETATM 2 C C2 P6G . . . D 4 5.128 8.982 9.888 1 83.01 ? C2 P6G 302 HHH 1 HETATM 3 C C3 P6G . . . D 4 3.922 8.186 10.379 1 82.69 ? C3 P6G 302 HHH 1 HETATM 4 O O4 P6G . . . D 4 2.893 8.171 9.387 1 82.4 ? O4 P6G 302 HHH 1 HETATM 5 C C5 P6G . . . D 4 1.874 7.208 9.66 1 81.78 ? C5 P6G 302 HHH 1 HETATM 6 C C6 P6G . . . D 4 0.986 7.035 8.436 1 81.53 ? C6 P6G 302 HHH 1 HETATM 7 O O7 P6G . . . D 4 -0.387 6.919 8.819 1 81.22 ? O7 P6G 302 HHH 1 HETATM 8 C C8 P6G . . . D 4 -1.177 6.138 7.918 1 80.24 ? C8 P6G 302 HHH 1 HETATM 9 C C9 P6G . . . D 4 -1.218 6.768 6.528 1 79.82 ? C9 P6G 302 HHH 1 HETATM 10 O O10 P6G . . . D 4 -1.612 8.139 6.611 1 79.49 ? O10 P6G 302 HHH 1 HETATM 11 C C11 P6G . . . D 4 -1.13 8.933 5.522 1 79.05 ? C11 P6G 302 HHH 1 HETATM 12 C C12 P6G . . . D 4 0.227 9.519 5.893 1 78.41 ? C12 P6G 302 HHH 1 HETATM 13 O O13 P6G . . . D 4 0.589 10.579 5.012 1 77.86 ? O13 P6G 302 HHH 1 HETATM 14 C C14 P6G . . . D 4 1.978 10.9 5.11 1 77.74 ? C14 P6G 302 HHH 1 HETATM 15 C C15 P6G . . . D 4 2.78 10.067 4.113 1 77.51 ? C15 P6G 302 HHH 1 HETATM 16 O O16 P6G . . . D 4 4.078 9.742 4.62 1 76.72 ? O16 P6G 302 HHH 1 HETATM 17 C C17 P6G . . . D 4 4.965 10.856 4.767 1 77.73 ? C17 P6G 302 HHH 1 HETATM 18 C C18 P6G . . . D 4 5.477 11.333 3.411 1 77.83 ? C18 P6G 302 HHH 1 HETATM 19 O O19 P6G . . . D 4 6.511 12.303 3.608 1 78.28 ? O19 P6G 302 HHH 1 HETATM 20 H H1 P6G . . . D 4 5.768 9.386 8.136 0 50.56 ? H1 P6G 302 HHH 1 HETATM 21 H H21 P6G . . . D 4 6.043 8.531 10.277 1 82.98 ? H21 P6G 302 HHH 1 HETATM 22 H H22 P6G . . . D 4 5.07 10.005 10.266 1 82.98 ? H22 P6G 302 HHH 1 HETATM 23 H H31 P6G . . . D 4 4.236 7.167 10.611 1 82.57 ? H31 P6G 302 HHH 1 HETATM 24 H H32 P6G . . . D 4 3.536 8.637 11.296 1 82.67 ? H32 P6G 302 HHH 1 HETATM 25 H H51 P6G . . . D 4 2.329 6.247 9.905 1 81.66 ? H51 P6G 302 HHH 1 HETATM 26 H H52 P6G . . . D 4 1.274 7.536 10.511 1 81.67 ? H52 P6G 302 HHH 1 HETATM 27 H H61 P6G . . . D 4 1.111 7.901 7.791 1 81.49 ? H61 P6G 302 HHH 1 HETATM 28 H H62 P6G . . . D 4 1.302 6.151 7.878 1 81.51 ? H62 P6G 302 HHH 1 HETATM 29 H H81 P6G . . . D 4 -0.768 5.127 7.849 1 80.37 ? H81 P6G 302 HHH 1 HETATM 30 H H82 P6G . . . D 4 -2.194 6.058 8.307 1 80.37 ? H82 P6G 302 HHH 1 HETATM 31 H H91 P6G . . . D 4 -0.235 6.685 6.06 1 79.7 ? H91 P6G 302 HHH 1 HETATM 32 H H92 P6G . . . D 4 -1.931 6.224 5.904 1 79.82 ? H92 P6G 302 HHH 1 HETATM 33 H H111 P6G . . . D 4 -1.035 8.323 4.621 1 78.99 ? H111 P6G 302 HHH 1 HETATM 34 H H112 P6G . . . D 4 -1.836 9.736 5.307 1 78.94 ? H112 P6G 302 HHH 1 HETATM 35 H H121 P6G . . . D 4 0.198 9.891 6.919 1 78.42 ? H121 P6G 302 HHH 1 HETATM 36 H H122 P6G . . . D 4 0.98 8.732 5.838 1 78.31 ? H122 P6G 302 HHH 1 HETATM 37 H H141 P6G . . . D 4 2.122 11.961 4.897 1 77.72 ? H141 P6G 302 HHH 1 HETATM 38 H H142 P6G . . . D 4 2.34 10.709 6.124 1 77.72 ? H142 P6G 302 HHH 1 HETATM 39 H H151 P6G . . . D 4 2.241 9.141 3.898 1 77.36 ? H151 P6G 302 HHH 1 HETATM 40 H H152 P6G . . . D 4 2.866 10.618 3.177 1 77.29 ? H152 P6G 302 HHH 1 HETATM 41 H H171 P6G . . . D 4 4.462 11.68 5.276 1 77.51 ? H171 P6G 302 HHH 1 HETATM 42 H H172 P6G . . . D 4 5.814 10.557 5.384 1 77.51 ? H172 P6G 302 HHH 1 HETATM 43 H H181 P6G . . . D 4 5.867 10.486 2.843 1 77.8 ? H181 P6G 302 HHH 1 HETATM 44 H H182 P6G . . . D 4 4.667 11.786 2.837 1 77.89 ? H182 P6G 302 HHH 1 HETATM 45 H H19 P6G . . . D 4 6.163 13.046 4.119 1 78.14 ? H19 P6G 302 HHH 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 45 #